Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03646
- Subject:
- NR_163918.1
- Aligned Length:
- 4486
- Identities:
- 438
- Gaps:
- 4048
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTGGCGCGCAGGACCGCGGGCATTTACCCGTGCTTTCCCAAGCCTGGAAGAACTCGTCATGCTCTTTGTAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGTGCTTCTGTTGCTCACAGAGTCTCGCTCTGGCCAGAGATTTTCTAAATAATGGTCAGGAATCTGCATTGAC 148
Query 1 -----------------------------------ATGATGTGGCAAAAGTATGCAGGAAGCAGGCGGTCAATG 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 149 AACTTGCCTTTGATGATTTTCAAGAGAGTTGTGCTATGATGTGGCAAAAGTATGCAGGAAGCAGGCGGTCAATG 222
Query 40 CCTCTGGGAGCAAGGATCCTTTTCCACGGTGTGTTCTATGCCGGGGGCTTTGCCATTGTGTATTACCTCATTCA 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCTCTGGGAGCAAGGATCCTTTTCCACGGTGTGTTCTATGCCGGGGGCTTTGCCATTGTGTATTACCTCATTCA 296
Query 114 AAAGTTTCATTCCAGGGCTTTATATTACAAGTTGGCAGTGGAGCAGCTGCAGAGCCATCCCGAGGCACAGGAAG 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AAAGTTTCATTCCAGGGCTTTATATTACAAGTTGGCAGTGGAGCAGCTGCAGAGCCATCCCGAGGCACAGGAAG 370
Query 188 CTCTGGGCCCTCCTCTCAACATCCATTATCTCAAGCTCATCGACAGGGAAAACTTCGTGGACATTGTTGATGCC 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTCTGGGCCCTCCTCTCAACATCCATTATCTCAAGCTCATCGACAGGGAAAACTTCGTGGACATTGTTGATGCC 444
Query 262 AAGTTGAAGATTCCTGTCTCTGGATCCAAATCAGAGGGCCTTCTCTACGTCCACTCATCCAGAGGTGGCCCCTT 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGTTGAAGATTCCTGTCTCTGGATCCAAATCAGAGGGCCTTCTCTACGTCCACTCATCCAGAGGTGGCCCCTT 518
Query 336 TCAGAGGTGGCACCTTGACGAGGTCTTTTTAGAGCTCAAGGATGGTCAGCAGATTCCTGTGTTCAAGCTCAGTG 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCAGAGGTGGCACCTTGACGAGGTCTTTTTAGAGCTCAAGGATGGTCAGCAGATTCCTGTGTTCAAGCTCAGTG 592
Query 410 GGGAAAACGGTGATGAAGTGAAAAAGGAG--------------------------------------------- 438
|||||||||||||||||||||||||||||
Sbjct 593 GGGAAAACGGTGATGAAGTGAAAAAGGAGTAGAGACGACCCAGAAGACCCAGCTTGCTTCTAGTCCATCCTTCC 666
Query 439 -------------------------------------------------------------------------- 438
Sbjct 667 CTCATCTCTACCATATGGCCACTGGGGTGGTGGCCCATCTCAGTGACAGACACTCCTGCAACCCAGTTTTCCAG 740
Query 439 -------------------------------------------------------------------------- 438
Sbjct 741 CCACCAGTGGGATGATGGCCTCCCTATTCCCTGAGACACAACAGTATTGAAATTGGGCCAATTAATAACCCCAC 814
Query 439 -------------------------------------------------------------------------- 438
Sbjct 815 AGTGGCCTCTCACTAAATGTGAGAGGTGAGGAAGCTGCAGGAGAAAATTTGAAGCTAGCAGTGTTCATGAGATG 888
Query 439 -------------------------------------------------------------------------- 438
Sbjct 889 TAAGTAAAGAAGCCATCTCCATAAAAGTACAACGTGACGCAGCAAGTGCTGATGGAGAAGCTGTAGAAGTTACA 962
Query 439 -------------------------------------------------------------------------- 438
Sbjct 963 CAGAAGATCTAGCTTGGACCATCGATGAAAGTGGCTACACTAAACAACAGATTTTAAATGTAGATAAAACAGCA 1036
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1037 TTTTATTGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCTTCAAAGGACAAGCT 1110
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1111 GACTCTTGTCAGGGGCTAGTGCAGCTGTGACTTTCAGTTAAAGCCAATGCTCATTGACTATTCTGAAAATCCCA 1184
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1185 GGGCCCTTAAGATATGCTGTATAAACGCAACAACAAAGCCTGGATGACGTTGGGTCTGTTTACAGCCTGGTCTA 1258
