Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04855
- Subject:
- XM_017003317.1
- Aligned Length:
- 1329
- Identities:
- 884
- Gaps:
- 426
Alignment
Query 1 ATGGTGCCCAGCTCTCCGCGCGCGCTCTTCCTTCTGCTCCTGATCCTCGCCTGCCCCGAGCCGCGGGCTTCCCA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGTGCCCAGCTCTCCGCGCGCGCTCTTCCTTCTGCTCCTGATCCTCGCCTGCCCCGAGCCGCGGGCTTCCCA 74
Query 75 GAACTGTCTCAGCAAACAGCAGCTCCTCTCGGCCATCCGCCAGCTGCAGCAGCTGCTGAAGGGCCAGGAGACAC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAACTGTCTCAGCAAACAGCAGCTCCTCTCGGCCATCCGCCAGCTGCAGCAGCTGCTGAAGGGCCAGGAGACAC 148
Query 149 GCTTCGCCGAGGGCATCCGCCACATGAAGAGCCGGCTGGCCGCGCTGCAGAACTCTGTGGGCAGGGTGGGCCCA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCTTCGCCGAGGGCATCCGCCACATGAAGAGCCGGCTGGCCGCGCTGCAGAACTCTGTGGGCAGGGTGGGCCCA 222
Query 223 GATGCCCTTCCAGTTTCCTGCCCGGCTCTGAACACCCCCGCAGACGGCAGAAAGTTTGGAAGCAAGTACTTAGT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GATGCCCTTCCAGTTTCCTGCCCGGCTCTGAACACCCCCGCAGACGGCAGAAAGTTTGGAAGCAAGTACTTAGT 296
Query 297 GGATCACGAAGTCCATTTTACCTGCAACCCTGGGTTCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTCCCA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGATCACGAAGTCCATTTTACCTGCAACCCTGGGTTCCGGCTGGTCGGGCCCAGCAGCGTGGTGTGTCTTCCCA 370
Query 371 ATGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGGTATCAGTGAATGCTCCAGCCAGCCTTGTCAAAATGGT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGGCACCTGGACAGGGGAGCAGCCCCACTGTAGAGGTATCAGTGAATGCTCCAGCCAGCCTTGTCAAAATGGT 444
Query 445 GGTACATGTGTAGAAGGAGTCAACCAGTACAGATGCATTTGTCCTCCAGGAAGGACTGGGAACCGCTGTCAGCA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGTACATGTGTAGAAGGAGTCAACCAGTACAGATGCATTTGTCCTCCAGGAAGGACTGGGAACCGCTGTCAGCA 518
Query 519 TCAGGCCCAGACT------------------------------------------------------------- 531
|||||||||||||
Sbjct 519 TCAGGCCCAGACTGCCGCCCCCGAGGGCAGCGTGGCCGGCGACTCCGCCTTCAGCCGCGCGCCGCGCTGTGCGC 592
Query 532 -------------------------------------------------------------------------- 531
Sbjct 593 AGGTGGAGCGGGCTCAGCACTGCAGCTGCGAGGCCGGATTCCACCTGAGCGGCGCCGCCGGCGACAGCGTCTGC 666
Query 532 ---GACGTGAACGAGTGTGAGCTCTACGGGCAGGAGGGGCGCCCCCGGCTCTGCATGCACGCCTGCGTGAACAC 602
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAGGACGTGAACGAGTGTGAGCTCTACGGGCAGGAGGGGCGCCCCCGGCTCTGCATGCACGCCTGCGTGAACAC 740
Query 603 CCCGGGCTCTTACCGTTGCACCTGCCCCGGTGGATACCGAACTCTGGCTGACGGGAAGAGCTGTGAGGATGTGG 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCCGGGCTCTTACCGTTGCACCTGCCCCGGTGGATACCGAACTCTGGCTGACGGGAAGAGCTGTGAGGATGTGG 814
Query 677 ATGAATGTGTGGGCCTGCAGCCGGTGTGCCCCCAGGGGACCACATGCATCAACACCGGTGGAAGCTTCCAGTGT 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATGAATGTGTGGGCCTGCAGCCGGTGTGCCCCCAGGGGACCACATGCATCAACACCGGTGGAAGCTTCCAGTGT 888
Query 751 GTCAGCCCTGAGTGCCCCGAGGGCAGCGGCAATGTGAGCTACGTGAAGACGTCTCCATTCCAGTGTGAGCGGAA 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 889 GTCAGCCCTGAGTGCCCCGAGGGCAGCGGCAATGTGAGCTACGTGAAGACGTCTCCATT----TG---GCGGA- 954
Query 825 CCCCTGCCCCATGGACAGCAGGCCCTGCCGCCATCTGCCCAAGACCATCTCCTTCCATT-----ACCTCTCTCT 893
||| || |||| .|..|.||||.||| ||| ||.|
Sbjct 955 ------------GGA-AG----------------------AAGA-AAAATACTTCTATTTGAGAACC-CTAT-- 989
Query 894 GCCTTCCAACCTGAAGACGCCCATCACGCTCTTCCGCATGGCCACAGCCTCTGCCCCCGGCCGAGCTGGGCCCA 967
|||.| || ||||| |||
Sbjct 990 -----------TGAGG---------------TT--GCATG-------------------------------CCA 1004
Query 968 ACAGCCTGCGGTTTGGGATCGTGGGTGGGAACAGCCGCGGCCACTTTGTGATGCAGCGTTCAGACCGGCAGACT 1041
|| ||..||| ||| ||||||||..|.|.|..
Sbjct 1005 AC---------TTCTGGA-------------------------------GAT-----GTTCAGACAAGAAAAAA 1033
Query 1042 GGGGATCTGA-------TCCTTGTGCAGAACCTGGAGGGGCCTCAGACGCTGGAGGTGGACGTCGACATGTCGG 1108
.|..||.||| |||
Sbjct 1034 AGAAATGTGAAAGAGTTTCC------------------------------------------------------ 1053
Query 1109 AATACCTGGACCGCTCCTTCCAGGCCAACCACGTGTCCAAGGTCACCATCTTTGTATCCCCCTATGACTTC 1179
Sbjct 1054 ----------------------------------------------------------------------- 1053