Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04216
- Subject:
- NR_038198.2
- Aligned Length:
- 1495
- Identities:
- 1021
- Gaps:
- 474
Alignment
Query 1 ----------------------------------------------------------ATGGCCGCCCCGCCGC 16
||||||||||||||||
Sbjct 1 AGTGGTAGTGCTCCAGGCTCGACGGCACCCTCACAGCGCCCGCCCGGCCCTGCCGCTCATGGCCGCCCCGCCGC 74
Query 17 GCCCCGCGCCATCGCCCCCCGCCCCGCGGCGCCTCGACACGAGCGACGTCCTGCAGCAGATCATGGCCATCACC 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCCCCGCGCCATCGCCCCCCGCCCCGCGGCGCCTCGACACGAGCGACGTCCTGCAGCAGATCATGGCCATCACC 148
Query 91 GACCAGAGCCTGGACGAGGCACAGGCCAGAAAGCATGCTCTGAATTGCCATCGGATGAAGCCTGCTCTGTTCAG 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GACCAGAGCCTGGACGAGGCACAGGCCAGAAAGCATGCTCTGAATTGCCATCGGATGAAGCCTGCTCTGTTCAG 222
Query 165 CGTGCTCTGTGAGATCAAGGAAAAGACAGTGGTAAGCATCCGTGGCATTCAAGACGAAGATCCCCCTGACGCCC 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGTGCTCTGTGAGATCAAGGAAAAGACAGTGGTAAGCATCCGTGGCATTCAAGACGAAGATCCCCCTGACGCCC 296
Query 239 AGCTCCTGAGGCTGGATAACATGCTGCTGGCTGAGGGCGTGTGCAGGCCCGAGAAGAGAGGAAGAGGAGGAGCG 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGCTCCTGAGGCTGGATAACATGCTGCTGGCTGAGGGCGTGTGCAGGCCCGAGAAGAGAGGAAGAGGAGGAGCG 370
Query 313 GTGGCCAGGGCCGGCACAGCAACACCAGGTGGCTGTCCAAATGACAATAGCATTGAGCACTCTGACTACAGGGC 386
|||||||||||||||||||||||||
Sbjct 371 GTGGCCAGGGCCGGCACAGCAACAC------------------------------------------------- 395
Query 387 CAAGCTGTCCCAGATCCGACAGATTTACCACTCTGAGCTAGAGAAATATGAACAGGCCTGTCGTGAGTTCACCA 460
||||||||||||||||||||||
Sbjct 396 ----------------------------------------------------CAGGCCTGTCGTGAGTTCACCA 417
Query 461 CGCACGTCACCAACCTCCTCCAGGAGCAGAGCAGGATGAGGCCTGTCTCCCCTAAGGAGATTGAGCGCATGGTC 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 CGCACGTCACCAACCTCCTCCAGGAGCAGAGCAGGATGAGGCCTGTCTCCCCTAAGGAGATTGAGCGCATGGTC 491
Query 535 GGCGCCATTCACGGCAAGTTCAGCGCCATCCAGATGCAGTTGAAGCAGAGCACCTGTGAGGCAGTGATGACCCT 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 492 GGCGCCATTCACGGCAAGTTCAGCGCCATCCAGATGCAGTTGAAGCAGAGCACCTGTGAGGCAGTGATGACCCT 565
Query 609 GCGTTCGCGGCTGCTCGATGCCAGGCGCAAGCGGCGGAATTTCAGCAAGCAGGCGACGGAAGTGCTGAATGAGT 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 566 GCGTTCGCGGCTGCTCGATGCCAGGCGCAAGCGGCGGAATTTCAGCAAGCAGGCGACGGAAGTGCTGAATGAGT 639
Query 683 ATTTTTACTCCCATCTGAACAACCCTTACCCCAGCGAAGAAGCCAAAGAAGAGCTGGCCAGGAAGGGCGGCCTC 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 640 ATTTTTACTCCCATCTGAACAACCCTTACCCCAGCGAAGAAGCCAAAGAAGAGCTGGCCAGGAAGGGCGGCCTC 713
Query 757 ACCATCTCCCAGGTCTCTAACTGGTTTGGCAACAAAAGAATCCGGTATAAAAAGAACATGGGGAAGTTTCAAGA 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 714 ACCATCTCCCAGGTCTCTAACTGGTTTGGCAACAAAAGAATCCGGTATAAAAAGAACATGGGGAAGTTTCAAGA 787
Query 831 AGAGGCTACCATTTACACGGGTAAAACGGCTGTGGATACCACGGAAGTTGGGGTCCCAGGGAACCACGCCAGCT 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 788 AGAGGCTACCATTTACACGGGTAAAACGGCTGTGGATACCACGGAAGTTGGGGTCCCAGGGAACCACGCCAGCT 861
Query 905 GCCTGTCAACACCTAGCTCCGGCTCCTCTGGACCCTTCCCGCTGCCCAGCGCTGGGGACGCCTTCCTCACCCTG 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 862 GCCTGTCAACACCTAGCTCCGGCTCCTCTGGACCCTTCCCGCTGCCCAGCGCTGGGGACGCCTTCCTCACCCTG 935
Query 979 CGGACTCTGGCCTCTCTCCAGCCTCCTCCTGGGGGAGGCTGCCTGCAGTCCCAGGCCCAGGGTAGCTGGCAGGG 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 936 CGGACTCTGGCCTCTCTCCAGCCTCCTCCTGGGGGAGGCTGCCTGCAGTCCCAGGCCCAGGGTAGCTGGCAGGG 1009
Query 1053 GGCCACCCCCCAACCTGCAACTGCCTCACCTGCTGGAGACCCTGGCAGCATCAACTCCAGTACATCTAAT---- 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1010 GGCCACCCCCCAACCTGCAACTGCCTCACCTGCTGGAGACCCTGGCAGCATCAACTCCAGTACATCTAATTAAG 1083
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1084 TTTGGGGGATAAGCAGGAAAGAGCGCTGCGTGAGCTGCCATGTATCGCCAGCCGTTGCTTTGTTACTGAACGTG 1157
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1158 CCGCCGACGACCTCAGAAAACCCAGATGGGTGGTGGTGCCCATGAGCCCCTGCTCCTCAGCCAGGCCCGTGGCG 1231
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1232 CCGGCTCATGTGTCTGCTGCGACTCGAGATGGCCTGAAACGCCACTCATTCTCCCACTTCAGTTCGTTTTTTTG 1305
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1306 ACAGTAATTTTATGGTAACGCTATGAATTGAATTGTCTGTTCTAGGACTGGGCACAGATTTTCCCATTAAAATT 1379
Query 1123 --------------- 1122
Sbjct 1380 TTTGACTTATTTTAA 1394