Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_04397
• Subject: NM_001290233.2
• Aligned Length: 902
• Identities: 490
• Gaps: 397

Alignment

Query   1  --------------------------------------------------------------------------  0
                                                                                     
Sbjct   1  ATGATACTGACCAAAGCTCAGTACGACGAGATAGCCCAGTGCCTAGTGTCTGTGCCGCCTACCAGGCAGAGCCT  74

Query   1  --------------------------------------------------------------------------  0
                                                                                     
Sbjct  75  GAGGAAGCTGAAGCAGAGGTTTCCCAGTCAATCGCAGGCCACTCTGCTGAGCATCTTCTCCCAGGAGTACCAGA  148

Query   1  --------------------------------------------------------------------------  0
                                                                                     
Sbjct 149  AACACATTAAAAGAACACATGCCAAACATCATACTTCGGAAGCAATTGAAAGTTATTACCAGAGGTACCTGAAT  222

Query   1  ------------------------------------------------------------------------AT  2
                                                                                   ||
Sbjct 223  GGAGTGGTGAAAAATGGAGCTGCCCCAGTGCTCCTGGACCTGGCCAATGAGGTGGACTATGCGCCCTCATTAAT  296

Query   3  GGCTCGGCTTATACTGGAGAGGTTTCTACAGGAACACGAGGAAACTCCACCCTCCAAGTCTATTATAAATAGTA  76
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297  GGCTCGGCTTATACTGGAGAGGTTTCTACAGGAACACGAGGAAACTCCACCCTCCAAGTCTATTATAAATAGTA  370

Query  77  TGCTACGGGACCCTTCTCAGATTCCAGATGGAGTTCTAGCAAATCAGGTCTATCAGTGCATTGTGAACGACTGC  150
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371  TGCTACGGGACCCTTCTCAGATTCCAGATGGAGTTCTAGCAAATCAGGTCTATCAGTGCATTGTGAACGACTGC  444

Query 151  TGTTACGGACCACTAGTGGACTGCATCAAGCATGCCATTGGTCATGAGCATGAGGTCCTGCTGAGAGACTTGCT  224
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445  TGTTACGGACCACTAGTGGACTGCATCAAGCATGCCATTGGTCATGAGCATGAGGTCCTGCTGAGAGACTTGCT  518

Query 225  TCTAGAGAAAAACCTGTCCTTCCTAGATGAAGATCAGCTTCGTGCAAAGGGTTATGACAAAACACCAGACTTCA  298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519  TCTAGAGAAAAACCTGTCCTTCCTAGATGAAGATCAGCTTCGTGCAAAGGGTTATGACAAAACACCAGACTTCA  592

Query 299  TTTTACAAGTACCAGTTGCTGTAGAAGGGCACATAATTCACTGGATTGAAAGCAAAGCCTCATTTGGTGATGAA  372
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593  TTTTACAAGTACCAGTTGCTGTAGAAGGGCACATAATTCACTGGATTGAAAGCAAAGCCTCATTTGGTGATGAA  666

Query 373  TGTAGCCACCACGCCTACCTGCATGACCAGTTCTGGAGCTACTGGAATAGATTTGGGCCAGGCTTAGTCATCT-  445
           |||||||||||||||||||||||||||||||||||||||||||||||||||..||||            |||| 
Sbjct 667  TGTAGCCACCACGCCTACCTGCATGACCAGTTCTGGAGCTACTGGAATAGAGATGGG------------ATCTC  728

Query 446  --ATTGGTATGGATTTATCCAGGAGCTGGACTGCAACCGGGAAAGGGGCATCCT--GCTCAAAGC-------CT  508
             |.||        ||...|||  |||||..||.|||             ||||  ||||  |||       ||
Sbjct 729  ACAATG--------TTCCTCAG--GCTGGTGTGGAAC-------------TCCTGGGCTC--AGCGATTCTTCT  777

Query 509  GTTTC-----CCCA--------------------CG----AACATTGTC-ACC--------TTATGCCACAGCA  544
           |..||     ||||                    ||    ||||||.|| |||        |||||       |
Sbjct 778  GCCTCAGCCACCCAAAGTGCTGGAATTACAGGAGCGAGGAAACATTTTCTACCAGGAATCTTTATG-------A  844

Query 545  TAGCT---------  549
           .|..|         
Sbjct 845  AATGTGTTTGTAAA  858