Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_05129
• Subject: NM_173065.3
• Aligned Length: 1560
• Identities: 732
• Gaps: 828

Alignment

Query    1  ATGGCGGGGCCCGAGCGCTGGGGCCCCCTGCTCCTGTGCCTGCTGCAGGCCGCTCCAGGGAGGCCCCGTCTGGC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGGGGCCCGAGCGCTGGGGCCCCCTGCTCCTGTGCCTGCTGCAGGCCGCTCCAGGGAGGCCCCGTCTGGC  74

Query   75  CCCTCCCCAGAATGTGACGCTGCTCTCCCAGAACTTCAGCGTGTACCTGACATGGCTCCCAGGGCTTGGCAACC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCCTCCCCAGAATGTGACGCTGCTCTCCCAGAACTTCAGCGTGTACCTGACATGGCTCCCAGGGCTTGGCAACC  148

Query  149  CCCAGGATGTGACCTATTTTGTGGCCTATCAGAGCTCTCCCACCCGTAGACGGTGGCGCGAAGTGGAAGAGTGT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCCAGGATGTGACCTATTTTGTGGCCTATCAGAGCTCTCCCACCCGTAGACGGTGGCGCGAAGTGGAAGAGTGT  222

Query  223  GCGGGAACCAAGGAGCTGCTATGTTCTATGATGTGCCTGAAGAAACAGGACCTGTACAACAAGTTCAAGGGACG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCGGGAACCAAGGAGCTGCTATGTTCTATGATGTGCCTGAAGAAACAGGACCTGTACAACAAGTTCAAGGGACG  296

Query  297  CGTGCGGACGGTTTCTCCCAGCTCCAAGTCCCCCTGGGTGGAGTCCGAATACCTGGATTACCTTTTTGAAGTGG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CGTGCGGACGGTTTCTCCCAGCTCCAAGTCCCCCTGGGTGGAGTCCGAATACCTGGATTACCTTTTTGAAGTGG  370

Query  371  AGCCGGCCCCACCTGTCCTGGTGCTCACCCAGACGGAGGAGATCCTGAGTGCCAATGCCACGTACCAGCTGCCC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGCCGGCCCCACCTGTCCTGGTGCTCACCCAGACGGAGGAGATCCTGAGTGCCAATGCCACGTACCAGCTGCCC  444

Query  445  CCCTGCATGCCCCCACTGGATCTGAAGTATGAGGTGGCATTCTGGAAGGAGGGGGCCGGAAACAAGACCCTATT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCCTGCATGCCCCCACTGGATCTGAAGTATGAGGTGGCATTCTGGAAGGAGGGGGCCGGAAACAAGACCCTATT  518

Query  519  TCCAGTCACTCCCCATGGCCAGCCAGTCCAGATCACTCTCCAGCCAGCTGCCAGCGAACACCACTGCCTCAGTG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TCCAGTCACTCCCCATGGCCAGCCAGTCCAGATCACTCTCCAGCCAGCTGCCAGCGAACACCACTGCCTCAGTG  592

Query  593  CCAGAACCATCTACACGTTCAGTGTCCCGAAATACAGCAAGTTCTCTAAGCCCACCTGCTTCTTGCTGGAGGTC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCAGAACCATCTACACGTTCAGTGTCCCGAAATACAGCAAGTTCTCTAAGCCCACCTGCTTCTTGCTGGAGGTC  666

Query  667  CCAGAAGCCAACTGGGCTTTCCTGGTGCTGCCATCGCTTCTGATACTGCTGTTAGTAATTGCCGCAGGGGGTGT  740
            |||                                                                       
Sbjct  667  CCA-----------------------------------------------------------------------  669

Query  741  GATCTGGAAGACCCTCATGGGGAACCCCTGGTTTCAGCGGGCAAAGATGCCACGGGCCCTGGACTTTTCTGGAC  814
                                                                        ||||||||||||||
Sbjct  670  ------------------------------------------------------------GGACTTTTCTGGAC  683

Query  815  ACACACACCCTGTGGCAACCTTTCAGCCCAGCAGACCAGAGTCCGTGAATGACTTGTTCCTCTGTCCCCAAAAG  888
            |||||||||||||||||||||||||||||||||||||||||||||||||                         
Sbjct  684  ACACACACCCTGTGGCAACCTTTCAGCCCAGCAGACCAGAGTCCGTGAA-------------------------  732

Query  889  GAACTGACCAGAGGGGTCAGGCCGACGCCTCGAGTCAGGGCCCCAGCCACCCAACAGACAAGATGGAAGAAGGA  962
                                                                                      
Sbjct  733  --------------------------------------------------------------------------  732

Query  963  CCTTGCAGAGGACGAAGAGGAGGAGGATGAGGAGGACACAGAAGATGGCGTCAGCTTCCAGCCCTACATTGAAC  1036
                                                                                      
Sbjct  733  --------------------------------------------------------------------------  732

Query 1037  CACCTTCTTTCCTGGGGCAAGAGCACCAGGCTCCAGGGCACTCGGAGGCTGGTGGGGTGGACTCAGGGAGGCCC  1110
                                                                                      
Sbjct  733  --------------------------------------------------------------------------  732

Query 1111  AGGGCTCCTCTGGTCCCAAGCGAAGGCTCCTCTGCTTGGGATTCTTCAGACAGAAGCTGGGCCAGCACTGTGGA  1184
                                                                                      
Sbjct  733  --------------------------------------------------------------------------  732

Query 1185  CTCCTCCTGGGACAGGGCTGGGTCCTCTGGCTATTTGGCTGAGAAGGGGCCAGGCCAAGGGCCGGGTGGGGATG  1258
                                                                                      
Sbjct  733  --------------------------------------------------------------------------  732

Query 1259  GGCACCAAGAATCTCTCCCACCACCTGAATTCTCCAAGGACTCGGGTTTCCTGGAAGAGCTCCCAGAAGATAAC  1332
                                                                                      
Sbjct  733  --------------------------------------------------------------------------  732

Query 1333  CTCTCCTCCTGGGCCACCTGGGGCACCTTACCACCGGAGCCGAATCTGGTCCCTGGGGGACCCCCAGTTTCTCT  1406
                                                                                      
Sbjct  733  --------------------------------------------------------------------------  732

Query 1407  TCAGACACTGACCTTCTGCTGGGAAAGCAGCCCTGAGGAGGAAGAGGAGGCGAGGGAATCAGAAATTGAGGACA  1480
                                                                                      
Sbjct  733  --------------------------------------------------------------------------  732

Query 1481  GCGATGCGGGCAGCTGGGGGGCTGAGAGCACCCAGAGGACCGAGGACAGGGGCCGGACATTGGGGCATTACATG  1554
                                                                                      
Sbjct  733  --------------------------------------------------------------------------  732

Query 1555  GCCAGG  1560
                  
Sbjct  733  ------  732