Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_05088
• Subject: XM_017011774.2
• Aligned Length: 1497
• Identities: 895
• Gaps: 576

Alignment

Query    1  ATGCTGCAGTGTAGACCCGCACAGGAGTTCAGCTTCGGGCCCCGGGCCTTGAAGGACGCTCTGGTCTCCACTGA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTGCAGTGTAGACCCGCACAGGAGTTCAGCTTCGGGCCCCGGGCCTTGAAGGACGCTCTGGTCTCCACTGA  74

Query   75  CGCAGCCCTGCAGCAGCTGTATGTGTCCGCCTTCTCCCCTGCCGAGCGGCTCTTCCTGGCCGAGGCCTACAACC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGCAGCCCTGCAGCAGCTGTATGTGTCCGCCTTCTCCCCTGCCGAGCGGCTCTTCCTGGCCGAGGCCTACAACC  148

Query  149  CGCAGAGGACGCTCTTCTGCACCCTGCTCATCCGCACGGGCTTCGACTGGCTCCTGAGCCGACCCGAGGCTCCC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CGCAGAGGACGCTCTTCTGCACCCTGCTCATCCGCACGGGCTTCGACTGGCTCCTGAGCCGACCCGAGGCTCCC  222

Query  223  GAGGACTTCCAGACCTTCCACGCCTCCCTGCAGCACCGGAAGCCCCGCCTGGCTCGGAAGCACATCTACCTACA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAGGACTTCCAGACCTTCCACGCCTCCCTGCAGCACCGGAAGCCCCGCCTGGCTCGGAAGCACATCTACCTACA  296

Query  297  GCCGATAGACCTGAGCGAGGAGCCGGTGGGAAGCTCCCTGCTGCACCAGCTGTGCAGCTGCACAGAGGCCTTCT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCGATAGACCTGAGCGAGGAGCCGGTGGGAAGCTCCCTGCTGCACCAGCTGTGCAGCTGCACAGAGGCCTTCT  370

Query  371  TCCTGGGCCTGCGCGTCAAGTGCCTGCCGTCGGTGGCAGCCGCGTCCATCCGCTGCTCCTCGCGGCCCAGCCGG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCCTGGGCCTGCGCGTCAAGTGCCTGCCGTCGGTGGCAGCCGCGTCCATCCGCTGCTCCTCGCGGCCCAGCCGG  444

Query  445  GACTCTGACAGGCTCCAGCTCCACACAGACGGCATCCTGTCCTTCTTGAAGAACAACAAGCCAGGGGACGCGCT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GACTCTGACAGGCTCCAGCTCCACACAGACGGCATCCTGTCCTTCTTGAAGAACAACAAGCCAGGGGACGCGCT  518

Query  519  GTGTGTGCTGGGCCTCACACTGTCTGACCTGTACCCCCATGAGGCCTGGAGCTTCACCTTCAGCAAGTTCCTTC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GTGTGTGCTGGGCCTCACACTGTCTGACCTGTACCCCCATGAGGCCTGGAGCTTCACCTTCAGCAAGTTCCTTC  592

Query  593  CAGGGCACGAAGTGGGCGTCTGCAGCTTCGCCCGGTTCTCAGGGGAATTCCCGAAGTCGGGGCCCAGCGCCCCT  666
            ||||||||                                                                  
Sbjct  593  CAGGGCAC------------------------------------------------------------------  600

Query  667  GATCTGGCCCTGGTAGAGGCAGCAGCAGACGGCCCCGAGGCCCCCCTGCAGGACAGGGGCTGGGCCCTGTGCTT  740
                                                                                      
Sbjct  601  --------------------------------------------------------------------------  600

Query  741  CAGTGCCCTGGGGATGGTTCAGTGCTGCAAGGTCACGTGCCACGAGCTCTGCCACCTTCTGGGCCTGGGGAACT  814
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  601  ------------------------------GGTCACGTGCCACGAGCTCTGCCACCTTCTGGGCCTGGGGAACT  644

Query  815  GCCGCTGGCTCCGCTGCCTCATGCAGGGTGCGCTCAGCCTGGACGAGGCCCTGCGGCGGCCCCTGGACCTCTGT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  645  GCCGCTGGCTCCGCTGCCTCATGCAGGGTGCGCTCAGCCTGGACGAGGCCCTGCGGCGGCCCCTGGACCTCTGT  718

Query  889  CCCATCTGCCTGAGGAAGCTGCAGCATGTCCTGGGTTTCAGGCTCATCGAGAGGTACCAGAGACTCTACACCTG  962
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               
Sbjct  719  CCCATCTGCCTGAGGAAGCTGCAGCATGTCCTGGGTTTCAGGCTCATCGAGAGGTACCA---------------  777

Query  963  GACTCAGGCGGTGGTGGGGACGTGGCCCAGCCAGGAGGCGGGGGAGCCGTCAGTGTGGGAGGACACCCCGCCTG  1036
                     |||                      |||..|||.||.||  ||||     ||       |..|.|
Sbjct  778  ---------GGT----------------------GAGCTGGGTGAACC--CAGT-----AG-------CTTCAG  806

Query 1037  CCAGCGCCGACTCGGGCATGTGCTGTGAGAGTGACTCGGAGCCCGGCACCAGTGTGTC-GGAGCCCCTCACCCC  1109
            |||             ||   ||||.|| |.|||          .|||.||     || |.||.|||||     
Sbjct  807  CCA-------------CA---GCTGGGA-ACTGA----------AGCAGCA-----TCTGAAGTCCCTC-----  843

Query 1110  TGATGCCGGGAGTCACACCTTCGCCTCAGGGCCAGAGGAAGGGCTGAGCTACCTGGCAGCCTCAGAGGCTCCGC  1183
                        |||    |||.||                               ||||.|.||         
Sbjct  844  ------------TCA----TTCTCC-------------------------------CAGCGTGAG---------  861

Query 1184  TGCCACCTGGGGGCCCTGCGGAGGCCATCAAGGAGCATGA--ACGGTGGCTGGCCATGTGCATCCAGGCCCTGC  1255
                          ||.|||||  ||.|.||||     ||  ||.|.|.|||.|||                 |
Sbjct  862  --------------CCGGCGGA--CCCTGAAGG-----GAACACTGAGACTGACCA-----------------C  897

Query 1256  AGCGGGAAGTGGCAGAGGAGGACCTGGTGCAGGTGGACAGAGCCGTGGACGCCCTCGACCGCTGGGAGATGTTC  1329
            |||.|||                ||  |||           ||||       |||||.||.||           
Sbjct  898  AGCTGGA----------------CT--TGC-----------GCCG-------CCTCGTCCTCT-----------  924

Query 1330  ACGGGCCAGCTCCCGGCCACCAGGCAGGACCCACCCAGCAGCAGGGACAGCGTGGGGCTGCGCAAGGTGCTGGG  1403
                                                                                      
Sbjct  925  --------------------------------------------------------------------------  924

Query 1404  GGACAAGTTCTCCTCCCTGAGGAGGAAGCTGAGTGCCCGAAAACTCGCCAGAGCAGAGTCGGCCCCCCGTCCCT  1477
                                                                                      
Sbjct  925  --------------------------------------------------------------------------  924

Query 1478  GGGATGGGGAAGAGAGT  1494
                             
Sbjct  925  -----------------  924