Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03879
- Subject:
- XM_006533257.3
- Aligned Length:
- 2151
- Identities:
- 1232
- Gaps:
- 723
Alignment
Query 1 ATGGCAGTGTACCGCCTGTGTGTGACCACTGGTCCCTACCTGAGGGCCGGCACACTGGACAACATCTCTGTCAC 74
||||||||.||.||.||||||||||||||||||.|||||||||.|||.||||||.||||.|||||||.||..||
Sbjct 1 ATGGCAGTATATCGGCTGTGTGTGACCACTGGTTCCTACCTGAAGGCTGGCACATTGGATAACATCTATGCTAC 74
Query 75 ACTGGTGGGCACGTGTGGTGAAAGCCCCAAGCAGCGGCTAGATCGAATGGGCAGGGACTTCGCCCCTGGATCGG 148
|.||||.|||||.||||||||||||||.||||||..|||.|||||..|.|||||||||||||||.|||||||||
Sbjct 75 ATTGGTAGGCACCTGTGGTGAAAGCCCTAAGCAGAAGCTGGATCGCGTAGGCAGGGACTTCGCCTCTGGATCGG 148
Query 149 TACAGAAGTACAAGGTGCGTTGCACAGCGGAGCTGGGTGAGCTCTTGCTGCTGCGTGTACACAAGGAGCGCTAC 222
|.||||||||.||||||||.||...|||.||||||||||||.||||||||.||||..|||||||||||||||..
Sbjct 149 TTCAGAAGTATAAGGTGCGCTGTGAAGCAGAGCTGGGTGAGATCTTGCTGTTGCGCTTACACAAGGAGCGCTTT 222
Query 223 GCTTTCTTCCGCAAGGACTCTTGGTACTGTAGCCGCATCTGTGTCACCGAACCGGATGG---TAGTGTATCCCA 293
|||||||||.||||||||.||||||||||.||.||.|||||||||||.|..||.||||| |..||| |||
Sbjct 223 GCTTTCTTCTGCAAGGACCCTTGGTACTGCAGTCGAATCTGTGTCACTGCCCCCGATGGCTCTGCTGT---CCA 293
Query 294 CTTCCCCTGCTATCAGTGGATTGAAGGCTACTGCACCGTGGAGCTGAGGCCAGGAACAGCAAGAACTATTTGTC 367
|||.||||||||.||||||||.||.||||||||.||.|||||||||.|||||||||||||||||||.||.||||
Sbjct 294 CTTTCCCTGCTACCAGTGGATCGATGGCTACTGTACTGTGGAGCTGCGGCCAGGAACAGCAAGAACCATCTGTC 367
Query 368 AGGACTCTCTTCCCCTCCTCCTGGATCACAGGACACGGGAGCTCCGGGCCCGACAAGAATGCTACCGCTGGAAG 441
||||.||||||||||||||.|||||.|||||||.||||||.||||..|||||.||||||||.||.|||||||||
Sbjct 368 AGGATTCTCTTCCCCTCCTTCTGGACCACAGGAAACGGGAACTCCAAGCCCGCCAAGAATGTTATCGCTGGAAG 441
Query 442 ATCTATGCCCCTGGCTTCCCCTGCATGGTAGACGTCAACAGCTTTCAGGAGATGGAGTCAGACAAGAAATTTGC 515
||||..||||||||||||||..|.|||||.||.||||.||||||||||||||||||||||||.|||||||||||
Sbjct 442 ATCTTCGCCCCTGGCTTCCCTCGGATGGTGGATGTCAGCAGCTTTCAGGAGATGGAGTCAGATAAGAAATTTGC 515
Query 516 CTTGACAAAGACGACAACTTGTGTAGACCAGGGTGACAGCAGTGGGAATCGGTACCTGCCCGGCTTCCCCATGA 589
||||||.|||||...|.||||||.|||.||||.|||||.|..||||||.|||||||||||.|||||.||.||||
Sbjct 516 CTTGACCAAGACAGTACCTTGTGCAGAACAGGATGACAACTCTGGGAACCGGTACCTGCCTGGCTTTCCTATGA 589
Query 590 AAATTGACATCCCATCCCTGATGTACATGGAGCCCAATGTTCGATACTCAGCCACCAAGACGATCTCGCTGCTC 663
