Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04446
- Subject:
- XM_017015236.2
- Aligned Length:
- 2288
- Identities:
- 1227
- Gaps:
- 1027
Alignment
Query 1 ATGGACATACAGCTGGACCCTGCCAGAGATGACCTGCCTCTCATGGCCAACACCAGCCACATACTTGTGAAGCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTATGTACTGGATTTGGATGTGGATTTTGAAAGTCAAGTCATTGAGGGGACCATAGTGCTTTTCCTCGAGGATG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GAAACAGATTCAAGAAACAGAATAGCTCTATTGAGGAAGCCTGCCAATCAGAATCAAACAAAGCCTGCAAATTT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GGGATGCCTGAACCCTGCCATATTCCCGTGACAAATGCAAGGACCTTCTCATCTGAAATGGAATATAATGATTT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGCAATCTGTAGTAAAGGTGAAAAAGATACTTCTGATAAAGATGGTAACCATGACAACCAGGAACATGCTTCTG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GGATTTCTAGCTCAAAGTACTGCTGTGACACAGGGAATCATGGGAGTGAGGATTTTTTGCTAGTGTTGGACTGC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TGTGATTTATCTGTGTTAAAAGTCGAGGAGGTGGATGTTGCTGCTGTGCCAGGTCTGGAAAAATTTACAAGGTC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TCCTGAGCTCACGGTTGTTTCTGAGGAGTTCAGGAATCAGATTGTACGTGAACTTGTGACTTTGCCTGCAAATC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GTTGGAGGGAGCAGTTAGACTATTACGCTCGCTGCAGCCAGGCTCCTGGCTGTGGGGAACTCCTCTTTGACACT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GACACTTGGAGCTTGCAGATAAGGAAGACAGGGGCTCAGACAGCTACTGACTTTCCTCATGCTATCAGGATATG 740
||||||||||||||||
Sbjct 1 ----------------------------------------------------------ATGCTATCAGGATATG 16
Query 741 GTACAAAACTAAACCTGAAGGGCGATCGGTTACATGGACCTCAGACCAGAGTGGCAGGCCATGTGTTTATACTG 814
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17 GTACAAAACTAAACCTGAAGGGCGATCGGTTACATGGACCTCAGACCAGAGTGGC------------------- 71
Query 815 TGGGATCTCCCATAAACAACAGGGCCCTTTTTCCATGCCAGGAGCCACCCGTTGCCATGTCAACATGGCAGGCT 888
Sbjct 72 -------------------------------------------------------------------------- 71
Query 889 ACAGTTCGAGCAGCTGCATCTTTTGTTGTTTTAATGAGTGGGGAAAATTCTGCCAAACCAACGCAGCTTTGGGA 962
Sbjct 72 -------------------------------------------------------------------------- 71
Query 963 AGAGTGCTCAAGCTGGTATTACTATGTAACTATGCCAATGCCAGCCTCCACCTTCACAATTGCAGTGGGATGCT 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 72 AGAGTGCTCAAGCTGGTATTACTATGTAACTATGCCAATGCCAGCCTCCACCTTCACAATTGCAGTGGGATGCT 145
Query 1037 GGACAGAAATGAAGATGGAGACATGGTCATCAAATGATTTGGCAACAGAGAGACCCTTCTCACCTTCTGAGGCC 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 146 GGACAGAAATGAAGATGGAGACATGGTCATCAAATGATTTGGCAACAGAGAGACCCTTCTCACCTTCTGAGGCC 219
Query 1111 AACTTCAGGCATGTTGGTGTTTGCAGTCACATGGAATACCCCTGCCGCTTCCAGAATGCTTCTGCCACCACCCA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 220 AACTTCAGGCATGTTGGTGTTTGCAGTCACATGGAATACCCCTGCCGCTTCCAGAATGCTTCTGCCACCACCCA 293
Query 1185 GGAGATCATTCCTCATCGGGTCTTTGCCCCTGTGTGCCTCACGGGTGCCTGCCAAGAGACCCTTCTGCGGCTGA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 294 GGAGATCATTCCTCATCGGGTCTTTGCCCCTGTGTGCCTCACGGGTGCCTGCCAAGAGACCCTTCTGCGGCTGA 367
