Construct: ORF ccsbBroadEn_04908

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008608.1_s300c1, BRDN0000394370
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ASZ1 (136991)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 136991 ASZ1 ankyrin repeat, SAM and bas... NM_130768.3 100% 100%
2 human 136991 ASZ1 ankyrin repeat, SAM and bas... NM_001301821.2 98.1% 98.1% 1159_1160ins27
3 human 136991 ASZ1 ankyrin repeat, SAM and bas... NM_001301822.2 56.2% 56.2% 0_1ins624
4 mouse 74068 Asz1 ankyrin repeat, SAM and bas... NM_023729.3 85.9% 85.2% (many diffs)
5 mouse 74068 Asz1 ankyrin repeat, SAM and bas... XM_006505176.3 59.2% 59.1% (many diffs)
6 mouse 74068 Asz1 ankyrin repeat, SAM and bas... XM_006505178.3 59.2% 59.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1494
ORF length:
1425
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGCGGCGAGC GCGCTGCGAG GCCTGCCAGT GGCTGGCGGA GGCGAGAGTA
121GCGAGAGCGA GGATGATGGC TGGGAGATTG GGTATCTCGA CCGGACGTCT CAGAAATTGA
181AAAGGCTATT ACCCATTGAA GAAAAGAAAG AAAAATTTAA GAAAGCAATG ACCATCGGAG
241ATGTTTCATT GGTCCAGGAG CTCCTAGATT CTGGCATTAG TGTAGATTCC AACTTTCAGT
301ATGGATGGAC TCCCCTTATG TATGCTGCTA GTGTTGCCAA TGCAGAGCTG GTTCGGGTCC
361TTTTGGACAG AGGTGCTAAT GCAAGCTTTG AGAAGGATAA GCAAAGTATT TTGATAACTG
421CATGTTCTGC TCATGGCTCA GAGGAACAGA TCTTGAAGTG TGTAGAACTA CTACTTTCAA
481GAAATGCTGA TCCAAATGTT GCTTGTAGGA GACTTATGAC CCCAATCATG TATGCTGCTC
541GAGATGGTCA CACCCAGGTT GTTGCTCTCC TTGTTGCTCA TGGAGCAGAA GTTAATACCC
601AGGATGAGAA TGGTTACACT GCTTTAACGT GGGCAGCACG TCAGGGTCAT AAAAATATAG
661TTTTGAAGTT GCTTGAACTT GGAGCTAATA AAATGCTACA AACCAAAGAT GGAAAGATGC
721CAAGTGAGAT TGCAAAAAGA AACAAACATC ATGAGATCTT CAACTTACTT TCTTTTACTT
781TAAATCCATT GGAAGGAAAA CTTCAACAGC TAACTAAAGA AGACACTATT TGTAAAATAT
841TGACAACAGA TTCTGATAGA GAAAAAGATC ACATTTTTAG TTCATATACA GCATTTGGAG
901ATCTGGAAGT ATTTTTACAT GGTCTTGGAC TTGAACATAT GACAGATTTA CTAAAGGAAA
961GGGATATAAC GTTAAGACAT CTTTTGACCA TGAGGGAAGA TGAATTTACA AAGAATGGAA
1021TTACCAGTAA AGACCAGCAG AAAATTCTGG CTGCTCTTAA AGAACTACAG GTAGAAGAGA
1081TACAATTTGG AGAGCTATCT GAAGAGACAA AGTTGGAAAT CAGTGGTGAT GAGTTCCTCA
1141ACTTTCTTCT CAAATTAAAT AAACAGTGTG GCCATTTAAT AACAGCTGTA CAGAATGTTA
1201TTACTGAGTT ACCTGTAAAT TCTCAAAAGA TAACACTGGA ATGGGCTTCT CCCCAGAATT
1261TTACTTCAGT TTGTGAAGAA TTGGTTAATA ATGTTGAAGA TTTGAGTGAA AAGGTCTGCA
1321AACTAAAAGA CCTAATTCAA AAGTTGCAAA ATGAACGGGA AAATGATCCA ACTCATATAC
1381AATTAAGGGA AGAAGTATCT ACATGGAATA GTAGAATTTT GAAGAGGACA GCTATTACCA
1441TATGCGGATT CGGTTTTCTT CTTTTCATTT GCAAGCTAAC TTTCCAGAGG AAATTGCCAA
1501CTTTCTTGTA CAAAGTtggc attataagaa agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)