Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03496
- Subject:
- XR_001751343.2
- Aligned Length:
- 1722
- Identities:
- 898
- Gaps:
- 818
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTCCATTGTCATAGCCCTTCCCCTAGGCCGGGAACCCCTCCCCCCCACCAGCCCCAGTTCCTTTATCCCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCAACCTCCCCGCCGACCCGCGGTCCAGGCCTCGGTCTCTCTCTTCGGCGGCGAGCCGCGGCCCAGACCCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGAGGACACTTGTCGGCACGTTCTCACCCCTGTCATCTCAGCCCCCTGCCTAGCTCCACCCCAGGCTTGGGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCGGCCCCTGACGGCCCATTGTCCGCGGGCCCAGCCCCCGCGCTGAACGCACGCTCGCCCTTGCCCCTAACCA 296
Query 1 ----------------------------------ATGCAGCCCTCAGGCTGGGCGGCCGCCAGGGAGGCGGCGG 40
||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCGCGTCTACCCCGGCAACGCGCAGTGACCTGGGATGCAGCCCTCAGGCTGGGCGGCCGCCAGGGAGGCGGCGG 370
Query 41 GCCGCGACATGCTGGCCGCCGACCTCCGGTGCAGCCTCTTCGCCTCGGCCCTGCAGAGCTACAAGCGCGACTCG 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCCGCGACATGCTGGCCGCCGACCTCCGGTGCAGCCTCTTCGCCTCGGCCCTGCAGAGCTACAAGCGCGACTCG 444
Query 115 GTGCTGCGGCCCTTCCCCGCGTCCTACGCCCGCGGCGACTGTAAGGACTTTGAAGCCCTGCTTGCAGATGCCAG 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTGCTGCGGCCCTTCCCCGCGTCCTACGCCCGCGGCGACTGTAAGGACTTTGAAGCCCTGCTTGCAGATGCCAG 518
Query 189 CAAGTTACCTAACCTGAAAGAACTTCTCCAGTCCTCCGGAGACAACCACAAACGGGCCTGGGACCTGGTGAGCT 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAAGTTACCTAACCTGAAAGAACTTCTCCAGTCCTCCGGAGACAACCACAAACGGGCCTGGGACCT-------- 584
Query 263 GGATTTTATCCTCAAAGGTCCTGACAATCCACAGTGCAGGGAAGGCAGAGTTTGAAAAGATCCAAAAGCTGACT 336
|||||||||||||||||||||||||
Sbjct 585 -------------------------------------------------GTTTGAAAAGATCCAAAAGCTGACT 609
Query 337 GGGGCTCCTCACACGCCTGTTCCTGCACCGGACTTCCTGTTTGAAATTGAGTACTTTGACCCAGCCAACGCCAA 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 610 GGGGCTCCTCACACGCCTGTTCCTGCACCGGACTTCCTGTTTGAAATTGAGTACTTTGACCCAGCCAACGCCAA 683
Query 411 ATTTTATGAGACCAAAGGAGAACGAGACCTAATCTATGCATTTCATGGTAGCCGCCTAGAAAACTTCCATTCCA 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 684 ATTTTATGAGACCAAAGGAGAACGAGACCTAATCTATGCATTTCATGGTAGCCGCCTAGAAAACTTCCATTCCA 757
Query 485 TTATCCACAATGGCCTGCACTGCCATCTGAACAAGACATCCTTGTTCGGAGAGGGGACCTACCTCACCAGTGAC 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 758 TTATCCACAATGGCCTGCACTGCCATCTGAACAAGACATCCTTGTTCGGAGAGGGGACCTACCTCACCAGTGAC 831
Query 559 TTGAGCCTGGCCCTCATATACAGCCCCCATGGCCATGGGTGGCAGCACAGCCTCCTCGGCCCCATCCTTAGCTG 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 832 TTGAGCCTGGCCCTCATATACAGCCCCCATGGCCATGGGTGGCAGCACAGCCTCCTCGGCCCCATCCTTAGCTG 905
Query 633 TGTGGCCGTGTGTGAGGTCATTGACCATCCGGACGTCAAGTGCCAAACCAAGAAGAAGGATTCCAAGGAGATAG 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 906 TGTGGCCGTGTGTGAGGTCATTGACCATCCGGACGTCAAGTGCCAAACCAAGAAGAAGGATTCCAAGGAGATAG 979
Query 707 ATCGCAGACGAGCGAGAATCAAACATAGTGAAGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCACCAATAAC 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 980 ATCGCAGACGAGCGAGAATCAAACATAGTGAAGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCACCAATAAC 1053
Query 781 CAGCTGCTGCGAGTGAAGTACCTCCTGGTGTATTCACAGAAGCCACCCAAGAGCAGGGCTTCGAGCCAGCTCTC 854
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1054 CAGCTGCTGCGAGTGAAGTACCTCCTGGTGTATTCACAGAAGCCACCCAAG---AGGGCTTCGAGCCAGCTCTC 1124
Query 855 CTGGTTTTCCAGCCATTGGTTTACCGTCATGATATCCCTGTATCTGCTGCTGCTGCTCATAG-----------T 917
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1125 CTGGTTTTCCAGCCATTGGTTTACCGTCATGATATCCCTGTATCTGCTGCTGCTGCTCATAGCACTGGGAATCT 1198
Query 918 GA----GTGTC---------ATCAACTCC------------TCT---------GCTTTCCA--ACA-----CTT 950
|| ||||| |..||..|| ||| || ||| ||| ||.
Sbjct 1199 GAAGAGGTGTCTGTGGCCAGAGTAAAGCCAGAGTGTGGCCATCTAAAGGGTGGGC---CCAGGACAAGGGCCTC 1269
Query 951 TTGGAA------TCGTGCGAAA--AGA----------------------------------------------- 969
.||||| | ||| |||| |||
Sbjct 1270 ATGGAAAGGAACT-GTG-GAAAGTAGAGAGGACCCACCTGCCATGCTGTGAGGACACCCAGGCCACATAGAGAG 1341
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1342 AGTGAGGCCACATGTAGGTTTTACAGCCAGAAGCCCCACTGAAAACCAAACCTGCAACCAGCATCAACTGCCAA 1415
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1416 ACATGTACTGAAGAGGCTGAGATGATTCCAGCACTTGTGGATGACTGCAACCACATGAGAGACCCAGAGCAAGA 1489
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1490 GCTACCTAGCTGAGCCCAGTTACTCCCAGAATCATGAGAGAACTATGTAATTGATTGTTATTACTATATAAGCC 1563
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1564 ACTAAGTTTACATATGATATGTTATGCAGCAGTAGACAGCTGGAACAGGAGCCAATAAACACCGAATGAATAAA 1637
Query 970 -------------------- 969
Sbjct 1638 TGTGGATAGGTCTGGTTGAA 1657
