Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03795
- Subject:
- NR_158987.2
- Aligned Length:
- 3727
- Identities:
- 1371
- Gaps:
- 2356
Alignment
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 1 GCTAATTCCCCGCTACCGGGTTGCGGCCGGAAGCCGGGCGCCGCGGCTCTGCTTCCCTCGGGGATCTGGCGACA 74
Query 2 TGGCCAGAAAGGCTCTCAAGCTTGCTTCGTGGACCAGCATGGCTCTTGCTGCCTCTGGCATCTACTTCTACAGT 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGGCCAGAAAGGCTCTCAAGCTTGCTTCGTGGACCAGCATGGCTCTTGCTGCCTCTGGCATCTACTTCTACAGT 148
Query 76 AACAAGTACTTGGACCCTAATGACTTTGGCGCTGTCAGGGTGGGCAGAGCAGTTGCTACGACGGCTGTCATCAG 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AACAAGTACTTGGACCCTAATGACTTTGGCGCTGTCAGGGTGGGCAGAGCAGTTGCTACGACGGCTGTCATCAG 222
Query 150 TTACGACTACCTCACTTCCCTGAAGAGTGTCCCTTATGGCTCAGAGGAGTACTTGCAGCTGAGATCTAAGGTGC 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTACGACTACCTCACTTCCCTGAAGAGTGTCCCTTATGGCTCAGAGGAGTACTTGCAGCTGAGATCTAAGGTGC 296
Query 224 ACCTTCGCTCTGCCAGGCGTCTCTGTGAGCTCTGCTGTGCCAACCGGGGCACCTTCATCAAGGTGGGCCAGCAC 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACCTTCGCTCTGCCAGGCGTCTCTGTGAGCTCTGCTGTGCCAACCGGGGCACCTTCATCAAGGTGGGCCAGCAC 370
Query 298 CTGGGGGCTCTGGACTACCTGTTGCCAGAGGAGTACACCAGCACGCTGAAGGTACTGCACAGCCAGGCTCCACA 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTGGGGGCTCTGGACTACCTGTTGCCAGAGGAGTACACCAGCACGCTGAAGGTACTGCACAGCCAGGCTCCACA 444
Query 372 GAGCAGCATGCAAGAGATCCGCCAGGTCATCCGAGAAGATCTGGGCAAGGAGATCCATGATTTGTTCCAGAGCT 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGCAGCATGCAAGAGATCCGCCAGGTCATCCGAGAAGATCTGGGCAAGGAGATCCATGATTTGTTCCAGAGCT 518
Query 446 TCGATGACACCCCTCTGGGGACGGCCTCCCTGGCCCAGGTCCACAAGGCAGTGCTGCATGATGGGCGGACGGTG 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCGATGACACCCCTCTGGGGACGGCCTCCCTGGCCCAGGTCCACAAGGCAGTGCTGCATGATGGGCGGACGGTG 592
Query 520 GCCGTGAAGGTCCAGCACCCAAAGGTGCGGGCTCAGAGCTCGAAGGACATTCTCCTGATGGAGGTGCTCGTTCT 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCCGTGAAGGTCCAGCACCCAAAGGTGCGGGCTCAGAGCTCGAAGGACATTCTCCTGATGGAGGTGCTCGTTCT 666
Query 594 GGCTGTGAAGCAGCTGTTCCCAGAGTTTGAGTTTATGTGGCTTGTGGATGAAGCCAAGAAGAACCTGCCTTTGG 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGCTGTGAAGCAGCTGTTCCCAGAGTTTGAGTTTATGTGGCTTGTGGATGAAGCCAAGAAGAACCTGCCTTTGG 740
Query 668 AGCTGGATTTCCTCAATGAAGGGAGGAATGCTGAGAAGGTGTCCCAGATGCTCAGGCATTTTGACTTCTTGAAG 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGCTGGATTTCCTCAATGAAGGGAGGAATGCTGAGAAGGTGTCCCAGATGCTCAGGCATTTTGACTTCTTGAAG 814
Query 742 GTCCCCCGAATCCACTGGGACCTGTCCACGGAGCGGGTCCTCCTGATGGAGTTTGTGGATGGCGGGCAGGTCAA 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTCCCCCGAATCCACTGGGACCTGTCCACGGAGCGGGTCCTCCTGATGGAGTTTGTGGATGGCGGGCAGGTCAA 888
Query 816 TGACAGAGACTACATGGAGAGGAACAAGATCGACGTCAAT---------------------------------- 855
||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGACAGAGACTACATGGAGAGGAACAAGATCGACGTCAATGAGGTGAGGTCAAGAGCTCAGGGCTGCTGTGCCG 962
Query 856 -------------------------------------------------------------------------- 855
