Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03863
- Subject:
- XR_937537.3
- Aligned Length:
- 4194
- Identities:
- 894
- Gaps:
- 3300
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGAGTTGGGGCAAAACAGGAGGCGTTTCCCTACCCGCATACATCCCCGTCCCCGAGACACCCAATCCCCCCAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCCAGCCTGCCCGCGCCTCCCGCCCCCAGCTCCTCGCCCTGGGGACAGCTGGCAGCCCCGCGCGGACCAGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAAAGCCGATCAATCCCGGAGGCGTGGGGGCGGAGGGACGACCCGCCGGGGCTTTCCCGGGCGCTGCTCTCCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGCTGCCCCCTCGCTAGGACCCGGCGGACGCCTCGTCTGGTTTTCACGCCCTCTAGCCCCTACCCCCACACCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCAAAACAGAACAGACCCCCATCCCTGGGCTGGAGGACCCGCCTCTTGGCAGCCAGCTGAGAAGGCGCCCCGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGGGGGAAACTGACATCCCATCTAGAGCCGTCCCTCCTCTTCCTCCCCTCCCGACTCTCTGCTCCTTTCCCGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCAGAAGTTCAAGGGCCCCCGGCCTCCTGCGCTCCTGCCGCCGGGACCCTCGACCTCCTCAGAGCAGCCGGCT 518
Query 1 --------------ATGGCGAGGAGGAGCCGCCACCGCCTCCTCCTGCTGCTGCTGCGCTACCTGGTGGTCGCC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCCGCCCCGGGAAGATGGCGAGGAGGAGCCGCCACCGCCTCCTCCTGCTGCTGCTGCGCTACCTGGTGGTCGCC 592
Query 61 CTGGGCTATCATAAGGCCTATGGGTTTTCTGCCCCAAAAGACCAACAAGTAGTCACAGCAGTAGAGTACCAAGA 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGGGCTATCATAAGGCCTATGGGTTTTCTGCCCCAAAAGACCAACAAGTAGTCACAGCAGTAGAGTACCAAGA 666
Query 135 GGCTATTTTAGCCTGCAAAACCCCAAAGAAGACTGTTTCCTCCAGATTAGAGTGGAAGAAACTGGGTCGGAGTG 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGCTATTTTAGCCTGCAAAACCCCAAAGAAGACTGTTTCCTCCAGATTAGAGTGGAAGAAACTGGGTCGGAGTG 740
Query 209 TCTCCTTTGTCTACTATCAACAGACTCTTCAAGGTGATTTTAAAAATCGAGCTGAGATGATAGATTTCAATATC 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCTCCTTTGTCTACTATCAACAGACTCTTCAAGGTGATTTTAAAAATCGAGCTGAGATGATAGATTTCAATATC 814
Query 283 CGGATCAAAAATGTGACAAGAAGTGATGCGGGGAAATATCGTTGTGAAGTTAGTGCCCCATCTGAGCAAGGCCA 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CGGATCAAAAATGTGACAAGAAGTGATGCGGGGAAATATCGTTGTGAAGTTAGTGCCCCATCTGAGCAAGGCCA 888
Query 357 AAACCTGGAAGAGGATACAGTCACTCTGGAAGTATTAGTGGCTCCAGCAGTTCCATCATGTGAAGTACCCTCTT 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAACCTGGAAGAGGATACAGTCACTCTGGAAGTATTAGTGGCTCCAGCAGTTCCATCATGTGAAGTACCCTCTT 962
Query 431 CTGCTCTGAGTGGAACTGTGGTAGAGCTACGATGTCAAGACAAAGAAGGGAATCCAGCTCCTGAATACACATGG 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTGCTCTGAGTGGAACTGTGGTAGAGCTACGATGTCAAGACAAAGAAGGGAATCCAGCTCCTGAATACACATGG 1036
Query 505 TTTAAGGATGGCATCCGTTTGCTAGAAAATCCCAGACTTGGCTCCCAAAGCACCAACAGCTCATACACAATGAA 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTTAAGGATGGCATCCGTTTGCTAGAAAATCCCAGACTTGGCTCCCAAAGCACCAACAGCTCATACACAATGAA 1110
Query 579 TACAAAAACTGGAACTCTGCAATTTAATACTGTTTCCAAACTGGACACTGGAGAATATTCCTGTGAAGCCCGCA 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TACAAAAACTGGAACTCTGCAATTTAATACTGTTTCCAAACTGGACACTGGAGAATATTCCTGTGAAGCCCGCA 1184
Query 653 ATTCTGTTGGATATCGCAGGTGTCCTGGGAAACGAATGCAAGTAGATGATCTCAACATAAGTGGCATCATAGCA 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ATTCTGTTGGATATCGCAGGTGTCCTGGGAAACGAATGCAAGTAGATGATCTCAACATAAGTGGCATCATAGCA 1258
Query 727 GCCGTAGTAGTTGTGGCCTTAGTGATTTCCGTTTGTGGCCTTGGTGTATGCTATGCTCAGAGGAAAGGCTACTT 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCCGTAGTAGTTGTGGCCTTAGTGATTTCCGTTTGTGGCCTTGGTGTATGCTATGCTCAGAGGAAAGGCTACTT 1332
Query 801 TTCAAAAGAAACCTCCTTCCA----------------------------------------------------- 821
|||||||||||||||||||||
