Construct: ORF ccsbBroadEn_04446

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008869.1_s300c1, BRDN0000457106
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AOPEP (84909)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84909 AOPEP aminopeptidase O (putative) NM_032823.5 100% 100%
2 human 84909 AOPEP aminopeptidase O (putative) XM_017015231.2 100% 100%
3 human 84909 AOPEP aminopeptidase O (putative) XM_005252284.3 92.5% 88.2% (many diffs)
4 human 84909 AOPEP aminopeptidase O (putative) NM_001193329.1 87.9% 87.9% 1363_1659del
5 human 84909 AOPEP aminopeptidase O (putative) XM_006717306.2 87.9% 87.9% 1363_1659del
6 human 84909 AOPEP aminopeptidase O (putative) XM_017015230.2 87.9% 87.9% 1363_1659del
7 human 84909 AOPEP aminopeptidase O (putative) XM_011519121.3 84.4% 82.5% (many diffs)
8 human 84909 AOPEP aminopeptidase O (putative) XM_011519119.2 81.9% 78.2% (many diffs)
9 human 84909 AOPEP aminopeptidase O (putative) XM_017015229.1 81.9% 78.2% (many diffs)
10 human 84909 AOPEP aminopeptidase O (putative) XM_011519120.3 77.4% 73.7% (many diffs)
11 human 84909 AOPEP aminopeptidase O (putative) XR_929853.2 75.8% (many diffs)
12 human 84909 AOPEP aminopeptidase O (putative) XM_017015232.2 74% 73.9% 1363_1659del;2116T>C;2118_2119ins339
13 human 84909 AOPEP aminopeptidase O (putative) XM_011519123.3 73.9% 73.9% 1363_1659del;2115_2116ins342
14 human 84909 AOPEP aminopeptidase O (putative) XR_001746404.2 73.9% 1_218del;1791_1792ins44;2335_2819del
15 human 84909 AOPEP aminopeptidase O (putative) XR_929854.2 73.4% (many diffs)
16 human 84909 AOPEP aminopeptidase O (putative) NM_001193331.3 72.9% 65.8% (many diffs)
17 human 84909 AOPEP aminopeptidase O (putative) XM_011519129.2 72.1% 66.2% (many diffs)
18 human 84909 AOPEP aminopeptidase O (putative) XM_011519122.3 71.5% 67.8% (many diffs)
19 human 84909 AOPEP aminopeptidase O (putative) XR_929857.2 68.2% (many diffs)
20 human 84909 AOPEP aminopeptidase O (putative) XM_011519130.2 66.1% 62.8% (many diffs)
21 human 84909 AOPEP aminopeptidase O (putative) XR_929852.2 64.4% 1_218del;1581_1877del;2676_3350del
22 human 84909 AOPEP aminopeptidase O (putative) XM_011519127.2 64.1% 64.1% 1363_1659del;1874C>A;1875_1876ins582
23 human 84909 AOPEP aminopeptidase O (putative) XM_011519134.3 63.4% 63% 1365_1365delTinsACCCAGTAAAGACAA;1372_1375delTATTinsC;1377_1378ins772
24 human 84909 AOPEP aminopeptidase O (putative) XM_017015237.2 58.7% 55.6% 0_1ins724;71_72ins167
25 human 84909 AOPEP aminopeptidase O (putative) XR_929856.3 58.4% (many diffs)
26 human 84909 AOPEP aminopeptidase O (putative) XR_929855.2 54.4% (many diffs)
27 human 84909 AOPEP aminopeptidase O (putative) XM_017015236.2 53.6% 46.9% (many diffs)
28 human 84909 AOPEP aminopeptidase O (putative) XM_017015235.2 51.6% 48.9% 0_1ins724;71_72ins167;472_768del
29 human 84909 AOPEP aminopeptidase O (putative) XM_017015233.1 48.2% 44.9% (many diffs)
30 human 84909 AOPEP aminopeptidase O (putative) XM_017015234.2 47.4% 41.6% (many diffs)
31 human 84909 AOPEP aminopeptidase O (putative) XM_011519132.1 37.8% 34.6% (many diffs)
