Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04659
- Subject:
- XM_006524095.3
- Aligned Length:
- 1925
- Identities:
- 879
- Gaps:
- 919
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGTAACAGCCACCCTCTTCGCCCCTTTACTGCAGTGGGGGAAATCGATCATGTGCACATTTTGTCTGAGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATTGGTGCCTTGTTGATTGGTGAAGAATATGGTGATGTCACGTTTGTTGTGGAAAAGAAGCACTTTCCTGCCC 148
Query 1 --------------------ATGTGC---------AGAGCATTATTATATGGTGGAATGCGAGAGTCTCAGCCT 45
|.|||| .||||||||.|.|||||.||.|||||||||||.|||||.
Sbjct 149 ACAGGGTAATTTTAGCAGCGAGGTGCCAATATTTTCGAGCATTACTGTATGGCGGGATGCGAGAGTCGCAGCCC 222
Query 46 GAAGCAGAAATTCCTCTCCAAGACACCACTGCAGAAGCATTCACAATGCTACTCAAATATATCTACACTGGGCG 119
||||||||.||.|||||||||||||||||.||.||.||.|||||.|||||.||||.||||||||||||.|||||
Sbjct 223 GAAGCAGAGATCCCTCTCCAAGACACCACGGCCGAGGCTTTCACGATGCTCCTCAGATATATCTACACGGGGCG 296
Query 120 GGCAACGCTGACAGATGAGAAGGAGGAGGTGCTGCTGGACTTTTTGAGCCTGGCTCATAAATATGGATTTCCAG 193
|||.|||||.||.|||||||||||||||||||||||||||||..|||||||||||||.|||||.||||||||||
Sbjct 297 GGCGACGCTCACTGATGAGAAGGAGGAGGTGCTGCTGGACTTCCTGAGCCTGGCTCACAAATACGGATTTCCAG 370
Query 194 AGCTAGAGGATTCTACCTCTGAGTATCTCTGCACCATACTTAACATTCAGAATGTCTGCATGACTTTTGATGTT 267
||||.|||||.|||||.|||||||||||||||||||||||.|||||||||||||||||.|||||.|||||||||
Sbjct 371 AGCTGGAGGACTCTACTTCTGAGTATCTCTGCACCATACTGAACATTCAGAATGTCTGTATGACCTTTGATGTT 444
Query 268 GCCAGTCTCTACTCACTTCCCAAGTTAACTTGTATGTGCTGCATGTTTATGGATAGGAATGCTCAGGAAGTCCT 341
||||||||||||||.||||||||||||||||||||||||||||||||.|||||.||.|||||||||||.||.||
Sbjct 445 GCCAGTCTCTACTCGCTTCCCAAGTTAACTTGTATGTGCTGCATGTTCATGGACAGAAATGCTCAGGAGGTGCT 518
Query 342 CTCAAGTGAAGGTTTCCTCTCCCTTTCTAAGACAGCACTTTTAAACATCGTGTTAAGAGACTCATTTGCAGCTC 415
..|.||.||.||.|||||||||||.||.|||||||||||..|.||.|||||.||||||||.||.|||||.||||
Sbjct 519 GGCCAGCGACGGCTTCCTCTCCCTGTCCAAGACAGCACTCCTGAATATCGTCTTAAGAGATTCGTTTGCTGCTC 592
Query 416 CCGAAAAAGATATTTTCCTAGCCTTATTAAACTGGTGTAAGCACAATTCAAAGGAGAATCATGCTGAAATCATG 489
|.||.||||||||||||.|||||||.|||||||||||||||||||||.||||.|||||||||||||||||||||
Sbjct 593 CTGAGAAAGATATTTTCTTAGCCTTGTTAAACTGGTGTAAGCACAATGCAAAAGAGAATCATGCTGAAATCATG 666
Query 490 CAGGCTGTGCGTTTACCTCTCATGAGCCTCACAGAGCTTCTGAATGTTGTGAGGCCTTCAGGACTGCTGTCTCC 563
|||||||||||.||||||||.|||||||||||.|||||||||||.||.||||||||.||||||||..|||||||
Sbjct 667 CAGGCTGTGCGCTTACCTCTAATGAGCCTCACTGAGCTTCTGAACGTCGTGAGGCCATCAGGACTCTTGTCTCC 740
Query 564 TGATGCCATCCTGGATGCCATTAAAGTGCGATCTGAGAGCCGGGATATGGACCTCAATTATAGAGGCATGCTCA 637
.|||||.||.||.||||||||.||||||||.||.|||||||||||||||||||||||.||.|||||||||||||
Sbjct 741 GGATGCTATTCTTGATGCCATCAAAGTGCGGTCGGAGAGCCGGGATATGGACCTCAACTACAGAGGCATGCTCA 814
Query 638 TACCAGAAGAAAACATTGCAACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGAGCTGAAATCAGCCTTATTA 711
||||.|||||||||||||||||||||||||||||.||.||.|||||.||.||.||||||||.||.|||||..|.
