Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05043
- Subject:
- NR_038327.2
- Aligned Length:
- 2216
- Identities:
- 638
- Gaps:
- 1510
Alignment
Query 1 ATGGCGCAGACAGTGCCGCCCTGCGAGCTGCCCTGCAAAGAGTACGACGTGGCCCGTAACACGGGCGCCTACAC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTCCTCCGGCCTGGCCACCGCCAGCTTCCGCACCTCCAAGTACCTGCTGGAGGAGTGGTTCCAGAACTGCTATG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CTCGCTACCACCAGGCCTTCGCCGACCGCGACCAGTCGGAGCGGCAGCGGCACGAGAGCCAGCAGCTGGCCACA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAGACCCAGGCGCTGGCGCAGCGCACGCAGCAAGACTCCACGCGCACAGTGGGCGAGCGACTGCAGGACACGCA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAGCTGGAAGTCGGAGCTGCAGCGTGAGATGGAGGCGCTGGCTGCGGAGACCAACTTGCTCCTGGCCCAGAAGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AACGGCTGGAGCGCGCCCTGGACGCCACAGAGGTGCCCTTCTCCATCACCACTGACAACCTGCAGTGCCGTGAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CGCCGCGAGCACCCCAACCTCGTGCGCGACCATGTGGAAACGGAGCTGCTGAAGGAAGCCGAGC----TCATCC 514
| ||.|||
Sbjct 1 ---------------------------------------------------------------CATTTTCCTCC 11
Query 515 GGAACATTCAGGAGCTGCTGAAGAGAACCATCATGCAAGCAGTGAGCCAGATCCGAC-----TGAACCGGGAGC 583
|||| |.||.| ||| |||| ||.| ||.|.|.|
Sbjct 12 GGAA-------GTGCGG------------ATC--------------CCAG---CGGCGGTCGTGTAGCTG---- 45
Query 584 ACAAGGAGACCTGCGAGATGGAC-TGGT---------CAGACAAGATGGAGGCCTA------CAACATCGACGA 641
||.||.|||| ||.| |||| | ||.|| ||| || |.
Sbjct 46 ---AGCAGGCCTG------GGGCTTGGTTCTATGTCCC--------TGTAG--CTATGTTTCCA--------GT 92
Query 642 GACCTGCGGGCGCCACCACAGCCAGAGCACCGAGGTGCAGGCTCATCCGTA-------CTCCACCACCTTCCAA 708
|.|||..|||.|...||| ||||||.|.|| |..||.| ||.|.||.|
Sbjct 93 GTCCTCTGGGTGTTTCCA-----AGAGCAACAAG----------AAACGAATAAATCTCTGCCCCGC------- 144
Query 709 GAGAGCGCCTCCACCCCGGAGACCCGGGCCAAGTTCACGCAGGACAATCTGTGCCGTGCCCAGCGCGAGCGCCT 782
||||||||||||||.|||||||||.||||||||||.||||||||||||||||..|||||||||||||||||
Sbjct 145 ---AGCGCCTCCACCCCAGAGACCCGGACCAAGTTCACACAGGACAATCTGTGCCACGCCCAGCGCGAGCGCCT 215
Query 783 GGCCTCGGCCAACCTGCGGGTGCTGGTGGACTGCATCCTTCGCGACACCTCCGAGGACCTGCGGCTCCAGTGCG 856
||.|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|.||||||||.|
Sbjct 216 GGACTCGGCCAACCTGTGGGTGCTGGTGGACTGCATCCTTCGCGACACCTCCGAGGACCTGGGACTCCAGTGTG 289
Query 857 ACGCCGTGAACCTGGCCTTCGGGCGCCGCTGTGAGGAGCTGGAGGACGCGCGGTACAAGCTGCATCACCACCTG 930
|||||||||||||||||||||||||||||||||||||.|||||||||||||||.||||||||||.|||||||||
Sbjct 290 ACGCCGTGAACCTGGCCTTCGGGCGCCGCTGTGAGGAACTGGAGGACGCGCGGCACAAGCTGCAGCACCACCTG 363
Query 931 CACAAGACACTGCGGGAAATCACAGATCAGGAACACAACGTGGCGGCACTGAAGCAGGCCATCAAGGACAAAGA 1004
|||||||..||||||||||||||||||||||||||||||||||.||||||||||.||||||||||||||||.||
Sbjct 364 CACAAGATGCTGCGGGAAATCACAGATCAGGAACACAACGTGGTGGCACTGAAGGAGGCCATCAAGGACAAGGA 437
Query 1005 GGCACCTCTGCACGTAGCCCAGACCCGGCTGTACCTGCGCTCGCACCGGCCCAACATGGAGCTGTGCCGTGACG 1078
||.||||||||||.|||||||||||||||||||..|||.|||.|||||||||||||||.||||||||||.||.|
Sbjct 438 GGAACCTCTGCACATAGCCCAGACCCGGCTGTAGTTGCTCTCACACCGGCCCAACATGCAGCTGTGCCGCGATG 511
