Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_04855
• Subject: XM_006712260.3
• Aligned Length: 1319
• Identities: 820
• Gaps: 496

Alignment

Query    1  ATGGTGCCCAGCTCTCCGCGCGCGCTCTTCCTTCTGCTCCTGATCCTCGCCTGCCCCGAGCCGCGGGCTTCCCA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGTGCCCAGCTCTCCGCGCGCGCTCTTCCTTCTGCTCCTGATCCTCGCCTGCCCCGAGCCGCGGGCTTCCCA  74

Query   75  GAACTGTCTCAGCAAACAGCAGCTCCTCTCGGCCATCCGCCAGCTGCAGCAGCTGCTGAAGGGCCAGGAGACAC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GAACTGTCTCAGCAAACAGCAGCTCCTCTCGGCCATCCGCCAGCTGCAGCAGCTGCTGAAGGGCCAGGAGACAC  148

Query  149  GCTTCGCCGAGGGCATCCGCCACATGAAGAGCCGGCTGGCCGCGCTGCAGAACTCTGTGGGCAGGGTGGGCCCA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCTTCGCCGAGGGCATCCGCCACATGAAGAGCCGGCTGGCCGCGCTGCAGAACTCTGTGGGCAGGGTGGGCCCA  222

Query  223  GATGCCCTTCCAGTTTCCTGCCCGGCTCTGAACACCCCCGCAGACGGCAGAAAGTTTGGAAGCAAGTACTTAGT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GATGCCCTTCCAGTTTCCTGCCCGGCTCTGAACACCCCCGCAGACGGCAGAAAGTTTGGAAGCAAGTACTTAGT  296

Query  297  GGATCACGAAGTCCATTTTACCTGCAACCCTGGGTTCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTCCCA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGATCACGAAGTCCATTTTACCTGCAACCCTGGGTTCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTCCCA  370

Query  371  ATGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGGTATCAGTGAATGCTCCAGCCAGCCTTGTCAAAATGGT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGGTATCAGTGAATGCTCCAGCCAGCCTTGTCAAAATGGT  444

Query  445  GGTACATGTGTAGAAGGAGTCAACCAGTACAGATGCATTTGTCCTCCAGGAAGGACTGGGAACCGCTGTCAGCA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGTACATGTGTAGAAGGAGTCAACCAGTACAGATGCATTTGTCCTCCAGGAAGGACTGGGAACCGCTGTCAGCA  518

Query  519  TCAGGCCCAGACT-------------------------------------------------------------  531
            |||||||||||||                                                             
Sbjct  519  TCAGGCCCAGACTGCCGCCCCCGAGGGCAGCGTGGCCGGCGACTCCGCCTTCAGCCGCGCGCCGCGCTGTGCGC  592

Query  532  --------------------------------------------------------------------------  531
                                                                                      
Sbjct  593  AGGTGGAGCGGGCTCAGCACTGCAGCTGCGAGGCCGGATTCCACCTGAGCGGCGCCGCCGGCGACAGCGTCTGC  666

Query  532  ---GACGTGAACGAGTGTGAGCTCTACGGGCAGGAGGGGCGCCCCCGGCTCTGCATGCACGCCTGCGTGAACAC  602
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CAGGACGTGAACGAGTGTGAGCTCTACGGGCAGGAGGGGCGCCCCCGGCTCTGCATGCACGCCTGCGTGAACAC  740

Query  603  CCCGGGCTCTTACCGTTGCACCTGCCCCGGTGGATACCGAACTCTGGCTGACGGGAAGAGCTGTGAGGATGTGG  676
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCCGGGCTCTTACCGTTGCACCTGCCCCGGTGGATACCGAACTCTGGCTGACGGGAAGAGCTGTGAGGATGTGG  814

Query  677  ATGAATGTGTGGGCCTGCAGCCGGTGTGCCCCCAGGGGACCACATGCATCAACACCGGTGGAAGCTTCCAGTGT  750
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATGAATGTGTGGGCCTGCAGCCGGTGTGCCCCCAGGGGACCACATGCATCAACACCGGTGGAAGCTTCCAGTGT  888

Query  751  GTCAGCCCTGAGTGCCCCGAGGGCAGCGGCAATGTGAGCTACGTGAAGACGTCTCCAT--TCCAGTGTGAGCGG  822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||         .
Sbjct  889  GTCAGCCCTGAGTGCCCCGAGGGCAGCGGCAATGTGAGCTACGTGAAGACGTCTCCATTCTCCA---------T  953

Query  823  AACCCCTGCCCCATGGACAGCAGGCCCTGCCGCCATCTGCCCAAGACCATCTCCTTCCATTACCTCTCTCTGCC  896
            |.|.||||      ||                                                          
Sbjct  954  AGCTCCTG------GG----------------------------------------------------------  963

Query  897  TTCCAACCTGAAGACGCCCATCACGCTCTTCCGCATGGCCACAGCCTCTGCCCCCGGCCGAGCTGGGCCCAACA  970
                                                                                      
Sbjct  964  --------------------------------------------------------------------------  963

Query  971  GCCTGCGGTTTGGGATCGTGGGTGGGAACAGCCGCGGCCACTTTGTGATGCAGCGTTCAGACCGGCAGACTGGG  1044
                                                                                      
Sbjct  964  --------------------------------------------------------------------------  963

Query 1045  GATCTGATCCTTGTGCAGAACCTGGAGGGGCCTCAGACGCTGGAGGTGGACGTCGACATGTCGGAATACCTGGA  1118
                                                                                      
Sbjct  964  --------------------------------------------------------------------------  963

Query 1119  CCGCTCCTTCCAGGCCAACCACGTGTCCAAGGTCACCATCTTTGTATCCCCCTATGACTTC  1179
                                                                         
Sbjct  964  -------------------------------------------------------------  963