Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05043
Subject:
NM_001286559.2
Aligned Length:
1305
Identities:
759
Gaps:
546

Alignment

Query    1  ATGGCGCAGACAGTGCCGCCCTGCGAGCTGCCCTGCAAAGAGTACGACGTGGCCCGTAACACGGGCGCCTACAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GTCCTCCGGCCTGGCCACCGCCAGCTTCCGCACCTCCAAGTACCTGCTGGAGGAGTGGTTCCAGAACTGCTATG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CTCGCTACCACCAGGCCTTCGCCGACCGCGACCAGTCGGAGCGGCAGCGGCACGAGAGCCAGCAGCTGGCCACA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GAGACCCAGGCGCTGGCGCAGCGCACGCAGCAAGACTCCACGCGCACAGTGGGCGAGCGACTGCAGGACACGCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAGCTGGAAGTCGGAGCTGCAGCGTGAGATGGAGGCGCTGGCTGCGGAGACCAACTTGCTCCTGGCCCAGAAGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AACGGCTGGAGCGCGCCCTGGACGCCACAGAGGTGCCCTTCTCCATCACCACTGACAACCTGCAGTGCCGTGAG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CGCCGCGAGCACCCCAACCTCGTGCGCGACCATGTGGAAACGGAGCTGCTGAAGGAAGCCGAGCTCATCCGGAA  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  CATTCAGGAGCTGCTGAAGAGAACCATCATGCAAGCAGTGAGCCAGATCCGACTGAACCGGGAGCACAAGGAGA  592
                                        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ----------------------------ATGCAAGCAGTGAGCCAGATCCGACTGAACCGGGAGCACAAGGAGA  46

Query  593  CCTGCGAGATGGACTGGTCAGACAAGATGGAGGCCTACAACATCGACGAGACCTGCGGGCGCCACCACAGCCAG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   47  CCTGCGAGATGGACTGGTCAGACAAGATGGAGGCCTACAACATCGACGAGACCTGCGGGCGCCACCACAGCCAG  120

Query  667  AGCACCGAGGTGCAGGCTCATCCGTACTCCACCACCTTCCAAGAGAGCGCCTCCACCCCGGAGACCCGGGCCAA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  AGCACCGAGGTGCAGGCTCATCCGTACTCCACCACCTTCCAAGAGAGCGCCTCCACCCCGGAGACCCGGGCCAA  194

Query  741  GTTCACGCAGGACAATCTGTGCCGTGCCCAGCGCGAGCGCCTGGCCTCGGCCAACCTGCGGGTGCTGGTGGACT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  195  GTTCACGCAGGACAATCTGTGCCGTGCCCAGCGCGAGCGCCTGGCCTCGGCCAACCTGCGGGTGCTGGTGGACT  268

Query  815  GCATCCTTCGCGACACCTCCGAGGACCTGCGGCTCCAGTGCGACGCCGTGAACCTGGCCTTCGGGCGCCGCTGT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  269  GCATCCTTCGCGACACCTCCGAGGACCTGCGGCTCCAGTGCGACGCCGTGAACCTGGCCTTCGGGCGCCGCTGT  342

Query  889  GAGGAGCTGGAGGACGCGCGGTACAAGCTGCATCACCACCTGCACAAGACACTGCGGGAAATCACAGATCAGGA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  343  GAGGAGCTGGAGGACGCGCGGTACAAGCTGCATCACCACCTGCACAAGACACTGCGGGAAATCACAGATCAGGA  416

Query  963  ACACAACGTGGCGGCACTGAAGCAGGCCATCAAGGACAAAGAGGCACCTCTGCACGTAGCCCAGACCCGGCTGT  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  417  ACACAACGTGGCGGCACTGAAGCAGGCCATCAAGGACAAAGAGGCACCTCTGCACGTAGCCCAGACCCGGCTGT  490

Query 1037  ACCTGCGCTCGCACCGGCCCAACATGGAGCTGTGCCGTGACGCAGCCCAGTTCAGGCTGTTGAGTGAGGTGGAG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  491  ACCTGCGCTCGCACCGGCCCAACATGGAGCTGTGCCGTGACGCAGCCCAGTTCAGGCTGTTGAGTGAGGTGGAG  564

Query 1111  GAGCTGAACATGTCCCTCACAGCACTGCGAGAGAAGCTTCTAGAAGCGGAGCAGTCCCTGCGCAACCTCGAGGA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  565  GAGCTGAACATGTCCCTCACAGCACTGCGAGAGAAGCTTCTAGAAGCGGAGCAGTCCCTGCGCAACCTCGAGGA  638

Query 1185  CATCCACATGAGCCTGGAGAAGGACATTGCCGCCATGACCAACAGTCTCTTCATCGACCGCCAGAAGTGCATGG  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  639  CATCCACATGAGCCTGGAGAAGGACATTGCCGCCATGACCAACAGTCTCTTCATCGACCGCCAGAAGTGCATGG  712

Query 1259  CCCATCGTACTCGCTACCCCACCATCCTGCAGCTGGCTGGCTACCAG  1305
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  713  CCCATCGTACTCGCTACCCCACCATCCTGCAGCTGGCTGGCTACCAG  759