Sbjct 963 GGGAACGTGGGCTTGGTCAAGGCTGCCCAGGAAGTGCCTGTGTGTCCAGGTGAGGCCTCAGAGTCTGGCCCCCT 1036
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1037 TGTCTTTAATAGGGCCCATTGTCTGGAGAATTATAAACTTTGAGCAAGAAAGATTCTTTCAGGTCATTTAGGCC 1110
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1111 AGCCCTGTGCACACAGCGGCCTGCAGGGACATGCTGAACCCCTTCTGCCATTACCTGCTTTTCCTTTGTACCAT 1184
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1185 CTGAGCCCCACAAAGCTAAGCGGCCACAGAGAACAATGATGCAAAATCAGTGGGACTTAATCCTTTTGGCTCTG 1258
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1259 TGGGGCCTGTCTGTTGTCTCTTCCCTCTTCCTGCCCTTCTCTCTCCTTCCCACTTCCCAGATCTCAAGGGATCA 1332
Query 856 -------------------------------------------------------GAGATCTCACGCCACCTGG 874
|||||||||||||||||||
Sbjct 1333 GGCAAAAAGGGGACAGCAGCAACCAACTGCATCAGCCTCCTAGAGCAGGAAAAAAGAGATCTCACGCCACCTGG 1406
Query 875 GCAAGATGTATAGTGAGATGATCTTCGTCAATGGCTTCGTGCACTGCGATCCCCACCCCGGCAATGTACTGGTG 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCAAGATGTATAGTGAGATGATCTTCGTCAATGGCTTCGTGCACTGCGATCCCCACCCCGGCAATGTACTGGTG 1480
Query 949 CGGAAGCACCCCGGCACGGGAAAGGCGGAGATTGTCCTGTTGGACCATGGGCTTTACCAGATGCTCACGGAAGA 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CGGAAGCACCCCGGCACGGGAAAGGCGGAGATTGTCCTGTTGGACCATGGGCTTTACC---------------- 1538
Query 1023 ATTCCGCCTGAATTACTGCCACCTCTGGCAGTCTCTGATCTGGACTGACATGAAGAGAGTGAAGGAGTACAGCC 1096
Sbjct 1539 -------------------------------------------------------------------------- 1538
Query 1097 AGCGACTGGGAGCCGGGGATCTCTACCCCTTGTTTGCCTGCATGCTGACGGCGCGATCGTGGGACTCGGTCAAC 1170
Sbjct 1539 -------------------------------------------------------------------------- 1538
Query 1171 AGAGGCATCAGCCAAGCTCCCGTCACTGCCACTGAGGACTTAGAGATTCGCAACAACGCGGCCAACTACCTCCC 1244
||||||||||||||||||||||||||||||||||||||||
Sbjct 1539 ----------------------------------AGGACTTAGAGATTCGCAACAACGCGGCCAACTACCTCCC 1578
Query 1245 CCAGATCAGCCATCTCCTCAACCACGTGCCGCGCCAGATGCTGCTCATCTTGAAGACCAACGACCTGCTGCGTG 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1579 CCAGATCAGCCATCTCCTCAACCACGTGCCGCGCCAGATGCTGCTCATCTTGAAGACCAACGACCTGCTGCGTG 1652
Query 1319 GCATTGAGGCCGCCCTGGGCACCCGCGCCAGCGCCAGCTCCTTTCTCAACATGTCACGTTGCTGCATCAGAGCG 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1653 GCATTGAGGCCGCCCTGGGCACCCGCGCCAGCGCCAGCTCCTTTCTCAACATGTCACGTTGCTGCATCAGAGCG 1726
Query 1393 CTAGCTGAGCACAAGAAGAAGAATACCTGTTCATTCTTCAGAAGGACCCAGATCTCTTTCAGCGAGGCCTTCAA 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1727 CTAGCTGAGCACAAGAAGAAGAATACCTGTTCATTCTTCAGAAGGACCCAGATCTCTTTCAGCGAGGCCTTCAA 1800
Query 1467 CTTATGGCAGATCAACCTCCATGAGCTCATCCTGCGTGTGAAGGGGTTGAAGCTGGCTGACCGGGTCTTGGCCC 1540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1801 CTTATGGCAGATCAACCTCCATGAGCTCATCCTGCGTGTGAAGGGGTTGAAGCTGGCTGACCGGGTCTTGGCCC 1874
Query 1541 TAATATGCTGGCTGTTCCCTGCTCCACTC--------------------------------------------- 1569
|||||||||||||||||||||||||||||
Sbjct 1875 TAATATGCTGGCTGTTCCCTGCTCCACTCTGAGTGGAATTGCTCTCCCTGCCCCATTCTGGTGTCTTTCCACTC 1948
