Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04181
- Subject:
- XM_017015163.1
- Aligned Length:
- 1802
- Identities:
- 440
- Gaps:
- 1351
Alignment
Query 1 ATGGCCAGCAATCACAAATCTTCAGCAGCTCGCCCTGTTTCAAGAGGTGGAGTTGGGTTAACAGGAAGGCCTCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TTCTGGGATACGACCCCTATCAGGAAATATTCGAGTGGCAACTGCAATGCCACCTGGGACAGCAAGACCAGGTT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CTCGTGGTTGTCCCATAGGGACTGGTGGAGTTCTGTCTTCTCAAATCAAAGTTGCCCATCGCCCTGTAACACAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CAAGGTTTGACTGGAATGAAAACTGGGACGAAAGGTCCCCAGAGGCAAATTTTAGACAAATCTTACTATCTTGG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GCTTCTTAGAAGTAAAATAAGTGAACTTACAACTGAAGTTAATAAACTTCAGAAGGGAATAGAAATGTACAATC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AAGAGAATTCAGTATATTTGTCATATGAAAAGAGGGCTGAGACTTTAGCTGTTGAGATAAAAGAGCTTCAAGGA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CAACTAGCAGACTACAACATGTTGGTAGATAAACTTAATACCAACACTGAAATGGAAGAAGTAATGAATGATTA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CAATATGCTTAAAGCTCAAAATGATCGAGAAACACAAAGTTTGGATGTCATATTTACTGAAAGACAAGCGAAAG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AAAAACAAATCAGAAGTGTCGAAGAAGAAATTGAACAGGAAAAACAAGCAACAGATGACATTATCAAAAATATG 666
|||
Sbjct 1 -----------------------------------------------------------------------ATG 3
Query 667 TCTTTTGAAAACCAAGTCAAGTACCTAGAGATGAAAACCACAAATGAGAAACTGTTACAGGAATTAGATACACT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4 TCTTTTGAAAACCAAGTCAAGTACCTAGAGATGAAAACCACAAATGAGAAACTGTTACAGGAATTAGATACACT 77
Query 741 TCAACAACAATTGGATTCACAGAACATGAAAAAAGAGAGCCTGGAAGCAGAAATAGCTCACTCCCAGGTGAAAC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 78 TCAACAACAATTGGATTCACAGAACATGAAAAAAGAGAGCCTGGAAGCAGAAATAGCTCACTCCCAGGTGAAAC 151
Query 815 AGGAGGCGGTATTGCTGCATGAAAAACTTTATGAGTTGGAGTCCCATCGAGATCAAATGATTGCAGAAGACAAA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 152 AGGAGGCGGTATTGCTGCATGAAAAACTTTATGAGTTGGAGTCCCATCGAGATCAAATGATTGCAGAAGACAAA 225
Query 889 AGCATAGGATCTCCAATGGAAGAGAGAGAGAAATTACTTAAGCAGATTAAAGATGATAATCAGGAAATAGCCAG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 226 AGCATAGGATCTCCAATGGAAGAGAGAGAGAAATTACTTAAGCAGATTAAAGATGATAATCAGGAAATAGCCAG 299
Query 963 CATGGAAAGACAGTTAACAGATACAAAAGAAAAGATAAATCAGTTTATTGAAGAAATTAGACAACTTGACATGG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 CATGGAAAGACAGTTAACAGATACAAAAGAAAAGATAAATCAGTTTATTGAAGAAATTAGACAACTTGACATGG 373
Query 1037 ATTTAGAGGAACACCAA--------GATCC-----TACCAA----CT-------ATGGATGGAAAAT------A 1080
||||||||||||||||| ||.|| || ||| || |.||| ||||.|| |
Sbjct 374 ATTTAGAGGAACACCAAGGTGAAATGAACCAGAAATA-CAAGGAGCTAAAGAAAAGGGA-GGAACATATGGACA 445
Query 1081 CTT-----------------GAAAAAAATA--CAGGAA--GTTTCAAAAAGCA-AGTT---------------- 1116
||| ||||.|||.| |||||| |...|.|||.||| ||.|
Sbjct 446 CTTTTATTGAGACTTTTGAGGAAACAAAGAATCAGGAACTGAAACGAAAGGCACAGATAGAAGCCAACATTGTT 519
Query 1117 -------------------------------------------------------------------------- 1116
Sbjct 520 GCACTCTTGGAGCACTGCAGTCGAAATATAAATCGTATAGAACAGATATCCTCTATCACCAATCAAGAGCTAAA 593
Query 1117 -------------------------------------------------------------------------- 1116
Sbjct 594 GATGATGCAGGATGACCTCAATTTTAAATCTACTGAAGTGCAGAAATCACAAAGTACAGCTCAGAATTTGACTT 667
Query 1117 -------------------------------------------------------------------------- 1116
Sbjct 668 CAGACATTCAACGTCTGCAGTTGGATCTGCAGAAAATGGAGCTTCTAGAAAGTAAGATGACTGAAGAACAGCAT 741
Query 1117 -------------------------------------------------------------------------- 1116
Sbjct 742 TCTCTAAAAAGCAAAATTAAGCAAATGACAACTGATCTGGAGATATATAATGATTTGCCAGCTTTAAAATCATC 815
Query 1117 -------------------------------------------------------------------------- 1116
Sbjct 816 AGGTGAAGAAAAGATAAAGAAATTACATCAGGAGAGAATGATATTATCAACCCACAGAAATGCCTTTAAGAAAA 889
Query 1117 -------------------------------------------------------------------------- 1116
Sbjct 890 TAATGGAGAAGCAAAACATAGAGTATGAGGCACTAAAAACACAATTGCAAGAAAATGAGACACATTCTCAGCTT 963
Query 1117 -------------------------------------------------------------------------- 1116
Sbjct 964 ACAAATTTGGAGAGAAAGTGGCAACACCTTGAGCAAAATAATTTTGCGATGAAAGAATTCATAGCAACCAAGAG 1037
Query 1117 -------------------------------------------------------------------------- 1116
Sbjct 1038 TCAAGAGAGTGATTACCAGCCAATTAAGAAAAATGTGACCAAGCAGATTGCAGAGTACAATAAAACCATCGTGG 1111
Query 1117 -------------------------- 1116
Sbjct 1112 ATGCTTTACATAGCACCAGCGGAAAC 1137