|.||||||||||||||.|||.||.|||||||.|||||..|||||||||||||||||||||||..|||.|||.||
Sbjct 590 AGATTGACATCCCATCTCTGCTGCACATGGAACCCAACATTCGATACTCAGCCACCAAGACGGCCTCACTGATC 663
Query 664 TTCAATGCCATCCCTGCGTCCTTGGGAATGAAGCTTCGAGGGCTGTTGGATCGCAAGGGCTCCTGGAAGAAGCT 737
|||||.|||.|.|||||.|||||.||.||||||.|||||||.||..||||.|||||||||||||||||||.|||
Sbjct 664 TTCAACGCCCTTCCTGCATCCTTTGGCATGAAGATTCGAGGTCTCCTGGACCGCAAGGGCTCCTGGAAGAGGCT 737
Query 738 GGATGACATGCAGAACATCTTCTGGTGCCATAAGACCTTCACGACAAAGTATGTCACAGAGCACTGGTGTGAAG 811
|||.|||||.|.||||||||||||||||||||||||||||||..||.||||.|||||.|||||.||||||||.|
Sbjct 738 GGACGACATCCGGAACATCTTCTGGTGCCATAAGACCTTCACTTCAGAGTACGTCACCGAGCATTGGTGTGAGG 811
Query 812 ATCA-CTTCTTTGGGTACCAGTACCTGAATGGTGTCAATCCCGTCATGCTCCACTGCATCTCTAGCTTGCCCAG 884
| || |||||||||||||||||||||||||||||||||.||.||||||||.||.|||.||||.|||||||||||
Sbjct 812 A-CAGCTTCTTTGGGTACCAGTACCTGAATGGTGTCAACCCTGTCATGCTTCATTGCCTCTCCAGCTTGCCCAG 884
Query 885 CAAGCTGCCTGTCACCAATGACATGGTGGCCCCCTTGCTGGGA-CAGGACACATGCCTGCAGACAGAGCTAGAG 957
||||||||||||||||||||||||||||||.||.||||||||| |||| |||.|||||.||.||||||||||||
Sbjct 885 CAAGCTGCCTGTCACCAATGACATGGTGGCACCTTTGCTGGGACCAGG-CACCTGCCTACAAACAGAGCTAGAG 957
Query 958 AGGGGGAACATCTTCCTAGCGGACTACTGGATCCTGGCGGAGGCCCCCACCCACTGCCTAAACGGCCGCCAGCA 1031
||||||.||||||||||.|||||||||||||||||||||||||||||...|||.|||.|||||||.|.|||.||
Sbjct 958 AGGGGGCACATCTTCCTGGCGGACTACTGGATCCTGGCGGAGGCCCCAGTCCATTGCATAAACGGTCTCCAACA 1031
Query 1032 GTACGTGGCCGCCCCACTGTGCCTGCTGTGGCTCAGCCCCCAGGGGGCGCTGGTGCCCTTGGCCATCCAGCTCA 1105
||||||..|.||.||.||.||||||.|||||||||.|||.|||||||.||||.||||.|||||.||||||||||
Sbjct 1032 GTACGTAACAGCGCCCCTCTGCCTGTTGTGGCTCAACCCACAGGGGGTGCTGCTGCCATTGGCAATCCAGCTCA 1105
Query 1106 GCCAGACCCCCGGGCCTGACAGCCCCATCTTCCTGCCCACTGACTCCGAATGGGACTGGCTGCTGGCCAAGACG 1179
|||||||.||.|||||.||.|||||||||||.|||||||||||.|.|||.|.||||||||||||||||||||||
Sbjct 1106 GCCAGACACCAGGGCCAGAGAGCCCCATCTTTCTGCCCACTGATTGCGAGTTGGACTGGCTGCTGGCCAAGACG 1179
Query 1180 TGGGTGCGCAACTCTGAGTTCCTGGTGCACGAAAACAACACGCACTTTCTGTGCACGCATTTGCTGTGCGAGGC 1253
||||||||||||||||||||..||||||||||.|||||||||||.||||||||||||||||||||.||||||||
Sbjct 1180 TGGGTGCGCAACTCTGAGTTTTTGGTGCACGAGAACAACACGCATTTTCTGTGCACGCATTTGCTATGCGAGGC 1253
Query 1254 CTTCGCCATGGCCACGCTGCGCCAGCTGCCGCTCTGCCACCCCATCTACAAGCTCCTACTCCCCCACACTCGAT 1327
