Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04446
- Subject:
- XM_011519132.1
- Aligned Length:
- 2585
- Identities:
- 978
- Gaps:
- 1573
Alignment
Query 1 ATGGACATACAGCTGGACCCTGCCAGAGATGACCTGCCTCTCATGGCCAACACCAGCCACATACTTGTGAAGCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTATGTACTGGATTTGGATGTGGATTTTGAAAGTCAAGTCATTGAGGGGACCATAGTGCTTTTCCTCGAGGATG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GAAACAGATTCAAGAAACAGAATAGCTCTATTGAGGAAGCCTGCCAATCAGAATCAAACAAAGCCTGCAAATTT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GGGATGCCTGAACCCTGCCATATTCCCGTGACAAATGCAAGGACCTTCTCATCTGAAATGGAATATAATGATTT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGCAATCTGTAGTAAAGGTGAAAAAGATACTTCTGATAAAGATGGTAACCATGACAACCAGGAACATGCTTCTG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GGATTTCTAGCTCAAAGTACTGCTGTGACACAGGGAATCATGGGAGTGAGGATTTTTTGCTAGTGTTGGACTGC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TGTGATTTATCTGTGTTAAAAGTCGAGGAGGTGGATGTTGCTGCTGTGCCAGGTCTGGAAAAATTTACAAGGTC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TCCTGAGCTCACGGTTGTTTCTGAGGAGTTCAGGAATCAGATTGTACGTGAACTTGTGACTTTGCCTGCAAATC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GTTGGAGGGAGCAGTTAGACTATTACGCTCGCTGCAGCCAGGCTCCTGGCTGTGGGGAACTCCTCTTTGACACT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GACACTTGGAGCTTGCAGATAAGGAAGACAGGGGCTCAGACAGCTACTGACTTTCCTCATGCTATCAGGATATG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GTACAAAACTAAACCTGAAGGGCGATCGGTTACATGGACCTCAGACCAGAGTGGCAGGCCATGTGTTTATACTG 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TGGGATCTCCCATAAACAACAGGGCCCTTTTTCCATGCCAGGAGCCACCCGTTGCCATGTCAACATGGCAGGCT 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 ACAGTTCGAGCAGCTGCATCTTTTGTTGTTTTAATGAGTGGGGAAAATTCTGCCAAACCAACGCAGCTTTGGGA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 AGAGTGCTCAAGCTGGTATTACTATGTAACTATGCCAATGCCAGCCTCCACCTTCACAATTGCAGTGGGATGCT 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 GGACAGAAATGAAGATGGAGACATGGTCATCAAATGATTTGGCAACAGAGAGACCCTTCTCACCTTCTGAGGCC 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 AACTTCAGGCATGTTGGTGTTTGCAGTCACATGGAATACCCCTGCCGCTTCCAGAATGCTTCTGCCACCACCCA 1184
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ------------------------------ATGGAATACCCCTGCCGCTTCCAGAATGCTTCTGCCACCACCCA 44
Query 1185 GGAGATCATTCCTCATCGGGTCTTTGCCCCTGTGTGCCTCACGGGTGCCTGCCAAGAGACCCTTCTGCGGCTGA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 45 GGAGATCATTCCTCATCGGGTCTTTGCCCCTGTGTGCCTCACGGGTGCCTGCCAAGAGACCCTTCTGCGGCTGA 118
Query 1259 TCCCTCCTTGCCTCTCAGCAGCACATTCTGTTCTGGGAGCACACCCGTTCTCTCGGCTGGATGTTCTCATCGTC 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 119 TCCCTCCTTGCCTCTCAGCAGCACATTCTGTTCTGGGAGCACACCCGTTCTCTCGGCTGGATGTTCTCATCGTC 192
Query 1333 CCTGCCAACTTTCCAAGTCTGGGGATGGCC-------------------------------------------- 1362
||||||||||||||||||||||||||||||
Sbjct 193 CCTGCCAACTTTCCAAGTCTGGGGATGGCCAGCCCACACATCATGTTCCTCTCTCAGAGCATCTTGACAGGAGG 266
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 267 GAACCATCTCTGTGGGACCCGCCTCTGCCATGAAATTGCCCATGCCTGGTTTGGCCTAGCCATCGGGGCCCGAG 340