Sbjct 1333 TTCAAAAGAAACCTCCTTCCAATCTGGCAGACCTAACTTTGGCTCTATGGGCGTAGAGAGAAGATGGATGACAA 1406
Query 822 -------------------------------------------------------------------------- 821
Sbjct 1407 ACTATCTGAGGCTATGGCAGCTGGGAGTGGAGAAGATATACTGAAGCCATGGCTTCAGACAGTTTGTCATCTCC 1480
Query 822 -------------------------------------------------------------------------- 821
Sbjct 1481 TAATTCCTTTGAAGAATCATCTGCCATTGACTTCCTGTTCCCAGATTTCTGGCTCAATCCTGGTCTCTCAGTCT 1554
Query 822 -GAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTTCAAGCACACAAAATCCTTTATAATT 894
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTTCAAGCACACAAAATCCTTTATAATT 1628
Query 895 -------------------------------------------------------------------------- 894
Sbjct 1629 TAAAGACTCCACTTTAGAGATACACCAAAGCCACCGTTGTTACACAAGTTATTAAACTATTATAAAACTCTGCT 1702
Query 895 -------------------------------------------------------------------------- 894
Sbjct 1703 TTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATTTCATTTTAATTTTCATGACTACTAACT 1776
Query 895 -------------------------------------------------------------------------- 894
Sbjct 1777 CACCTGAACTTGCTATTTTAAACAAATAGTTCTGTCGACACCTAAAATATAATCTGGCTTCTTGTGTCTGGACT 1850
Query 895 -------------------------------------------------------------------------- 894
Sbjct 1851 AAGTTAAAAGAATTAAAATACTTTGTAATGTCCTGGGCTTTGGGAAATGTTAACCACGTCCTAACTTCTAGAGA 1924
Query 895 -------------------------------------------------------------------------- 894
Sbjct 1925 ACGTTACTAAAATATAACATACTGATTGTGAAGTCAATCCACAGGTCATGAAAATATAAATCAGACTCTGCACG 1998
Query 895 -------------------------------------------------------------------------- 894
Sbjct 1999 AGAGTCTGATTTAGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTCTGCCAGAA 2072
Query 895 -------------------------------------------------------------------------- 894
Sbjct 2073 TCCTCTTTTCTCCCCTAATATCATCCTTATTCTGATGCTCGTTCATCACTAACACACCCACAGAAAGGAGGAAG 2146
Query 895 -------------------------------------------------------------------------- 894
Sbjct 2147 CGGGATGGGTCTTATGCCCAAGGATTTGCACTTTGTGTTTACTTCCATTCCTGGGAACTAAAAGCAACATCAAA 2220
Query 895 -------------------------------------------------------------------------- 894
Sbjct 2221 AGAAATGCCTAATGGCTGGAGCCCACAGGTGTGCACCACAGGATTTGCCTGGTGTGTGTCACTGATTTCTTCAT 2294
Query 895 -------------------------------------------------------------------------- 894
Sbjct 2295 TAAACGTAATTTAGATGGTCAAACACAAACCCAAGTGGCTTATTTCACCCCTACTGCTGCTTGCCACTGCTTCC 2368
Query 895 -------------------------------------------------------------------------- 894
Sbjct 2369 TTCTTGTAAGATTTCTTTGAAGAGGATCAGTGACTTTGACATCAGAACTCACCACTGGAGCCTACACAAGTTTG 2442
Query 895 -------------------------------------------------------------------------- 894
Sbjct 2443 CAGATACCTTTCCCTGCAGGAGTGGTGACTTCACATCTTTCTGTCTCTAAAAATTGTGCAGTGACATTCCGGGC 2516
Query 895 -------------------------------------------------------------------------- 894
Sbjct 2517 CAAGTCCCTTAGTCAGGGGTTGACAATTCTGCTTTTGGACAAGGAGGGATGTGGAGGGAAGAAGTAATAGTCTA 2590
Query 895 -------------------------------------------------------------------------- 894
Sbjct 2591 CCAGGAAAATGAGACGAAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGCACAT 2664
Query 895 -------------------------------------------------------------------------- 894
Sbjct 2665 GAGCAATGGCTCAAACGAAAAGTGGATCTAATGTGGGTTTCTCAACCGATGAACCACAAAAGCTTCCAGCTACT 2738
Query 895 -------------------------------------------------------------------------- 894
Sbjct 2739 ATTACAATGTGAAAATTCCAATGATCCGTTTACCAGAGCAATTAGACTATGTTAAAAATTCATATCATTTGTAA 2812