||||.|||||||.||.|||||.||||||||||||||.||.||..|||||||||||||.||.||.||.|||||.|
Sbjct 1254 CTTCTCCATGGCTACACTGCGTCAGCTGCCGCTCTGTCATCCAGTCTACAAGCTCCTGCTTCCTCATACTCGCT 1327
Query 1328 ACACGCTGCAGGTGAACACCATCGCGAGGGCCACGCTGCTCAACCCCGAGGGCCTCGTGGACCAGGT------- 1394
||||||||||.||||||||||||||.||.|||||||||||||||||.||.||||||||||||.||||
Sbjct 1328 ACACGCTGCAAGTGAACACCATCGCAAGAGCCACGCTGCTCAACCCAGACGGCCTCGTGGACAAGGTGCAGCCT 1401
Query 1395 ------CACGTCCATCGGGAGGCAAGGCCTCATCTACCTCATGAGCACGGGCCTGGCCCACTTCACCTACACCA 1462
||||.|||| ||||||.| ||| ||||..||||.|.||
Sbjct 1402 CCCCGCCACGACCAT--------AAGGCCCC-------------------GCC---CCCAAGTCACGTCCA--- 1442
Query 1463 ATTTCTGCCTTCCGGACAGCCTGCGGGCCCGCGGCGTCCTGGCTATCCCCAACTACCACTACCGAGACGACGGC 1536
||.|
Sbjct 1443 ---TCGG------------------------------------------------------------------- 1446
Query 1537 CTGAAGATCTGGGCGGCCATTGAGAGCTTTGTCTCAGAAATCGTGGGCTACTATTATCCCAGTGACGCATCTGT 1610
Sbjct 1447 -------------------------------------------------------------------------- 1446
Query 1611 GCAGCAGGATTCGGAGCTGCAGGCCTGGACTGGCGAGATTTTTGCTCAGGCGTTCCTGGGCCGGGAAAGCTCAG 1684
Sbjct 1447 -------------------------------------------------------------------------- 1446
Query 1685 GTTTCCCAAGCCGGCTGTGCACCCCAGGAGAGATGGTGAAGTTCCTCACTGCAATCATCTTCAATTGCTCTGCC 1758
Sbjct 1447 -------------------------------------------------------------------------- 1446
Query 1759 CAGCACGCTGCTGTCAACAGTGGGCAGCATGACTTTGGGGCCTGGATGCCCAATGCTCCATCATCCATGAGGCA 1832
Sbjct 1447 -------------------------------------------------------------------------- 1446
Query 1833 GCCCCCACCCCAGACCAAGGGGACCACCACCCTGAAGACTTACCTAGACACCCTCCCTGAAGTGAACATCAGCT 1906
Sbjct 1447 -------------------------------------------------------------------------- 1446
Query 1907 GTAACAACCTCCTCCTCTTCTGGTTGGTTAGCCAAGAACCCAAGGACCAGAGGCCCCTGGGCACCTACCCAGAT 1980
Sbjct 1447 -------------------------------------------------------------------------- 1446
Query 1981 GAGCACTTCACAGAGGAGGCCCCGAGGCGGAGCATCGCCGCCTTCCAGAGCCGCCTGGCCCAGATCTCAAGGGA 2054
Sbjct 1447 -------------------------------------------------------------------------- 1446
Query 2055 CATCCAGGAGCGGAACCAGGGTCTGGCACTGCCCTACACCTACCTGGACCCTCCCCTCATTGAGAACAGCGTCT 2128
Sbjct 1447 -------------------------------------------------------------------------- 1446
Query 2129 CCATC 2133
Sbjct 1447 ----- 1446