Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_04821
Subject:
XR_001736967.2
Aligned Length:
2174
Identities:
710
Gaps:
1463

Alignment

Query    1  -----------------------------------------ATGGCGGCTGCGTCGGGGTCGGTTCTGCAGCGC  33
                                                     |||||||||||||||||||||||||||||||||
Sbjct    1  AACGCAGGGGCGGAACCGCATGACTGGCAGTGGCATCAGCGATGGCGGCTGCGTCGGGGTCGGTTCTGCAGCGC  74

Query   34  TGTATCGTGTCGCCGGCAGGGAGGCATAGCGCCTCTCTGATCTTCCTGCATGGCTCAGGTGATTCTGGACAAGG  107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGTATCGTGTCGCCGGCAGGGAGGCATAGCGCCTCTCTGATCTTCCTGCATGGCTCAGGTGATTCTGGACAAGG  148

Query  108  ATTAAGAATGTGGATCAAGCAGGTTTTAAATCAAGATTTAACATTCCAACACATAAAAATTATTTATCCAACAG  181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATTAAGAATGTGGATCAAGCAGGTTTTAAATCAAGATTTAACATTCCAACACATAAAAATTATTTATCCAACAG  222

Query  182  CTCCTCCCAGATCATATACTCCTATGAAAGGAGGAATCTCCAATGTATGGTTTGACAGATTTAAAATAACCAAT  255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTCCTCCCAGATCATATACTCCTATGAAAGGAGGAATCTCCAATGTATGGTTTGACAGATTTAAAATAACCAAT  296

Query  256  GACTGCCCAGAACACCTTGAATCAATTGATGTCATGTGTCAAGTGCTTACTGATTTGATTGATGAAGAAGTAAA  329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GACTGCCCAGAACACCTTGAATCAATTGATGTCATGTGTCAAGTGCTTACTGATTTGATTGATGAAGAAGTAAA  370

Query  330  AAGTGGCATCAAGAAGAACAGGATATTAATAGGAGGATTCTCTATGGGAGGATGCATGGCAATGCATTTAGCAT  403
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct  371  AAGTGGCATCAAGAAGAACAGGATATTAATAGGAGGATTCTCTATGGGAGGATGCATGGCAATACATTTAGCAT  444

Query  404  ATAGAAATCATCAAGATGTGGCAGGAGTATTTGCTCTTTCTAGTTTTCTGAATAAAGCATCTGCTGTTTACCAG  477
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ATAGAAATCATCAAGATGTGGCAGGAGTATTTGCTCTTTCTAGTTTTCTGAATAAAGCATCTGCTGTTTACCAG  518

Query  478  GCTCTTCAGAAGAGTAATGGTGTACTTCCTGAATTATTTCAGTGTCATGGTACTGCAGATGAGTTAGTTCTTCA  551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCTCTTCAGAAGAGTAATGGTGTACTTCCTGAATTATTTCAGTGTCATGGTACTGCAGATGAGTTAGTTCTTCA  592

Query  552  TTCTTGGGCAGAAGAGACAAACTCAATGTTAAAATCTCTAGGAGTGACCACGAAGTTTCATAGTTTTCCAAATG  625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTCTTGGGCAGAAGAGACAAACTCAATGTTAAAATCTCTAGGAGTGACCACGAAGTTTCATAGTTTTCCAAATG  666

Query  626  TTTACCATGAGCTAAGCAAAACTGAGTTAGACATATTGAAGTTATGGATTCTTACAAAGCTGCCAGGAGAAATG  699
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TTTACCATGAGCTAAGCAAAACTGAGTTAGACATATTGAAGTTATGGATTCTTACAAAGCTGCCAGGAGAAATG  740

Query  700  GAAAAACAAAAA--------------------------------------------------------------  711
            ||||||||||||                                                              
Sbjct  741  GAAAAACAAAAATGAATGAATCAAGAGTGATTTGTTAATGTCATTAGCTATTGTTAGTGTTAGTGTATTTTTTG  814

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct  815  TGTGGCCCAAGACAATCTTCTTCCAGTGTGGCCCAGGGAAGCCAAAAAATTGGACACACTTGATGTAAACATTT  888

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct  889  CAAGAAAATTCAGACTATATGATCACTCAAGACAGCCGATTCACCAGCCTTCTGAAGGGAAGACTAAGCATATT  962

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct  963  CCTATATTGAAGAAGGAAAGATATCCATGATGGTGATGCCACTAAATAGAAGCATCTTGGATCTTACTATTTGG  1036

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1037  AGTAGAACCACACAAGGAGAAGCCATCCAACCTACATAAGACTATGACCTGCTTTGATTTAAGAAGACAATACC  1110

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1111  ATTTCCAGACATCTCTTTCCTGGGGCTAACTATATTAGTATTCTGCCCTGATGGGAAGGAAGAAACTTCATGGG  1184

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1185  CAGTAAATAGCCAATTTAGAAGCAGGAGAAATATGAGGATAATATTCTATTTACTTAAGGGACACAAAGTAAAT  1258

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1259  AAATGTTTTTGAAACTGAATTGGATTGAAGTGGATCCAGATTTTCACAGGAAAAAAAAGTTTCCTTTTCCCTTA  1332

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1333  GTTCTCCTTACACACCTGGCTTTGCAGGAAAAGAAATTATCATTTGGAAACACACATCTGCCTCAGCCACAGGT  1406

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1407  AGAAAAGGCTTGGACTACATGTTTGGTTTGAAGTTTGAAAATCTCAGTCCTTCCCCAACCATCAAAAATATTTA  1480

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1481  CCTCCCTCCCTTGTCTCACAATCATCTAAGCTGCCTTCTTGAATTGACTCCCACACCTGTTCATCATAGAAGGA  1554

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1555  AAAAAATAAAAGCAAATGCCATATAAAATCTCTCTTCTTCAACAAGGTCTTCTGTTTTGAAATATTGAAACAGT  1628

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1629  TCCTGTTCTATTACCTCACCAGCTGTGGCCTTTTATCTCCTAAAGGGAATAGCTGACGTCTTACCAGTCAAAGT  1702

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1703  CATTGTGCTTACGGACGCCATAAATATCTCCTTTAAATCCTACATGATAAATTTCCCTCTGATTGGTAAAGCAG  1776

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1777  ATACTGTAACATGCAAAGGGGGAGCAGGAGAGTCTTTGATGATGTTAAACTAAGCCCCTGGAGATATCCCAGCT  1850

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1851  CTTCCTCCAGAATTTTACTTTCCAACAACTGGAGTCAACAAATACGGTAGAAAATGTTGTCTGGATTATCTACT  1924

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1925  CCCATTATTTTTTTTTAAACTGGTTTTCAATGATGGGCAACCTAAAATTTACTCACACAGAACACAAAACAGTT  1998

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1999  GAATTTGTTAAAAGTCCAAAATGTGCTTTTGTACTTTTGTAAAATGGGAATGTGCTTCTTGTACAAATCACAAT  2072

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 2073  ATGCTTTCTAGACCACAACCTAAAAAGGAAAGAAAAAAATCCTGTGAATAAAAAAAAAAAACAAGGACTTTCAG  2146

Query  712  ----------------------------  711
                                        
Sbjct 2147  TTTTCTACATGCATTTGAAATGACTTTA  2174

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