Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04781
- Subject:
- XM_017312996.1
- Aligned Length:
- 1522
- Identities:
- 947
- Gaps:
- 446
Alignment
Query 1 ATGGCTTCTGGGGACCTTTACGAGGTTGAAAGGATTGTAGACAAGAGGAAGAACAAGAAAGGAAAATGGGAGTA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TCTTATCCGATGGAAAGGCTACGGGAGCACCGAGGACACGTGGGAGCCGGAGCACCACCTCTTGCACTGTGAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AGTTTATTGATGAATTCAATGGGTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGTACC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCCAAGCTGCTGCGTGACAGTCGAGGCCCGTCGGTTGAGAAACTGTCCCACAGACCTTCAGATCCTGGAAAGAG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAAGGGGACCTCCCATAAACGGAAGCGAATTAACCCTCCCCTGGCCAAGCCAAAAAAAGGGTATTCAGGCAAGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CCTCTTCAGGAGGTGACAGGGCCACCAAGACGGTGTCTTACAGGACTACCCCCAGTGGTTTGCAAATAATGCCC 444
||||||
Sbjct 1 --------------------------------------------------------------------ATGCCC 6
Query 445 CTGAAAAAGTCTCAGAACGGGATGGAAAATGGGGACGCCGGCTCTGAGAAGGATGAGAGGCACTTTGGAAATGG 518
|||||.|||.||||||||||..||||.||.||.||.|||||||||||||||||.|||...|||||||||||.||
Sbjct 7 CTGAAGAAGGCTCAGAACGGCCTGGAGAACGGAGATGCCGGCTCTGAGAAGGACGAGTCACACTTTGGAAACGG 80
Query 519 GTCCCATCAGCCTGGCT-TGGATTTGAATGATCATGTTGGAGAGCAAGATATGG---GTGAATGTGACGTGAAT 588
|||||||||||| ||.| ||||.|||||.||.||..||||||||||.|| || ||||.||.||||.||..
Sbjct 81 GTCCCATCAGCC-GGATCTGGAGTTGAACGACCAGCTTGGAGAGCAGGA---GGCCAGTGACTGCGACGGGACC 150
Query 589 CACGCTACACTGGCGGAGAACGGGCTCGGCTCTGCTCTGACCAACGGGGGATTGAACCTGCACAGTCCAGTGAA 662
|||.|..|.||||.||||||.||..|.|||||||||||||||||.||.||..|||||||||||||.||.|||||
Sbjct 151 CACTCCGCGCTGGTGGAGAATGGAGTTGGCTCTGCTCTGACCAATGGAGGCCTGAACCTGCACAGCCCTGTGAA 224
Query 663 GAGGAAGCTGGAAGCGGAGAAGGACTACGTCTTTGACAAAAGGCTCAGATACAGTGTCCGCCAGAATGAAAGCA 736
||||||||||||..|||||||||||||.||||||||||||||||||||.|||||.|||||||||||||||||||
Sbjct 225 GAGGAAGCTGGAGACGGAGAAGGACTATGTCTTTGACAAAAGGCTCAGGTACAGCGTCCGCCAGAATGAAAGCA 298
Query 737 ACTGTCGGTTTCGAGACATCGTTGTGCGGAAGGAAGAAGGGTTCACGCACATCCTGCTGTCCAGTCAGACCTCG 810
|||||||||||||.||||||||.|||.||||||||||.||.|||||.|||||.||.||||||||.|||||.|||
Sbjct 299 ACTGTCGGTTTCGTGACATCGTGGTGAGGAAGGAAGAGGGCTTCACACACATTCTTCTGTCCAGCCAGACTTCG 372
Query 811 GATAACAATGCCCTGACACCTGAGATCATGAAAGAAGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACGACAG 884
|||||||||||.|||||.||||||||||||||.||||||||||||||.||.||||||||.||||||||.|||||
Sbjct 373 GATAACAATGCACTGACTCCTGAGATCATGAAGGAAGTCCGGCGAGCCCTGTGCAACGCGGCCACAGATGACAG 446
Query 885 CAAACTGCTGCTCCTCAGCGCAGTGGGGAGCGTGTTCTGCAGCGGCCTGGATTATTCCTACCTAATTGGCCGGT 958
|||.||.|||||.|||||.||.|||||.||.||||||||||||||.||.||.|||||||||||.||.||||||.
