Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04314
- Subject:
- XM_017009962.1
- Aligned Length:
- 1256
- Identities:
- 682
- Gaps:
- 565
Alignment
Query 1 ATGTCTATTTCCTTGAGCTCTTTAATTTTGTTGCCAATTTGGATAAACATGGCACAAATCCAGCAGGGAGGTCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGATGAAAAAGAAAAGACTACCGCACTGAAAGATTTATTATCTAGGATAGATTTGGATGAACTAATGAAAAAAG 148
||||||||||
Sbjct 1 ----------------------------------------------------------------ATGAAAAAAG 10
Query 149 ATGAACCGCCTCTTGATTTTCCTGATACCCTGGAAGGATTTGAATATGCTTTTAATGAAAAGGGACAGTTAAGA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11 ATGAACCGCCTCTTGATTTTCCTGATACCCTGGAAGGATTTGAATATGCTTTTAATGAAAAGGGACAGTTAAGA 84
Query 223 CACATAAAAACTGGGGAACCATTTGTTTTTAACTACCGGGAAGATTTACACAGATGGAACCAGAAAAGATACGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 85 CACATAAAAACTGGGGAACCATTTGTTTTTAACTACCGGGAAGATTTACACAGATGGAACCAGAAAAGATACGA 158
Query 297 GGCTCTAGGAGAGATCATCACGAAGTATGTATATGAGCTCCTGGAAAAGGATTGTAATTTGAAAAAAGTATCTA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 159 GGCTCTAGGAGAGATCATCACGAAGTATGTATATGAGCTCCTGGAAAAGGATTGTAATTTGAAAAAAGTATCTA 232
Query 371 TTCCAGTAGATGCCACTGAGAGTGAACCAAAGAGTTTTATCTTTATGAGTGAGGATGCTTTGACAAATCCACAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 233 TTCCAGTAGATGCCACTGAGAGTGAACCAAAGAGTTTTATCTTTATGAGTGAGGATGCTTTGACAAATCCACAG 306
Query 445 AAACTGATGGTTTTAATTCATGGTAGTGGTGTTGTCAGGGCAGGGCAGTGGGCTAGAAGACTTATTATAAATGA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 307 AAACTGATGGTTTTAATTCATGGTAGTGGTGTTGTCAGGGCAGGGCAGTGGGCTAGAAGACTTATTATAAATGA 380
Query 519 AGATCTGGACAGTGGCACACAGATACCGTTTATTAAAAGAGCTGTGGCTGAAGGATATGGAGTAATAGTACTAA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 381 AGATCTGGACAGTGGCACACAGATACCGTTTATTAAAAGAGCTGTGGCTGAAGGATATGGAGTAATAGTACTAA 454
Query 593 ATCCCAATGAAAACTATATTGAAGTAGAAAAGCCGAAGATACACGTACAGTCATCATCTGATAGTTCAGATGAA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 455 ATCCCAATGAAAACTATATTGAAGTAGAAAAGCCGAAGATACACGTACAGTCATCATCTGATAGTTCAGATGAA 528
Query 667 CCAGCAGAAAAACGGGAAAGAAAAGATAAAGTTTCTAAAGAAACAAAGAAGCGACGTGATTTCTATGAGAAGTA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 529 CCAGCAGAAAAACGGGAAAGAAAAGATAAAGTTTCTAAAGAAACAAAGAAGCGACGTGATTTCTATGAGAAGTA 602
Query 741 TCGTAACCCCCAAAGAGAAAAAGAAATGATGCAATTGTATATCAGA--------GAAAATGGTTCTCCTGAAGA 806
|||||||||||||||||||||||||||||||||||||||||||||| ||||| ..||| ||| .|||
Sbjct 603 TCGTAACCCCCAAAGAGAAAAAGAAATGATGCAATTGTATATCAGAAGGAGAGTGAAAA-AATTC-CCT-CAGA 673
Query 807 ACATGCAATCTATGTTTGGGATCATTTCATAGCTCAGGCTGCTGCTGAGAATGTGTTTTTCGTTGCTCACAGCT 880
| |.||| ||| .|||.||||||.|.|.|
Sbjct 674 A-----ATTCT-TGT------------------ACAGACTGCTGATAAAA------------------------ 699
Query 881 ATGGAGGACTTGCTTTTGTTGAACTGATGATTCAACGAGAAGCCGATGTAAAAAATAAGGTAACTGCTGTGGCA 954
Sbjct 700 -------------------------------------------------------------------------- 699
Query 955 TTGACAGACTCTGTTCACAATGTGTGGCATCAAGAAGCTGGCAAAACGATTCGAGAATGGATGAGAGAGAACTG 1028
Sbjct 700 -------------------------------------------------------------------------- 699
Query 1029 TTGTAATTGGGTCTCTAGCTCAGAACCATTAGACACATCAGTGGAGTCCATGCTACCTGATTGCCCCCGGGTCT 1102
Sbjct 700 -------------------------------------------------------------------------- 699
Query 1103 CAGCAGGCACCGACCGTCACGAGCTAACTTCCTGGAAGAGCTTTCCGTCTATTTTCAAATTCTTTACCGAAGCC 1176
Sbjct 700 -------------------------------------------------------------------------- 699
Query 1177 TCAGAGGCCAAGACCAGCTCCCTGAAGCCGGCTGTGACGCGCCGCTCCCACCGCATCAAGCACGAAGAGCTG 1248
Sbjct 700 ------------------------------------------------------------------------ 699