Query 1079 CAGCCCAGTTCAG------------------------------------------------------------- 1091
|||||||||||||
Sbjct 512 CAGCCCAGTTCAGGTACTGCCTGGGCCTCTGAGGCAGTCCCAGGTGCCCCCATCCACCTCCTCGCTGCGACCCT 585
Query 1092 -------------------------------------------------------------------------- 1091
Sbjct 586 CTCCAATAAACACTCCAATCTCCACACACACATCCCCCACAGGTGCTGAGAGGGGAGGGAGACTCTGCGGCCAC 659
Query 1092 -------------------------------------------------------------------------- 1091
Sbjct 660 ACACAACATGCAAGCACGCCTTAAACACACAGATATAGACATGACACTGGGCAGGTCATGGGTCGGGGGCCTCC 733
Query 1092 -------------------------------------------------------------------------- 1091
Sbjct 734 CCGTGCCAGGGACCTGTGCCCACGTGGTCTCACCCCACCCTGTGCTACCTCATCTTCCCGGGAGGAAGCTCCTT 807
Query 1092 -------------------------------------------------------------------------- 1091
Sbjct 808 CAGACAAGGTGAGCTCCTGGAGGCCACGGGGCCAGAGAGGCCAGAGAGGGCCATTCCCTGCTGCCCTGAGGGTG 881
Query 1092 -------------------------------------------------------------------------- 1091
Sbjct 882 CTGTCCCCACCTCTGGTGGAAAGTATGACCTACGCCTGGGCTACAGGCATAGATGGGCCGTCCTTTTGTTTCCC 955
Query 1092 -------------------------------------------------------------------------- 1091
Sbjct 956 TTGTTAACGGATGCCTGGTGGCCCCTTCTGAGCCTAAGTACCTTTCTTCCTTCCCTGCCCCTCAGTTCCTTCAA 1029
Query 1092 -------------------------------------------------------------------------- 1091
Sbjct 1030 GGAACTGGGTGCCTCCTTCCGTCAAATATCAGGAATGGAAAGAACTGAGCCTGGTCGGCTGAGGCCAGTCCTGT 1103
Query 1092 -------------------------------------------------------------------------- 1091
Sbjct 1104 CCTGTCAGGGTCGAGATTGCACGCGGGTCACTCATTCCCACTCAGGCCCGCGCTCCCTGGGAGGACCCTCGTAA 1177
Query 1092 -------------------------------------------------------------------------- 1091
Sbjct 1178 TTTATGCTCTGCCCTAGAGCCGCTTTCCTGGTAGGATCCTTTCATGGCGTCTTCCCAGGACCTCCTGCCAGCTC 1251
Query 1092 -------------------------------------------------------------------------- 1091
Sbjct 1252 CCATTGGGAGTTTTGGGTCCCCTCCACCCCAGTAGGTGCATACTTCTGCCCTCCCCAGCCCCAGCTCACACCCC 1325
Query 1092 -------------GCTGTTGAGTGAGGTGGAGGAGCTGAACATGTCCCTCACAGCACTGCGAGAGAAGCTTCTA 1152
||||.||||||||||||||||||||.|||.||||.|||||||.|||||.||||||||||||
Sbjct 1326 CCAACACCCCCAAGCTGGTGAGTGAGGTGGAGGAGCTGTACAAGTCCATCACAGCGCTGCGGGAGAAGCTTCTA 1399
Query 1153 GAAGCGGAGCAGTCCCTGCGCAACCTCGAGGACATCCACATGAGCCTGGAGAAGGACATTGCCGCCATGACCAA 1226
.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|..|.|||||||||||
Sbjct 1400 CAAGCGGAGCAGTCCCTGCGCAACCTCAAGGACATCCACATGAGCCTGGAGAAGGACGTCACTGCCATGACCAA 1473
Query 1227 CAGTCTCTTCATCGACCGCCAGAAGTGCATGGCCCATCGTACTCGCTACCCCACCATCCTGCAGCTGGCTGGCT 1300
|||||||||||||||||||||||||||||||||||||||||||.|||||||||||||.||||||||||||||||
Sbjct 1474 CAGTCTCTTCATCGACCGCCAGAAGTGCATGGCCCATCGTACTTGCTACCCCACCATTCTGCAGCTGGCTGGCT 1547
Query 1301 ACCAG----------------------------------------------------------------- 1305
|||||
Sbjct 1548 ACCAGTGAGCAGCGGCACGGTGCTTCCCCCCAATCCCCCAAATAAACAGTGCGTTAGCTTTCTGCAAAAA 1617