Sbjct 447 CAAGCTACTGCTGCTCAGTGCCGTGGGCAGTGTGTTCTGCAGCGGACTAGACTATTCCTACCTGATCGGCCGGC 520
Query 959 TGTCCAGCGACCGGCGAAAGGAGAGCACTCGGATTGCAGAAGCCATCAGGGACTTTGTGAAGGCCTTTATCCAG 1032
||||||||||||||.||||||||||||||||.||.||||||||.|||||||||||.||||||||||||||||||
Sbjct 521 TGTCCAGCGACCGGAGAAAGGAGAGCACTCGAATCGCAGAAGCTATCAGGGACTTCGTGAAGGCCTTTATCCAG 594
Query 1033 TTTAAGAAGCCTATCGTGGTGGCCATCAATGGGCCGGCCCTGGGCCTGGGTGCCTCCATCCTGCCCCTCTGTGA 1106
||||||||.||.||||||||.|||||.||||||||.||..||||||||||.|||||||||||||||||||||||
Sbjct 595 TTTAAGAAACCCATCGTGGTAGCCATTAATGGGCCAGCATTGGGCCTGGGAGCCTCCATCCTGCCCCTCTGTGA 668
Query 1107 CATCGTGTGGGCCAGTGAGAAGGCCTGGTTCCAGACGCCCTACGCCACCATCCGCCTCACGCCTGCTGGCTGCT 1180
||||||.|||||||||||||||||||||||.|||||.||.|||||.||||||||.|||||||||||||||||.|
Sbjct 669 CATCGTATGGGCCAGTGAGAAGGCCTGGTTTCAGACACCATACGCTACCATCCGACTCACGCCTGCTGGCTGTT 742
Query 1181 CCTCCTACACCTTCCCCCAGATCCTGGGCGTCGCGCTGGCCAATGAGATGCTGTTCTGTGGGCGGAAGCTCACC 1254
||||||||||||||||||||||||||||.||.||||||||||||||.||||||||.|||||||||||.|||||.
Sbjct 743 CCTCCTACACCTTCCCCCAGATCCTGGGTGTGGCGCTGGCCAATGAAATGCTGTTTTGTGGGCGGAAACTCACT 816
Query 1255 GCCCAGGAGGCCTGCAGCAGGGGGCTGGTGTCGCAGGTCTTCTGGCCCACCACGTTCAGCCAGGAGGTCATGCT 1328
|||||.|||||.||||||.||||.||.|||||.|||||||||||||||||.||.||||||||.|||||||||||
Sbjct 817 GCCCAAGAGGCATGCAGCCGGGGCCTTGTGTCACAGGTCTTCTGGCCCACGACTTTCAGCCAAGAGGTCATGCT 890
Query 1329 GCGGGTCAAGGAGATGGCATCCTGCAGTGCCGTGGTGTTAGAGGAGTCCAAATGCCTCGTGCGGAGCTTCCTGA 1402
||||||.||||||||||||||.||||||||.|||||.||.|||||||||||||||||.||.||.||||||||||
Sbjct 891 GCGGGTGAAGGAGATGGCATCTTGCAGTGCTGTGGTTTTGGAGGAGTCCAAATGCCTGGTCCGAAGCTTCCTGA 964
Query 1403 AATCAGTGCTGGAAGACGTGAACGAGAAGGAATGCCTCATGCTCAAGCAGCTCTGGAGCTCCTCCAAAGGCCTT 1476
|.|||||||||||.||.||||||||||||||.|||.|||||||.|||||||||||||||||||||||.|||||.
Sbjct 965 AGTCAGTGCTGGAGGAGGTGAACGAGAAGGAGTGCGTCATGCTGAAGCAGCTCTGGAGCTCCTCCAAGGGCCTG 1038
Query 1477 GACTCCCTTTTCAGCTACCTGCAGGACAAAATTTATGAAGTC 1518
||||||||.||||||||.||||||||||||||.|||||||||
Sbjct 1039 GACTCCCTGTTCAGCTATCTGCAGGACAAAATCTATGAAGTC 1080