Construct: ORF ccsbBroadEn_04855

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016257.1_s300c1, BRDN0000398472
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FBLN7 (129804)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 129804 FBLN7 fibulin 7 NM_001128165.1 100% 100%
2 human 129804 FBLN7 fibulin 7 NM_153214.3 89.5% 89.5% 532_669del
3 human 129804 FBLN7 fibulin 7 XM_011510585.2 86.1% 84.5% (many diffs)
4 human 129804 FBLN7 fibulin 7 XM_024452686.1 76.5% 76.5% 0_1ins171;361_498del
5 human 129804 FBLN7 fibulin 7 XM_011510587.2 73.6% 72% (many diffs)
6 human 129804 FBLN7 fibulin 7 XM_017003317.1 66.5% 60.3% (many diffs)
7 human 129804 FBLN7 fibulin 7 XM_006712260.3 62.1% 61.5% (many diffs)
8 human 129804 FBLN7 fibulin 7 XM_017003319.1 61.7% 61.2% 532_669del;946_947insTCCAGTG;951_952ins359
9 human 129804 FBLN7 fibulin 7 XR_001738616.1 59.6% (many diffs)
10 human 129804 FBLN7 fibulin 7 XR_001738615.1 59% (many diffs)
11 human 129804 FBLN7 fibulin 7 XR_001738614.2 58.3% (many diffs)
12 human 129804 FBLN7 fibulin 7 XR_001738613.1 50.7% (many diffs)
13 human 129804 FBLN7 fibulin 7 XR_001738617.1 47.9% (many diffs)
14 human 129804 FBLN7 fibulin 7 XR_001738618.2 25% (many diffs)
15 mouse 70370 Fbln7 fibulin 7 NM_024237.4 77.1% 76.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1248
ORF length:
1179
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGTGCCCAGC TCTCCGCGCG CGCTCTTCCT TCTGCTCCTG ATCCTCGCCT
121GCCCCGAGCC GCGGGCTTCC CAGAACTGTC TCAGCAAACA GCAGCTCCTC TCGGCCATCC
181GCCAGCTGCA GCAGCTGCTG AAGGGCCAGG AGACACGCTT CGCCGAGGGC ATCCGCCACA
241TGAAGAGCCG GCTGGCCGCG CTGCAGAACT CTGTGGGCAG GGTGGGCCCA GATGCCCTTC
301CAGTTTCCTG CCCGGCTCTG AACACCCCCG CAGACGGCAG AAAGTTTGGA AGCAAGTACT
361TAGTGGATCA CGAAGTCCAT TTTACCTGCA ACCCTGGGTT CCGGCTGGTC GGGCCCAGCA
421GCGTGGTGTG TCTTCCCAAT GGCACCTGGA CAGGGGAGCA GCCCCACTGT AGAGGTATCA
481GTGAATGCTC CAGCCAGCCT TGTCAAAATG GTGGTACATG TGTAGAAGGA GTCAACCAGT
541ACAGATGCAT TTGTCCTCCA GGAAGGACTG GGAACCGCTG TCAGCATCAG GCCCAGACTG
601ACGTGAACGA GTGTGAGCTC TACGGGCAGG AGGGGCGCCC CCGGCTCTGC ATGCACGCCT
661GCGTGAACAC CCCGGGCTCT TACCGTTGCA CCTGCCCCGG TGGATACCGA ACTCTGGCTG
721ACGGGAAGAG CTGTGAGGAT GTGGATGAAT GTGTGGGCCT GCAGCCGGTG TGCCCCCAGG
781GGACCACATG CATCAACACC GGTGGAAGCT TCCAGTGTGT CAGCCCTGAG TGCCCCGAGG
841GCAGCGGCAA TGTGAGCTAC GTGAAGACGT CTCCATTCCA GTGTGAGCGG AACCCCTGCC
901CCATGGACAG CAGGCCCTGC CGCCATCTGC CCAAGACCAT CTCCTTCCAT TACCTCTCTC
961TGCCTTCCAA CCTGAAGACG CCCATCACGC TCTTCCGCAT GGCCACAGCC TCTGCCCCCG
1021GCCGAGCTGG GCCCAACAGC CTGCGGTTTG GGATCGTGGG TGGGAACAGC CGCGGCCACT
1081TTGTGATGCA GCGTTCAGAC CGGCAGACTG GGGATCTGAT CCTTGTGCAG AACCTGGAGG
1141GGCCTCAGAC GCTGGAGGTG GACGTCGACA TGTCGGAATA CCTGGACCGC TCCTTCCAGG
1201CCAACCACGT GTCCAAGGTC ACCATCTTTG TATCCCCCTA TGACTTCTTG CCAACTTTCT
1261TGTACAAAGT tggcattata agaaagcatt gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)