Sbjct 815 TACCTGAAGAAAACATTGCAACTATGAAGTATGGGGCTCAGGTTGTGAAAGGAGAGCTGAAGTCGGCCTTGCTG 888
Query 712 GATGGTGATACTCAAAATTATGATTTGGATCATGGATTTTCAAGGCACCCAATTGATGATGACTGCCGTTCCGG 785
||||||||.||||||||.|||||.|||||||||||||||||..|||||||.|||||||||||||||||.||.||
Sbjct 889 GATGGTGACACTCAAAACTATGACTTGGATCATGGATTTTCCCGGCACCCCATTGATGATGACTGCCGCTCTGG 962
Query 786 CATCGAGATTAAGCTAGGTCAGCCATCCATTATCAATCACATACGGATACTCTTGTGGGACCGAGATAGCCGGT 859
|||.|||||.|||||.||.|||||.||||||||.||.||||||||..|||||.||||||||||.||.|||||||
Sbjct 963 CATTGAGATCAAGCTTGGCCAGCCGTCCATTATAAACCACATACGTCTACTCCTGTGGGACCGTGACAGCCGGT 1036
Query 860 CTTACTCATACTTCATTGAAGTGTCAATGGATGAACTTGATTGGGTCAGAGTGATAGATCATTCACAATATCTG 933
||||.||.|||||.|||||||||||.|||||.||||||||||||.||||||||||.|||||.|||||.||.|||
Sbjct 1037 CTTATTCCTACTTTATTGAAGTGTCCATGGACGAACTTGATTGGATCAGAGTGATCGATCACTCACATTACCTG 1110
Query 934 TGTCGTTCTTGGCAGAAATTATATTTTCCAGCCCGTGTCTGCAG--TGGAGATGGAGTCTCACTATGGTGCCCA 1005
|||||.||||||||.||.||.|||||.||||||||||||||||| ||.|||| |||
Sbjct 1111 TGTCGGTCTTGGCAAAAGTTGTATTTCCCAGCCCGTGTCTGCAGTCTGCAGAT-GAG----------------- 1166
Query 1006 CTCTGGTCTCGAACTCCTGAGCTCAAGCAATCCTCCCTCCTTGGCCTTCCAAAGTGCAGGTATATTCGAATTGT 1079
|||||| |.|..||||| |||
Sbjct 1167 --CTGGTC---AGCCTCTGAG---AAG----------------------------------------------- 1185
Query 1080 TGGGACTCACAACACAGTGAACAAGATTTTTCACATTGTGGCTTTTGAATGTATGTTTACAAACAAAACCTTCA 1153
Sbjct 1186 -------------------------------------------------------------------------- 1185
Query 1154 CTCTTGAGAAGGGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTGTGATTGAAGGA 1227
Sbjct 1186 -------------------------------------------------------------------------- 1185
Query 1228 GTCAGTCGGAGCCGAAATGCCTTGCTGAATGGGGACACTAAGAATTATGACTGGGATTCTGGCTACACATGTCA 1301
Sbjct 1186 -------------------------------------------------------------------------- 1185
Query 1302 CCAGCTAGGAAGTGGTGCGATTGTGGTTCAGTTGGCACAACCGTACATGATTGGGTCAATACGGTTACTACTTT 1375
Sbjct 1186 -------------------------------------------------------------------------- 1185
Query 1376 GGGATTGTGATGATCGAAGCTATAGCTACTACGTTGAGGTTTCTACCAACCAGCAACAGTGGACCATGGTTGCT 1449
Sbjct 1186 -------------------------------------------------------------------------- 1185
Query 1450 GACAGAACTAAAGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCATCCGTAT 1523
Sbjct 1186 -------------------------------------------------------------------------- 1185
Query 1524 CGTTGGGACACACAACACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGAGTGTCCAGAGCAGCAGAGCAGCC 1597
Sbjct 1186 -------------------------------------------------------------------------- 1185
Query 1598 AGAAGGAGGAAAATAGTGAGGAATCGGGGACAGGGGACACCAGCCTGGCCGGTCAGCAGCTCGACTCCCATGCG 1671
Sbjct 1186 -------------------------------------------------------------------------- 1185
Query 1672 CTGCGGGCGCCTAGTGGCAGCTCACTACCCTCCAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGCAGCACCA 1745
Sbjct 1186 -------------------------------------------------------------------------- 1185
Query 1746 A 1746
Sbjct 1186 - 1185
