Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03868
- Subject:
- XM_024449680.1
- Aligned Length:
- 2529
- Identities:
- 1914
- Gaps:
- 615
Alignment
Query 1 ATGTCTTTTCCACCTCATTTGAATCGCCCTCCCATGGGAATCCCAGCACTCCCACCAGGGATCCCACCCCCGCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTTTCCAGGATTTCCTCCACCTGTACCTCCAGGGACCCCAATGATTCCTGTACCAATGAGCATTATGGCTCCTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CTCCAACTGTCTTAGTACCCACTGTGTCTATGGTTGGAAAGCATTTGGGCGCAAGAAAGGATCATCCAGGCTTA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AAGGCTAAAGAAAATGATGAAAATTGTGGTCCTACTACCACTGTTTTTGTTGGCAACATTTCCGAGAAAGCTTC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGACATGCTTATAAGACAACTCTTAGCTAAATGTGGTTTGGTTTTGAGCTGGAAGAGAGTACAAGGTGCTTCCG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GAAAGCTTCAAGCCTTCGGATTCTGTGAGTACAAGGAGCCAGAATCTACCCTCCGTGCACTCAGATTATTACAT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GACCTGCAAATTGGAGAGAAAAAGCTACTCGTTAAAGTTGATGCAAAGACAAAGGCACAGCTGGATGAATGGAA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AGCAAAGAAGAAAGCTTCTAATGGGAATGCAAGGCCAGAAACTGTCACTAATGACGATGAAGAAGCCTTGGATG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AAGAAACAAAGAGGAGAGATCAGATGATTAAAGGGGCTATTGAAGTTTTAATTCGTGAATACTCCAGTGAGCTA 666
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 -----------------------ATGATTAAAGGGGCTATTGAAGTTTTAATTCGTGAATACTCCAGTGAGCTA 51
Query 667 AATGCCCCCTCACAGGAATCTGATTCTCACCCCAGGAAGAAGAAGAAGGAAAAGAAGGAGGACATTTTCCGCAG 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 52 AATGCCCCCTCACAGGAATCTGATTCTCACCCCAGGAAGAAGAAGAAGGAAAAGAAGGAGGACATTTTCCGCAG 125
Query 741 ATTTCCAGTGGCCCCACTGATCCCTTATCCACTCATCACTAAGGAGGATATAAATGCTATAGAAATGGAAGAAG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 126 ATTTCCAGTGGCCCCACTGATCCCTTATCCACTCATCACTAAGGAGGATATAAATGCTATAGAAATGGAAGAAG 199
Query 815 ACAAAAGAGACCTGATATCTCGAGAGATCAGCAAATTCAGAGACACACATAAGAAACTGGAAGAAGAGAAAGGC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 200 ACAAAAGAGACCTGATATCTCGAGAGATCAGCAAATTCAGAGACACACATAAGAAACTGGAAGAAGAGAAAGGC 273
Query 889 AAAAAGGAAAAAGAAAGACAGGAAATTGAGAAAGAACGGAGAGAAAGAGAGAGGGAGCGTGAAAGGGAACGAGA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 274 AAAAAGGAAAAAGAAAGACAGGAAATTGAGAAAGAACGGAGAGAAAGAGAGAGGGAGCGTGAAAGGGAACGAGA 347
Query 963 AAGGCGAGAACGGGAACGAGAAAGGGAAAGAGAACGTGAACGAGAAAAGGAGAAAGAACGGGAGCGGGAACGAG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 348 AAGGCGAGAACGGGAACGAGAAAGGGAAAGAGAACGTGAACGAGAAAAGGAGAAAGAACGGGAGCGGGAACGAG 421
Query 1037 AACGGGATAGGGACCGTGACCGGACAAAAGAGAGAGACCGAGATCGGGATCGAGAGAGAGATCGTGACCGGGAT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 AACGGGATAGGGACCGTGACCGGACAAAAGAGAGAGACCGAGATCGGGATCGAGAGAGAGATCGTGACCGGGAT 495
Query 1111 AGAGAAAGGAGCTCAGATCGTAATAAGGATCGCAGTCGATCAAGAGAAAAAAGCAGAGATCGTGAAAGGGAACG 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 AGAGAAAGGAGCTCAGATCGTAATAAGGATCGCAGTCGATCAAGAGAAAAAAGCAGAGATCGTGAAAGGGAACG 569
Query 1185 AGAGCGGGAAAGAGAGAGAGAGAGAGAACGAGAGCGAGAACGAGAACGGGAGCGAGAGAGAGAGCGAGAGAGGG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 570 AGAGCGGGAAAGAGAGAGAGAGAGAGAACGAGAGCGAGAACGAGAACGGGAGCGAGAGAGAGAGCGAGAGAGGG 643
Query 1259 AACGGGAGCGAGAAAGAGAAAAAGACAAAAAACGGGACCGAGAAGAAGATGAAGAAGATGCATACGAACGAAGA 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 644 AACGGGAGCGAGAAAGAGAAAAAGACAAAAAACGGGACCGAGAAGAAGATGAAGAAGATGCATACGAACGAAGA 717
Query 1333 AAACTTGAAAGAAAACTCCGAGAGAAAGAAGCTGCTTATCAAGAGCGCCTTAAGAATTGGGAAATCAGAGAACG 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 AAACTTGAAAGAAAACTCCGAGAGAAAGAAGCTGCTTATCAAGAGCGCCTTAAGAATTGGGAAATCAGAGAACG 791