32 human 84909 AOPEP aminopeptidase O (putative) XR_001746402.2 32.9% 1_218del;1581_1877del;2676_6560del
33 human 84909 AOPEP aminopeptidase O (putative) XR_001746403.2 31% 1_218del;1791_1792ins44;2335_6781del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2226
ORF length:
2160
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA CATACAGCTG GACCCTGCCA GAGATGACCT GCCTCTCATG GCCAACACCA
121GCCACATACT TGTGAAGCAC TATGTACTGG ATTTGGATGT GGATTTTGAA AGTCAAGTCA
181TTGAGGGGAC CATAGTGCTT TTCCTCGAGG ATGGAAACAG ATTCAAGAAA CAGAATAGCT
241CTATTGAGGA AGCCTGCCAA TCAGAATCAA ACAAAGCCTG CAAATTTGGG ATGCCTGAAC
301CCTGCCATAT TCCCGTGACA AATGCAAGGA CCTTCTCATC TGAAATGGAA TATAATGATT
361TTGCAATCTG TAGTAAAGGT GAAAAAGATA CTTCTGATAA AGATGGTAAC CATGACAACC
421AGGAACATGC TTCTGGGATT TCTAGCTCAA AGTACTGCTG TGACACAGGG AATCATGGGA
481GTGAGGATTT TTTGCTAGTG TTGGACTGCT GTGATTTATC TGTGTTAAAA GTCGAGGAGG
541TGGATGTTGC TGCTGTGCCA GGTCTGGAAA AATTTACAAG GTCTCCTGAG CTCACGGTTG
601TTTCTGAGGA GTTCAGGAAT CAGATTGTAC GTGAACTTGT GACTTTGCCT GCAAATCGTT
661GGAGGGAGCA GTTAGACTAT TACGCTCGCT GCAGCCAGGC TCCTGGCTGT GGGGAACTCC
721TCTTTGACAC TGACACTTGG AGCTTGCAGA TAAGGAAGAC AGGGGCTCAG ACAGCTACTG
781ACTTTCCTCA TGCTATCAGG ATATGGTACA AAACTAAACC TGAAGGGCGA TCGGTTACAT
841GGACCTCAGA CCAGAGTGGC AGGCCATGTG TTTATACTGT GGGATCTCCC ATAAACAACA
901GGGCCCTTTT TCCATGCCAG GAGCCACCCG TTGCCATGTC AACATGGCAG GCTACAGTTC
961GAGCAGCTGC ATCTTTTGTT GTTTTAATGA GTGGGGAAAA TTCTGCCAAA CCAACGCAGC
1021TTTGGGAAGA GTGCTCAAGC TGGTATTACT ATGTAACTAT GCCAATGCCA GCCTCCACCT
1081TCACAATTGC AGTGGGATGC TGGACAGAAA TGAAGATGGA GACATGGTCA TCAAATGATT
1141TGGCAACAGA GAGACCCTTC TCACCTTCTG AGGCCAACTT CAGGCATGTT GGTGTTTGCA
1201GTCACATGGA ATACCCCTGC CGCTTCCAGA ATGCTTCTGC CACCACCCAG GAGATCATTC
1261CTCATCGGGT CTTTGCCCCT GTGTGCCTCA CGGGTGCCTG CCAAGAGACC CTTCTGCGGC
1321TGATCCCTCC TTGCCTCTCA GCAGCACATT CTGTTCTGGG AGCACACCCG TTCTCTCGGC
1381TGGATGTTCT CATCGTCCCT GCCAACTTTC CAAGTCTGGG GATGGCCAGA CCCAGTAAAG
1441ACAAAACTGG CCACACAAGT GACTCGGGAG CATCTGTTAT CAAGCATGGA CTTAATCCGG
1501AGAAGATCTT CATGCAGGTG CATTATTTAA AGGGCTACTT CCTTCTTCGG TTTCTTGCCA
1561AAAGACTTGG AGATGAAACC TATTTTTCAT TTTTAAGAAA ATTTGTGCAC ACATTTCATG
1621GACAGCTGAT TCTTTCCCAG GATTTCCTTC AAATGCTACT GGAGAACATT CCAGAAGAAA
1681AAAGGCTTGA GCTGTCTGTT GAAAACATCT ACCAAGACTG GCTTGAGAGT TCCGGAATAC
1741CAAAGCCGCT GCAGAGGGAG CGTCGCGCCG GGGCGGAGTG CGGGCTTGCG CGGCAAGTGC
1801GCGCCGAGGT CACGAAATGG ATTGGAGTGA ACCGGAGACC CCGAAAACGG AAGCGCAGGG
1861AGAAGGAAGA GGTGTTTGAA AAGCTTCTTC CAGACCAGCT GGTCTTGCTT CTGGAGCATC
1921TCTTGGAGCA GAAGACTCTG AGCCCCCGAA CTCTGCAAAG CCTCCAGAGG ACATACCACC
1981TCCAGGATCA GGATGCAGAG GTTCGCCATC GGTGGTGTGA ACTCATTGTT AAGCACAAGT
2041TCACGAAAGC CTACAAAAGT GTGGAGAGGT TCCTTCAGGA GGATCAGGCC ATGGGTGTGT
2101ACCTCTACGG GGAGCTGATG GTGAGTGAGG ACGCCAGACA GCAGCAGCTC GCCCGTAGGT
2161GCTTCGAGCG GACCAAGGAG CAGATGGATA GGTCCTCAGC CCAGGTGGTG GCCGAAATGT
2221TATTTTACCC AACTTTCTTG TACAAAGTTG Gcattataag aaagcattgc ttatcaattt
2281gttgcaacga ac

Download FASTA (ORF) (Full)

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