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1259 CTGAGTAAGCCCACTGTTGAGACCTAGTGCTCAGAAAAAATAGATTTCTTTCAAAATATGGCTGGGTGCAGTGG 1332
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1333 CTCACACCGGTAATCCCAGCACTTTGGGAGGCTGGGGCGGGTGGATTGCTTGATGCCAGGAGTTCAAGACCAGC 1406
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1407 CTGGGCAACATGGTGAAACCCTGTCTCAAAAAACAAATCCAAAAAACCAAAATATTGCTACTCATTAACAATGC 1480
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1481 ACCTGGTTACCCAAGAGCTCTGATGGAGATGTACAAGGAGATGAATACTGTTTTCATGCCTGCTAACACAGTAT 1554
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1555 CCATTCTGCTGCTGATAGATCAAGAAGTACTTTTGACTTTCAAAACTTGTTATTTAAGAAATACATTTTGTGGT 1628
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1629 TTCTCTGATGGTTCTGGGCAGTCAGTTCAAAACCTTCTGGAAAGGATTCACCATTCTAGATGCCATCAAGAGCA 1702
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1703 TTCAATTCACGGGAGGAGGTCAAAATATCAACATTAATTGGAATTTGGAAGAAATAGATTCCAATCCTCATGGA 1776
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1777 GGACTTGGAGGGTTTCAAGACTTCAGAGGAGGAAGGAACTGTAGATGGGCTGAAAATAGCAAGAGAACTAGAAG 1850
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1851 TGGAGGGGCCTAGAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGTTCCTTCTC 1924
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1925 ATGGACGAGCAAAGAAGGTGATTTCTTGAAATGGAATCTACTCCTGGTGAAGATGCTATGAACATTGTTGAAAT 1998
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1999 GACAAAAGATTTAGAATATTCCATAAACTTAGCTGTGGCCAGGGTTTGAGAGGATTGACTCCTAATTTTGAAGT 2072
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2073 TCTACTGTGGGTAAATGCTGTCAAACAGCATTGCATGCCACAGAGGAATCTCTCATGAAAGAGTTAATAAATGC 2146
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2147 AGCAAACTTCACTGTTGTCTTACTTTAAGAAACTGCCACAGTCACTGCAGGCTTCAGCAACTTATCTTTTCCTA 2220
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2221 CCCTCCTCTCGCATTTAAAAGTACTTTTAAATTAATGTATGTACATTATTTTTAGGCATAACACTGCTGCTCAT 2294
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2295 TTAAAAAAACTACAGTATGAACCATGTTATATGCAGTGGAAAGGCAAAAAATTCATGTGACTTACTTGCTTGTA 2368
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2369 TTTGGTTTATTGCAGTGGTCTGGAACTGAAAGTGATGCGTATTTCTGAGTTATGCCTGTATTTAAGAAGCTGAG 2442
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2443 TGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAACTAAAGACAGAAAAAAGCTTGAAAGCATCAAGA 2516
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2517 AAGAAGTGAAATCTTAGCTAGAGGGAAAAGTAACTCAGATGACAGTGGATTTCTCTCTGGAAACCATGGAGGCC 2590
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2591 AGAAGGAAGTGAGACAAGTTCTTTTAGTGCCAGAAGAACTATCAACTTGTGGCTGGGCACGGTGGCTCACACCT 2664
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2665 GTAATCCCAGCACTTTGGGAGACCAAGGTGGGCAGATCACTTGAAGTCAGGAGTTTGAGACCAGCCTGGCCAAC 2738
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2739 ATGGCAAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCAGGCATGGTGGCACATGCCTGTAATCTCAGCTA 2812
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2813 CTTGGGAGGCTGAGGCACGAGAATTACTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCAAGATCCTGCCACTG 2886
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2887 CACTCCAGCCTGGGCAACAGAGCAAGACTGCCTCAAAACAAAACTCTGTCAACTCCAAATTCCTATTTGGTGAA 2960