Query 1259 TCCCTCCTTGCCTCTCAGCAGCACATTCTGTTCTGGGAGCACACCCGTTCTCTCGGCTGGATGTTCTCATCGTC 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 368 TCCCTCCTTGCCTCTCAGCAGCACATTCTGTTCTGGGAGCACACCCGTTCTCTCGGCTGGATGTTCTCATCGTC 441
Query 1333 CCTGCCAACTTTCCAAGTCTGGGGATGGCCAGACCCAGTAAAGACAAAACTGGCCACACAAGTGACTCGGGAGC 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 CCTGCCAACTTTCCAAGTCTGGGGATGGCCAGACCCAGTAAAGACAAAACTGGCCACACAAGTGACTCGGGAGC 515
Query 1407 ATCTGTTATCAAGCATGGACTTAATCCGGAGAAGATCTTCATGCAGGTGCATTATTTAAAGGGCTACTTCCTTC 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 516 ATCTGTTATCAAGCATGGACTTAATCCGGAGAAGATCTTCATGCAGGTGCATTATTTAAAGGGCTACTTCCTTC 589
Query 1481 TTCGGTTTCTTGCCAAAAGACTTGGAGATGAAACCTATTTTTCATTTTTAAGAAAATTTGTGCACACATTTCAT 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 590 TTCGGTTTCTTGCCAAAAGACTTGGAGATGAAACCTATTTTTCATTTTTAAGAAAATTTGTGCACACATTTCAT 663
Query 1555 GGACAGCTGATTCTTTCCCAGGATTTCCTTCAAATGCTACTGGAGAACATTCCAGAAGAAAAAAGGCTTGAGCT 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 664 GGACAGCTGATTCTTTCCCAGGATTTCCTTCAAATGCTACTGGAGAACATTCCAGAAGAAAAAAGGCTTGAGCT 737
Query 1629 GTCTGTTGAAAACATCTACCAAGACTGGCTTGAGAGTTCCGGAATACCAAAGCCGCTGCAGAGGGAGCGTCGCG 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 738 GTCTGTTGAAAACATCTACCAAGACTGGCTTGAGAGTTCCGGAATACCAAAGCCGCTGCAGAGGGAGCGTCGCG 811
Query 1703 CCGGGGCGGAGTGCGGGCTTGCGCGGCAAGTGCGCGCCGAGGTCACGAAATGGATTGGAGTGAACCGGAGACCC 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 812 CCGGGGCGGAGTGCGGGCTTGCGCGGCAAGTGCGCGCCGAGGTCACGAAATGGATTGGAGTGAACCGGAGACCC 885
Query 1777 CGAAAACGGAAGCGCAGGGAGAAGGAAGAGGTGTTTGAAAAGCTTCTTCCAGACCAGCTGGTCTTGCTTCTGGA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 886 CGAAAACGGAAGCGCAGGGAGAAGGAAGAGGTGTTTGAAAAGCTTCTTCCAGACCAGCTGGTCTTGCTTCTGGA 959
Query 1851 GCATCTCTTGGAGCAGAAGACTCTGAGCCCCCGAACTCTGCAAAGCCTCCAGAGGACATACCACCTCCAGGATC 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 GCATCTCTTGGAGCAGAAGACTCTGAGCCCCCGAACTCTGCAAAGCCTCCAGAGGACATACCACCTCCAGGATC 1033
Query 1925 AGGATGCAGAGGTTCGCCATCGGTGGTGTGAACTCATTGTTAAGCACAAGTTCACGAAAGCCTACAAAAGTGTG 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034 AGGATGCAGAGGTTCGCCATCGGTGGTGTGAACTCATTGTTAAGCACAAGTTCACGAAAGCCTACAAAAGTGTG 1107
Query 1999 GAGAGGTTCCTTCAGGAGGATCAGG-----CCA---------------------------------TGGGTG-- 2032
||||||||||||||||||||||||| ||| ||||.|
Sbjct 1108 GAGAGGTTCCTTCAGGAGGATCAGGAAAGACCACAGCAAGATTCTTTCATTCGTCTCCTCCTAGCCTGGGGGAC 1181
Query 2033 -----------------TGTACCTCTACGGGGAGCTGATGGTGAGTGAGGACGCCA------GACAGCAGCAGC 2083
||.||.||.|.||.|.|.|.|| |||..||...|.|||| .||||| .|.|.
Sbjct 1182 CAGGCTCGAACTGACCCTGGACATCAAAGGAGGGATTAT-GTGGCTGCTAAAGCCATCGGCCCACAGC-CCTGT 1253
Query 2084 TCGCCCGTAGGTGCTTC---------GAG--CGGACC-----------------AAGGAGCAGA---------- 2119
||.|...|.|||||||| ||| .||.|| ||| |||||
Sbjct 1254 TCACATCTTGGTGCTTCTCTTTCCCAGAGGCTGGTCCCAGCCAGGCACACACAAAAG--GCAGATTCTCGTAAA 1325
Query 2120 ---------------TGGATAGG-----TCCTCAGCCCAGG---TGGTG----GCCGAAATGTTATTT 2160
||| ||| |||| ||||.|| |||.| ||.|...||..||||
Sbjct 1326 CGCAGCCTCCCTCCCTGG--AGGCTGCCTCCT--GCCCTGGATCTGGAGTGGAGCTGCTCTGAGATTT 1389
