Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05196
- Subject:
- NR_073164.1
- Aligned Length:
- 3741
- Identities:
- 900
- Gaps:
- 2725
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTTTTCCGCGGGGCGACTTGCCGCGCCGAGGGGCGCGCGTGGCCGAGGGGCTTGGATTCCTTGCCTGGAGGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATTACGTGACACAGCAAGGCTCCGCACATCCTAGTCGCCTGCGGGGGACGCAACGCTGCTCGCTCCGGCTAGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACTGGCGTTGCCTGCCCTCTGCCGGCCTGCGGATGGTTCGGTCCGGCTGGGTCACGCGCTAAGGCTCAGTGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGGCCTGCGGAACGGGCTAGCACTTGCCGAGGGGCAGAACAGTGGCGACAGCCCCAGGACAGTTGCGAGCGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTCCGGCCCAGCATCCGGGAGACGGCGGCAAGCGCCCCAGCTGGACAACCTCAAGTCTTTGAATTCGAATAGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGCTTGCTTACCTGACTCTTCCGGCGGGCCTCGTACATGTTCTGCTCTAGGCGGGATGGTGCAGTTGTGATGT 444
Query 1 ----------------------------------ATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGCTCC 40
|||||.|||||.||.||.||||||||||||||||||||||
Sbjct 445 GCTAAGCATAAGGCCTCGGCCATTCTCCAGCACCATGAACGCCATAGTCGCCCTCTGCCACTTCTGCGAGCTCC 518
Query 41 ACGGCCCCCGCACTCTCTTCTGCACGGAGGTGCTGCACGCCCCACTTCCTCAAGGGGATGGGAATGAGGACAGT 114
|.|||||||||||.||||||||||||||.||.||.|||||.||.||.||.||.||||..||.|.||.|||||||
Sbjct 519 ATGGCCCCCGCACGCTCTTCTGCACGGAAGTTCTACACGCTCCCCTGCCCCAGGGGGCCGGAAGTGGGGACAGT 592
Query 115 CCTGGCCAGGGTGAGCAGGCGGAAGAAGAGGAAGGTGGCATTCAGATGAACAGTCGGATGCGTGCGCACAGCCC 188
||||.|||||.|||||||||.||.||.|||||.||||||||||||||||.|||.|||.|.|||||.||||||||
Sbjct 593 CCTGACCAGGTTGAGCAGGCTGAGGAGGAGGAGGGTGGCATTCAGATGAGCAGCCGGGTCCGTGCCCACAGCCC 666
Query 189 CGCAGAGGGGGCCAGC-GTCGAGTCCAGCAGCCCGGGGCCCAAAAAGTCGGACATGTGCGAGGGCTGCCGGTCA 261
.||.|||||.|||||| || |||||||||||||||||||||||.||||||||||||||.|||||||||||||||
Sbjct 667 AGCCGAGGGTGCCAGCAGT-GAGTCCAGCAGCCCGGGGCCCAAGAAGTCGGACATGTGTGAGGGCTGCCGGTCA 739
Query 262 CTTGCTGCAGGGCACCCGGGATATATCAGCCATGATAAAGAGACCTCCATTAAATACGTCAGCCACCAGCACCC 335
|||||.|.|||||||||.||.||||||||.|||||||||||||||||.|||||.||||||||.|||||||||||
Sbjct 740 CTTGCCGTAGGGCACCCAGGCTATATCAGTCATGATAAAGAGACCTCTATTAAGTACGTCAGTCACCAGCACCC 813
Query 336 CAGCCACCCCCAGCTCTTCAGCATTGTCCGCCAGGCCTGTGTCCGGAGCCTGAGCTGTGAGGTCTGCCCTGGCC 409
||.||||||.||||||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||.|
Sbjct 814 CAACCACCCGCAGCTCTTCAGCATCGTCCGCCAGGCCTGTGTCCGGAGCCTGAGCTGTGAGGTATGCCCTGGTC 887
Query 410 GTGAAGGCCCCATCTTCTTCGGAGATGAGCAGCACGGCTTTGTGTTCAGCCACACCTTCTTCATCAAGGACAGC 483
|||||||||||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 888 GTGAAGGCCCCATCTTCTTTGGTGATGAGCAGCACGGCTTTGTGTTCAGCCACACCTTCTTCATCAAAGACAGC 961
Query 484 CTGGCCAGGGGCTTCCAGCGCTGGTACAGCATCATCACCATCATGATGGACCGGATCTACCTCATCAACTCCTG 557
||||||||.|||||||||||||||||||||||||||.|||||||||||||.|||||||||||||||||||||||
Sbjct 962 CTGGCCAGAGGCTTCCAGCGCTGGTACAGCATCATCGCCATCATGATGGATCGGATCTACCTCATCAACTCCTG 1035
Query 558 GCCCTTCCTGCTGGGGAAGGTCCGGGGAATCATCGATGAGCTCCAGGGCAAGGCGCTCAAGGTGTTTGAGGCAG 631