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2961 ATGATCCTTCAGGATTGATGGGGTAATAAAAACATTCTCGGTTGATAGAAAACTAAAAGAATTTGTTGAATGAG 3034
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3035 TCTACCCTATAGACCTTGAAAAGACCAACCCTAAAGGAAGTTCTTGAACCAGAAAGGAAACATTTAAAAAAAAA 3108
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3109 AAGTTTTGGGATGTCAGGAATAACGATGGAAACAGCAAAAATATGGACTGTCTGCATTGTCCTAGAGTATATGA 3182
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3183 AGTAACTACAATTAACTCTTCGGTTACAATGGATTCCTTGGTTTCTGATTTGTCGGTATCCGAATTAATTTCAG 3256
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3257 GCACAGAATGACCTTCTTGGAGGGCATTTGCTTCTTCTAGTGCCTTTTCCATCCTGAAAGAAGGCTCTTGAATA 3330
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3331 CTGCTCTGTGTCAACCAGGGGTGCTTTAGACATTCTTCAGCAGTGGCTCGATCTCTGTAAAGATACATGTTTTA 3404
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3405 CAGTTAAGACATGTTAGAACTTCAATTAAAATTAGAGCATAAGAAACACAACTGGTTTTGAGAATCCATCCCTT 3478
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3479 CTTCACTCAGTCCACGTAAAGGTTAGGATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGAC 3552
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3553 ACTGATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTCCAAATTGATCTACGC 3626
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3627 TGGTGTAATCAGAGTGAATCTCAGAACTTTGGACAGAGCTGTGAGCAGAGACTGACTTTCCTGCTGTCTCCAGG 3700
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3701 TAGCTGCAAGGCTGAACAGCAGCACCTACTTTATTACCATCTTACTGTCATTCAAAGAAGGCAGAGCTGAATGC 3774
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3775 TGGAGAAAAACTGAGTACTAGCAACAGTTTTTGAACCCTGAATACTGTCATAACTGAAGCTAGAATTATCCCTG 3848
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3849 GACTTGTTTGCCACTAAAATTTCCTTGTTTTGCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGAA 3922
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3923 CATAACTGATATACTGTCCTTTGTTTTTCTTTCCTTCCTCTTCTCCGCCTTTGATGATTTTAAATTAGAAATCT 3996
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3997 ACCTGCCTCTAATCTCTTTAATTTTCTCATTTATTTACTGCTGCCTATTTTCCAAAACACTGCTTCTCGAATAT 4070
Query 439 -------------------------------------------------------------------------- 438
Sbjct 4071 TCCTGGCTCAAAAATCATCTATGTCTTCATGACATATGAAACCCCTAGAATCCAGCCTTTCCCCAGCTTTTAAT 4144
Query 439 -------------------------------------------------------------------------- 438
Sbjct 4145 ATCTCCTAATTGATTTCTCAATTCCAGTGAAATGATTCCATTTATTTTTTTCCCAAACACATCACAAATATTCC 4218
Query 439 -------------------------------------------------------------------------- 438
Sbjct 4219 TAACTCTTGTGAGCAATTTTCTCTCATTCTTCTCAACTTATCTAAATCCTAACTTTTCAAAAGATCTAGCTCAA 4292
Query 439 -------------------------------------------------------------------------- 438
Sbjct 4293 GTTCTGTCTTATCATATTTTGAGTTCCTTTCTTTGGCATTGTATTATTTTGTATCTTTCCATGTACACATGTGT 4366
Query 439 -------------------------------------------------------------------------- 438
Sbjct 4367 GCATTATCTCCCTGATAAAACTAACTGGCTAGAGGATAGGAGTAAAGACTCAATTCTAATATCCTTGTTACCTA 4440
Query 439 ---------------------------------------------- 438
Sbjct 4441 ATAATACACAAACGTGAAACATGTTTGAATAAATCACTGTTAAATA 4486