Query 1407 AAAGAAAACCCGGGAATATGAGAAAGAAGCTGAAAGAGAAGAAGAAAGAAGAAGAGAAATGGCCAAAGAAGCTA 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 792 AAAGAAAACCCGGGAATATGAGAAAGAAGCTGAAAGAGAAGAAGAAAGAAGAAGAGAAATGGCCAAAGAAGCTA 865
Query 1481 AACGACTAAAAGAATTCTTAGAAGACTATGATGATGATAGAGATGACCCCAAATATTACAGAGGAAGTGCTCTT 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 866 AACGACTAAAAGAATTCTTAGAAGACTATGATGATGATAGAGATGACCCCAAATATTACAGAGGAAGTGCTCTT 939
Query 1555 CAGAAAAGGTTGCGTGATAGAGAAAAGGAAATGGAAGCAGATGAACGAGATAGGAAGAGAGAGAAGGAGGAGCT 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 940 CAGAAAAGGTTGCGTGATAGAGAAAAGGAAATGGAAGCAGATGAACGAGATAGGAAGAGAGAGAAGGAGGAGCT 1013
Query 1629 TGAGGAAATCAGGCAGCGCCTTCTGGCAGAAGGGCATCCAGATCCAGATGCAGAGCTCCAGAGGATGGAACAAG 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1014 TGAGGAAATCAGGCAGCGCCTTCTGGCAGAAGGGCATCCAGATCCAGATGCAGAGCTCCAGAGGATGGAACAAG 1087
Query 1703 AGGCTGAGAGGCGCAGGCAGCCACAAATAAAGCAAGAGCCAGAATCAGAAGAGGAGGAAGAAGAAAAGCAAGAA 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1088 AGGCTGAGAGGCGCAGGCAGCCACAAATAAAGCAAGAGCCAGAATCAGAAGAGGAGGAAGAAGAAAAGCAAGAA 1161
Query 1777 AAAGAAGAAAAACGAGAAGAACCCATGGAAGAGGAAGAGGAGCCAGAGCAAAAGCCTTGTCTGAAACCTACTCT 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1162 AAAGAAGAAAAACGAGAAGAACCCATGGAAGAGGAAGAGGAGCCAGAGCAAAAGCCTTGTCTGAAACCTACTCT 1235
Query 1851 GAGGCCCATCAGCTCTGCTCCATCTGTTTCCTCTGCCAGTGGCAATGCAACACCTAACACTCCTGGGGATGAGT 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1236 GAGGCCCATCAGCTCTGCTCCATCTGTTTCCTCTGCCAGTGGCAATGCAACACCTAACACTCCTGGGGATGAGT 1309
Query 1925 CTCCCTGTGGTATTATTATTCCTCATGAAAACTCACCAGATCAACAGCAACCTGAGGAGCATAGGCCAAAAATA 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1310 CTCCCTGTGGTATTATTATTCCTCATGAAAACTCACCAGATCAACAGCAACCTGAGGAGCATAGGCCAAAAATA 1383
Query 1999 GGACTAAGTCTTAAACTGGGTGCTTCCAATAGTCCTGGTCAGCCTAATTCTGTGAAGAGAAAGAAACTACCTGT 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1384 GGACTAAGTCTTAAACTGGGTGCTTCCAATAGTCCTGGTCAGCCTAATTCTGTGAAGAGAAAGAAACTACCTGT 1457
Query 2073 AGATAGTGTCTTTAACAAATTTGAGGATGAAGACAGTGATGACGTACCCCGAAAAAGGAAACTGGTTCCCTTGG 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1458 AGATAGTGTCTTTAACAAATTTGAGGATGAAGACAGTGATGACGTACCCCGAAAAAGGAAACTGGTTCCCTTGG 1531
Query 2147 ATTATGGTGAAGATGATAAAAATGCAACCAAAGGCACTGTAAACACTGAAGAAAAGCGTAAACACATTAAGAGT 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1532 ATTATGGTGAAGATGATAAAAATGCAACCAAAGGCACTGTAAACACTGAAGAAAAGCGTAAACACATTAAGAGT 1605
Query 2221 CTCATTGAGAAAATCCCTACAGCCAAACCTGAGCTCTTCGCTTATCCCCTGGATTGGTCTATTGTGGATTCTAT 2294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1606 CTCATTGAGAAAATCCCTACAGCCAAACCTGAGCTCTTCGCTTATCCCCTGGATTGGTCTATTGTGGATTCTAT 1679
Query 2295 ACTGATGGAACGTCGAATTAGACCATGGATTAATAAGAAAATCATAGAATATATAGGTGAAGAAGAAGCTACAT 2368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1680 ACTGATGGAACGTCGAATTAGACCATGGATTAATAAGAAAATCATAGAATATATAGGTGAAGAAGAAGCTACAT 1753
Query 2369 TAGTTGATTTTGTTTGTTCTAAGGTTATGGCTCATAGTTCACCCCAGAGCATTTTAGATGATGTTGCCATGGTA 2442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1754 TAGTTGATTTTGTTTGTTCTAAGGTTATGGCTCATAGTTCACCCCAGAGCATTTTAGATGATGTTGCCATGGTA 1827
Query 2443 CTTGATGAAGAAGCAGAAGTTTTTATAGTCAAAATGTGGAGATTATTGATATATGAAACAGAAGCCAAGAAAAT 2516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1828 CTTGATGAAGAAGCAGAAGTTTTTATAGTCAAAATGTGGAGATTATTGATATATGAAACAGAAGCCAAGAAAAT 1901
Query 2517 TGGTCTTGTGAAG 2529
|||||||||||||
Sbjct 1902 TGGTCTTGTGAAG 1914