Query 895 -------------------------------------------------------------------------- 894
Sbjct 2813 CTTCTTTTAATTACTGAATTGATATTAAAAACAAAATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTG 2886
Query 895 -------------------------------------------------------------------------- 894
Sbjct 2887 GATGAAAAGGTCACTTGCTACCTTTGACAACTATGAACATGATGGTTAATCTTCTTTCTTTTTTTTTTTTTTTT 2960
Query 895 -------------------------------------------------------------------------- 894
Sbjct 2961 TTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTACAGTGGCACAATCTTGGCTCACTGCAACCTCCGCC 3034
Query 895 -------------------------------------------------------------------------- 894
Sbjct 3035 TCCCCTCCGCCTCCCAGATTCAAGCACTTCTCCTGCCTCAGCCTCCCAAGTAGCTGAGATTATAGGCGTGTACC 3108
Query 895 -------------------------------------------------------------------------- 894
Sbjct 3109 ACCACACCTGGCTAATTTTTGTATTTTAGTAGAGAAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACCTCT 3182
Query 895 -------------------------------------------------------------------------- 894
Sbjct 3183 GACCTCAAATGATCCACCCCCATCAGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGCACTGGGCAGG 3256
Query 895 -------------------------------------------------------------------------- 894
Sbjct 3257 TTAATCTTCTTTCAAAAGAGTCTGCTCTTTCTACCCAATTGGCGAAGCAAATCCCCAGGATTCACCGAACAAAT 3330
Query 895 -------------------------------------------------------------------------- 894
Sbjct 3331 GGATTAAGCACCCACTGAGTGCCTAGCATGTGCCTGGACACCAGGCCACCGGGAAGATGCTCCCCCTTTGACTT 3404
Query 895 -------------------------------------------------------------------------- 894
Sbjct 3405 GTCTATGACATGCTATGTCTCTCACCAGATCCCTTCCTGGAGGTCGGGCTTCTGTAACATGGCTCTGCCCCCAA 3478
Query 895 -------------------------------------------------------------------------- 894
Sbjct 3479 AATAAAATTTTCACCACGAGTCAGGGATCGGCAAACATTTTCTGTAAAGAGCCAGAAAGTAGATATTTTAAGTC 3552
Query 895 -------------------------------------------------------------------------- 894
Sbjct 3553 ATAAGGTCCCTGTTAACAACTACTTGACTCTGCCATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTA 3626
Query 895 -------------------------------------------------------------------------- 894
Sbjct 3627 GTCATGTCTGTGTTCCAATAAGACTTTATTTACAAAAACAGCAGGCACAGACAAGATTTGGCCCACAGGCATAG 3700
Query 895 -------------------------------------------------------------------------- 894
Sbjct 3701 ATTCCCAACTCATGGTGGTGAAGTACAGAAAAAAACACCTGTCTACAAGCTTTTGTAAGAAATCAGGCTAAATG 3774
Query 895 -------------------------------------------------------------------------- 894
Sbjct 3775 TTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCTCTTGCATTGGCATGCCAAGAGGAT 3848
Query 895 -------------------------------------------------------------------------- 894
Sbjct 3849 AGATGACTCTGAAAGACGCCTCTTCAGACATACCTGTCATCACACAAGATCAACTTCTTCAGTTTAAATGACAC 3922
Query 895 -------------------------------------------------------------------------- 894
Sbjct 3923 AAATCCATATTGTGGAAGGAAAATATGTAGTGCCTTAGCTTCACTAATAGTTGTAAAACTTCTTTTTAAGACAT 3996
Query 895 -------------------------------------------------------------------------- 894
Sbjct 3997 CAAAGGCTAGAGGATTCATTTTATGCAGTGCGAACATCTAATAACACTCTCTGTGTCAAATATATATTGTACAT 4070
Query 895 -------------------------------------------------------------------------- 894
Sbjct 4071 TACCTTAAACTATTGTAATAGCTAGGTAAAAATCCTTGTATAAAAGAATGTTTTCCCCCACACAAAGGGCAGAG 4144
Query 895 -------------------------------------------------- 894
Sbjct 4145 TATTGAGCACTAATTTCCTATTAAAAGTATATATATGTATCTGTGGGTCA 4194
