Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_04908
• Subject: NM_001301822.2
• Aligned Length: 1425
• Identities: 801
• Gaps: 624

Alignment

Query    1  ATGGCGGCGAGCGCGCTGCGAGGCCTGCCAGTGGCTGGCGGAGGCGAGAGTAGCGAGAGCGAGGATGATGGCTG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGAGATTGGGTATCTCGACCGGACGTCTCAGAAATTGAAAAGGCTATTACCCATTGAAGAAAAGAAAGAAAAAT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTAAGAAAGCAATGACCATCGGAGATGTTTCATTGGTCCAGGAGCTCCTAGATTCTGGCATTAGTGTAGATTCC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AACTTTCAGTATGGATGGACTCCCCTTATGTATGCTGCTAGTGTTGCCAATGCAGAGCTGGTTCGGGTCCTTTT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GGACAGAGGTGCTAATGCAAGCTTTGAGAAGGATAAGCAAAGTATTTTGATAACTGCATGTTCTGCTCATGGCT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CAGAGGAACAGATCTTGAAGTGTGTAGAACTACTACTTTCAAGAAATGCTGATCCAAATGTTGCTTGTAGGAGA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CTTATGACCCCAATCATGTATGCTGCTCGAGATGGTCACACCCAGGTTGTTGCTCTCCTTGTTGCTCATGGAGC  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  AGAAGTTAATACCCAGGATGAGAATGGTTACACTGCTTTAACGTGGGCAGCACGTCAGGGTCATAAAAATATAG  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  TTTTGAAGTTGCTTGAACTTGGAGCTAATAAAATGCTACAAACCAAAGATGGAAAGATGCCAAGTGAGATTGCA  666
                                            ||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  --------------------------------ATGCTACAAACCAAAGATGGAAAGATGCCAAGTGAGATTGCA  42

Query  667  AAAAGAAACAAACATCATGAGATCTTCAACTTACTTTCTTTTACTTTAAATCCATTGGAAGGAAAACTTCAACA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   43  AAAAGAAACAAACATCATGAGATCTTCAACTTACTTTCTTTTACTTTAAATCCATTGGAAGGAAAACTTCAACA  116

Query  741  GCTAACTAAAGAAGACACTATTTGTAAAATATTGACAACAGATTCTGATAGAGAAAAAGATCACATTTTTAGTT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  117  GCTAACTAAAGAAGACACTATTTGTAAAATATTGACAACAGATTCTGATAGAGAAAAAGATCACATTTTTAGTT  190

Query  815  CATATACAGCATTTGGAGATCTGGAAGTATTTTTACATGGTCTTGGACTTGAACATATGACAGATTTACTAAAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  191  CATATACAGCATTTGGAGATCTGGAAGTATTTTTACATGGTCTTGGACTTGAACATATGACAGATTTACTAAAG  264

Query  889  GAAAGGGATATAACGTTAAGACATCTTTTGACCATGAGGGAAGATGAATTTACAAAGAATGGAATTACCAGTAA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  265  GAAAGGGATATAACGTTAAGACATCTTTTGACCATGAGGGAAGATGAATTTACAAAGAATGGAATTACCAGTAA  338

Query  963  AGACCAGCAGAAAATTCTGGCTGCTCTTAAAGAACTACAGGTAGAAGAGATACAATTTGGAGAGCTATCTGAAG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  339  AGACCAGCAGAAAATTCTGGCTGCTCTTAAAGAACTACAGGTAGAAGAGATACAATTTGGAGAGCTATCTGAAG  412

Query 1037  AGACAAAGTTGGAAATCAGTGGTGATGAGTTCCTCAACTTTCTTCTCAAATTAAATAAACAGTGTGGCCATTTA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  413  AGACAAAGTTGGAAATCAGTGGTGATGAGTTCCTCAACTTTCTTCTCAAATTAAATAAACAGTGTGGCCATTTA  486

Query 1111  ATAACAGCTGTACAGAATGTTATTACTGAGTTACCTGTAAATTCTCAAAAGATAACACTGGAATGGGCTTCTCC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  487  ATAACAGCTGTACAGAATGTTATTACTGAGTTACCTGTAAATTCTCAAAAGATAACACTGGAATGGGCTTCTCC  560

Query 1185  CCAGAATTTTACTTCAGTTTGTGAAGAATTGGTTAATAATGTTGAAGATTTGAGTGAAAAGGTCTGCAAACTAA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  561  CCAGAATTTTACTTCAGTTTGTGAAGAATTGGTTAATAATGTTGAAGATTTGAGTGAAAAGGTCTGCAAACTAA  634

Query 1259  AAGACCTAATTCAAAAGTTGCAAAATGAACGGGAAAATGATCCAACTCATATACAATTAAGGGAAGAAGTATCT  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  635  AAGACCTAATTCAAAAGTTGCAAAATGAACGGGAAAATGATCCAACTCATATACAATTAAGGGAAGAAGTATCT  708

Query 1333  ACATGGAATAGTAGAATTTTGAAGAGGACAGCTATTACCATATGCGGATTCGGTTTTCTTCTTTTCATTTGCAA  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  709  ACATGGAATAGTAGAATTTTGAAGAGGACAGCTATTACCATATGCGGATTCGGTTTTCTTCTTTTCATTTGCAA  782

Query 1407  GCTAACTTTCCAGAGGAAA  1425
            |||||||||||||||||||
Sbjct  783  GCTAACTTTCCAGAGGAAA  801