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 341 ACTGGACGGAGGAGTGGCTGAGTGAAGGCTTCGCCACTCACTTGGAGGATGTGTTTTGGGCCACAGCACAGCAG 414
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 415 CTGGCCCCCTATGAGGCCCGGGAGCAGCAGGAGCTGAGGGCTTGTCTGCGCTGGCGTCGCCTCCAGGACGAGAT 488
Query 1363 -------------------------------AGACCCAGTAAAGACAAAACTGGCCACACAAGTGACTCGGGAG 1405
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 489 GCAATGCTCCCCCGAGGAGATGCAGGTGTTAAGACCCAGTAAAGACAAAACTGGCCACACAAGTGACTCGGGAG 562
Query 1406 CATCTGTTATCAAGCATGGACTTAATCCGGAGAAGATCTTCATGCAGGTGCATTATTTAAAGGGCTACTTCCTT 1479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 563 CATCTGTTATCAAGCATGGACTTAATCCGGAGAAGATCTTCATGCAGGTGCATTATTTAAAGGGCTACTTCCTT 636
Query 1480 CTTCGGTTTCTTGCCAAAAGACTTGGAGATGAAACCTATTTTTCATTTTTAAGAAAATTTGTGCACACATTTCA 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 637 CTTCGGTTTCTTGCCAAAAGACTTGGAGATGAAACCTATTTTTCATTTTTAAGAAAATTTGTGCACACATTTCA 710
Query 1554 TGGACAGCTGATTCTTTCCCAGGATTTCCTTCAAATGCTACTGGAGAACATTCCAGAAGAAAAAAGGCTTGAGC 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 711 TGGACAGCTGATTCTTTCCCAGGATTTCCTTCAAATGCTACTGGAGAACATTCCAGAAGAAAAAAGGCTTGAGC 784
Query 1628 TGTCTGTTGAAAACATCTACCAAGACTGGCTTGAGAGTTCCGGAATACCAAAGCCGCTGCAGAGGGAGCGTCGC 1701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 785 TGTCTGTTGAAAACATCTACCAAGACTGGCTTGAGAGTTCCGGAATACCAAAGCCGCTGCAGAGGGAGCGTCGC 858
Query 1702 GCCGGGGCGGAGTGCGGGCTTGCGCGGCAAGTGCGCGCCGAGGTCACGAAATGGATTGGAGTGAACCGGAGACC 1775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 859 GCCGGGGCGGAGTGCGGGCTTGCGCGGCAAGTGCGCGCCGAGGTCACGAAATGGATTGGAGTGAACCGGAGACC 932
Query 1776 CCGAAAACGGAAGCGCAGGGAGAAGGAAGAGGTGTTTGAAAAGCTTCTTCCAGACCAGCTGGTCTTGCTTCTGG 1849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 933 CCGAAAACGGAAGCGCAGGGAGAAGGAAGAGGTGTTTGAAAAGCTTCTTCCAGACCAGCTGGTCTTGCTTCTGG 1006
Query 1850 AGCATCTCTTGGAGCAGAAGACTCTGAGCCCCCGAACTCTGCAAAGCCTCCAGAGGACATACCACCTCCAGGAT 1923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1007 AGCATCTCTTGGAGCAGAAGACTCTGAGCCCCCGAACTCTGCAAAGCCTCCAGAGGACATACCACCTCCAGGAT 1080
Query 1924 CAGGATGCAGAGGTTCGCCATCGGTGGTGTGAACTCATTGTTAAGCACAAGTTCACGAAAGCCTACAAAAGTGT 1997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 CAGGATGCAGAGGTTCGCCATCGGTGGTGTGAACTCATTGTTAAGCACAAGTTCACGAAAGCCTACAAAAGTGT 1154
Query 1998 GGAGAGGTTCCTTCAGGAGGATCAGG-----CCA---------------------------------TGGGTG- 2032
|||||||||||||||||||||||||| ||| ||||.|
Sbjct 1155 GGAGAGGTTCCTTCAGGAGGATCAGGAAAGACCACAGCAAGATTCTTTCATTCGTCTCCTCCTAGCCTGGGGGA 1228
Query 2033 ------------------TGTACCTCTACGGGGAGCTGATGGTGAGTGAGGACGCCA------GACAGCAGCAG 2082
||.||.||.|.||.|.|.|.|| |||..||...|.|||| .||||| .|.|
Sbjct 1229 CCAGGCTCGAACTGACCCTGGACATCAAAGGAGGGATTAT-GTGGCTGCTAAAGCCATCGGCCCACAGC-CCTG 1300
Query 2083 CTCGCCCGTAGGTGCTTC---------GAG--CGGACC-----------------AAGGAGCAGA--------- 2119
.||.|...|.|||||||| ||| .||.|| ||| |||||
Sbjct 1301 TTCACATCTTGGTGCTTCTCTTTCCCAGAGGCTGGTCCCAGCCAGGCACACACAAAAG--GCAGATTCTCGTAA 1372
Query 2120 ----------------TGGATAGG-----TCCTCAGCCCAGG---TGGTG----GCCGAAATGTTATTT 2160
||| ||| |||| ||||.|| |||.| ||.|...||..||||
Sbjct 1373 ACGCAGCCTCCCTCCCTGG--AGGCTGCCTCCT--GCCCTGGATCTGGAGTGGAGCTGCTCTGAGATTT 1437