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 1949 CTCAGCCCCTCATCTTGCCTCCACCCAGCTGCTCCATTTTTGCCACATCGTGGCCCGCAGCCCCAGAGTCACTG 2022
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2023 TCCATGTCACCATCCTTCTCCTCCTTTGGAATCCTCTCCGCACACTGTGGCCCTTGTCTCAGGGCCCACAAGCT 2096
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2097 GAACTGTGGCATAGCTCTCTCTTCTTCTCCAAGAAGACTCAGCAGCCTACATTCCCATTCCTGGTATGTGCCAT 2170
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2171 TGGGTTGGATGTCCCCACTACTTCCGTTAACCCTTCCCATTGTCAAGATGTGCCACGGGTGCCACTGGGGGCAC 2244
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2245 ACTGAACTTGTAGGGAGTGTGATTTTGTTGGAGGTGCACATGGTCTCTGAATTTGACAGAGAACACCTTCCCTT 2318
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2319 TCCTTGCCATGTCACCCTCCAGAGGAAGTCACACCTCAGCGAGGTGGTTTGGCATCTGGGGCCAACTCCATTAC 2392
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2393 AGCTATGAGCTCACTGCTGTCAGTGACGTTTGGTGTTTTCTGTACTGTGTTTCAATAAAAACTCCTTCAAGGTT 2466
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2467 GCAGGATTTGTCCATCATAACTCACTGGCCTCCCACCTGACCCCAGGCACGTGCCCTTCCAGAATGTGCTCATG 2540
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2541 GTCCTCGCCAAGGGCTTATGGTTCCTCTTGGTTGCTGCTTCCTCAGGGTTTCCCAGGGAGATCTAGGGAACAGA 2614
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2615 AGGCCAGGGGCTGTTTGGTGGGATTTTCCTTATAGGTTGGGAGTTCACCTACAATGCCCATTAGGTCAGAGTGG 2688
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2689 ACCTGAATCGAGTATTGGTGTGATCTTCTGCTTGGCTTCTTGCTCCTGTAATCCTTCCAACCTGTGGGGCCACT 2762
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2763 TCCACTATGGGGCCACTTCCTGCTTCTTGGGGGTTTCTCTTACCTTCCAAGACTCAGACTCTGGTTGGAGGAGT 2836
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2837 TAAGAAGCCCAAGGCCAGGAACTCAGAGGCTCAGCTGAAACCTTGGACCTTGTTTTTCTGTGACCTGGGTACCA 2910
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2911 ACCTTGTTCTACTGTTTCCTGACTTATCCCTTTGGTTCTCATTCAGTGGCCCCAGTTTTAGGCCTGGAATTCTA 2984
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2985 CTTGTCTCCCCCCAGTCCTTCTGGAGACCTTAGTCCTCTTGCTGAAACCTCCGTCACTGTGGCTGGGTTTTCAC 3058
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3059 TGGGAAACTTCTGTGTTTCTACCCCATTGCTTGCTGCCAGCACTGCCTCTCCCCCCAGCCTGGTTGTCTGCTTC 3132
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3133 TGTTTCTTGGACATCCCTAAGCTCCTGCTCTAATTCCCATGTCTTTGTCTTTGGCAGGTCCTACTGTCTGCTTT 3206
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3207 CACGGACAGTAATTGTATTTGAGCCTCTCTGATCTTACTTCACCCAATTCACAAGGGCAGAAAAAATCCTGAAT 3280
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3281 TTGAGCCTAATTTTCTGTACTCTTTATTCATAGTACAGCAAGCAGATTTTTCAGTGATCAGTGACAATTCACAA 3354
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3355 TCCTTTTATTTCCCAAAAGAATTAATTGTTCTTAGTGACCAGTTGGATGCACCCAGGGACCTGAGAGTATAATT 3428
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3429 TGCAATATCTGATTATTAATCTTGAGGATGTGTGCTGCATAGTATATTTTATGGTGTCTTTTATAGCCACTGAA 3502
Query 1570 --------------------------- 1569
Sbjct 3503 GTAAATATAAATGTCCTTTCTGTTCAA 3529