|||||||||||||||||.|.||||.||.||||||..|||||||||||.||||||..||||||||||||||||||
Sbjct 1036 GCCCTTCCTGCTGGGGAGGATCCGCGGCATCATCAGTGAGCTCCAGGCCAAGGCCTTCAAGGTGTTTGAGGCAG 1109
Query 632 AGCAGTTTGGATGCCCACAGCGTGCTCAGAGGATGAACACAGCCTTCACGCCATTCCTACACCAGAGGAACGGC 705
|||||||||||||.|||||||||||.||||||||||||||.|||||||||||.|||||.|||||||||||||||
Sbjct 1110 AGCAGTTTGGATGTCCACAGCGTGCCCAGAGGATGAACACTGCCTTCACGCCCTTCCTGCACCAGAGGAACGGC 1183
Query 706 AACGCCGCCCGCTCGCTGACATCGCTGACAAGTGATGACAACCTGTGGGCGTGCCTGCACACCTCCTTTGCCTG 779
|||||.||||||||.|||||.||..||||.||||||||||||.||||||||||.||||||||.|||||||||||
Sbjct 1184 AACGCTGCCCGCTCTCTGACCTCCTTGACCAGTGATGACAACTTGTGGGCGTGTCTGCACACTTCCTTTGCCTG 1257
Query 780 GCTCCTGAAGGCGTGTGGCAGCCGGCTGACCGAGAAGCTCCTGGAAGGTGCTCCGACCGAGGATACCTTGGTCC 853
||||||||||||.||.||.|||.|||||||.||.||||||.|.||.||.|||||.||.|||||.|||.||||||
Sbjct 1258 GCTCCTGAAGGCATGCGGTAGCAGGCTGACAGAAAAGCTCTTAGAGGGCGCTCCCACAGAGGACACCCTGGTCC 1331
Query 854 AGATGGAGAAGCTCGCTG---------------------------------GTGAGGCAGGGG----------- 883
|||||||||||||.|||| .||||||.|.||
Sbjct 1332 AGATGGAGAAGCTTGCTGACTTGGAGGAAGAATCAGAAAGTTGGGACAATTCTGAGGCTGAGGAGGAGGAGAAA 1405
Query 884 --TGCTGT------------TGCCG--GGGC-----CTTGGCCCGGATGGCC---------------------- 914
|.|||| |||.| |||| || |.||.|.||.||
Sbjct 1406 GCTCCTGTTACACCAGAGGGTGCTGAAGGGCGAGAGCT--GACCAGTTGCCCAACAGAGTCATCCTTTCTCTCA 1477
Query 915 ----GTGGG-GCGG---------------TACCAGCT----GTC---------------------------TGC 937
||||| ||.| ||||.||| ||| |||
Sbjct 1478 GCCTGTGGGAGCTGGCAGCCCCCAAAGCTTACCGGCTTCAAGTCTCTTCGACACATGAGACAGGTCTTGGGTGC 1551
Query 938 TC--TCC---------------TGGCA-----------GGAATCGCTGAGG-GA--GGGAAACGC--GGCTCTG 978
|| ||| ||||| |||||| ||| || .|||||.|| .|.|.||
Sbjct 1552 TCCATCCTTCCGTATGTTGGCTTGGCATGTCCTCATGGGGAATC----AGGTGATCTGGAAAAGCAGAGATGTG 1621
Query 979 AA----------TCAGC------------CCAG-----AACGAGCCTTC-GGGAAGCT---------------- 1008
|| ||||| ||.| ||| .|||| ||||||.|
Sbjct 1622 AACCTGGTCCATTCAGCGTTTGAAGTCCTCCGGTCTGAAAC---TCTTCTGGGAAGTTATCTGGGCAAGCTCTG 1692
Query 1009 -CACCCTCCGAT-CTCGGTG------------------------------------------------------ 1026
|||...|.||| |||.|||
Sbjct 1693 GCACTGGCTGATGCTCCGTGGCTGTTCTCAAGTTGGGTCGTGGTGTGGGAGCTTCTCATGGCGCGTGCGCTGGC 1766
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1767 CGCCGGAACCCACAAGTGCCTCTCTGTGCAGTGAGGGAAGGGGCAGCGCATGTCAGCAGCATTGATCTGTGACT 1840
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1841 GCCCCCCCAGGACCAGAATTGGGGTCATCTGGGGCTGGGAGACAATGGACACACTGAGGAGGGAGGCTGTGTGA 1914
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1915 GCTGCAGAGGGTGCATTTGTGCTGGATTCTGAGCCGCCGTGTTGTCCACAGACCATGCTGCCTGTGGGCTGTGT 1988
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1989 CCGCATCATCCCTTACAGCAGCCAGTATGAGGAGGCCTATCGCTGCAACTTCCTGGGGCTCAGCCCTCCCGTGC 2062
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2063 CTATCCCTGCCCATGTTCTGGCCTCAGAGTTCGTAGTTGTCGTGGAGGTCCACACGGCCACTCGCTCAAACCTC 2136
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2137 CACCCTGCTGGGTGCGAGGATGACCAGTCCCTCAGCAAGTATGAGTTTGTGGTGACCAGTGGTAGCCCTGTGGC 2210
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2211 TGCAGACAGAGTTGGGCCCACTATCCTGAATAAGATTGAAGCAGCTCTGACCAACCAGAACCTGTCTGTGGATG 2284
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2285 TGGTGGACCAATGTCTCATCTGCCTCAAGGAGGAATGGATGAACAAAGTGAAAGTCCTGTTTAAATTCACCAAG 2358
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2359 GTAGACAGTCGCCCCAAGGAGGACACACAGAAGCTCCTAAGCGTCCTAGGCGCATCAGAGGAGGACAACGTCAA 2432
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2433 ACTGCTGAAGTTCTGGATGACGGGACTGAGCAAAACCTACAAGTCCCATCTCATGTCCACCGTCCGAAGCCCCA 2506
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2507 CAGCTACAGAGTCACGGAGCTGACTCCGAGAACTCCTTCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAA 2580
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2581 ACTGCCCTTGGGTTTCTGACTTCTGGGGTGAGGCCCTGTTTATGGCCTAGGGTTCACCCTCCTTGTAAGACTCT 2654
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2655 ATCAGCCCATGTTGAAATGTAGGGGACACAGAGACAGTGGTCCCTTTGCATCAAACTGCGCTGTCAGGACCTGG 2728
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2729 CGAGATGTGTTCTGTGCCCCGTGAGGACAAAGGCTGGGAACTGAGAGGAGTCCATCAGTCTGCCTCTGAGGTTT 2802
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2803 TGTTGTTGGAGCGTGTCCTCATGGGGTTAGGACAACGCCTTCCCACCATGGAAGACAGCAAGCATCGTGGATCA 2876
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2877 TTTGTCTTTCGGTTGGTGACTTCTCAGGTCACGTGCACAGCCGTGGCCTCTGCACATCTTGCCGGCCTGTGGAT 2950
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2951 ACATCAAAACCATGGCTGTTTTGTTTGCTTTTGTTTTTTTTTAATTTTGGTTTTTGAGTCAGGGTCTTATTCTG 3024
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 3025 TATCCTATCCCAGTTTAGAACTCATGGTGTGGCCTCTGCTACTTCCAGACTTGTAGCAATCCTCCTGCCTCAGC 3098
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 3099 CTCCCAAGTGCTGGGATTACCGAACTGAGCCATCAGAACATTACATTGCTTTCTTCTCTGTTGCTGCCGTAGCG 3172
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 3173 CTAACCAGCCACTGTAGACTATGACGGTGTTACGACAGATCGCCTCTCACCATTGCAGTTTAATAAGGACGTAG 3246
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 3247 CTTGGAAAGATTTCCTGAAAGCTTTCCCAATTTGTTTTTATAATATTCTTGGTGTTTGTTTATATTTAACATGA 3320
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 3321 AGACTGTGTATCTCAGTCTCTGTACAGTTGCAAGAATGTTGAAACACAATAAATCTGTATTTTTGTAAACTGCC 3394
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 3395 GACTACATGTTTTTATGTTAAATACTGTGGTGGTTTGTATGTGCTCTGCCCAGGGAGTGGCACTATTAGGAGGT 3468
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 3469 GCAGCCCTGTTGGAGTAGGTGTGTCACTGTGGGTGTGGCTTTAAGACCCTCCTCTTAGCTGCCTGGAAGTCAGT 3542
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 3543 ATCCTACTAGCAGCCTTCAGATGAAGATGGAGAACTCTTAGCTCCTCCTGCTCCATGCCTGCCTGGAAGCTGCC 3616
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 3617 ATGTTCCCACCTTGATGATAATGGACTGAAACTATAAGACAGCCCCAATTAAATGTTGTCCTTATGAGAATTGC 3690
Query 1027 ----------------------------------------- 1026
Sbjct 3691 CTTGGTCATGGTGTCTGTTCATATCAATAAAACTGCTAACC 3731
