Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05205
- Subject:
- XM_011516912.2
- Aligned Length:
- 2449
- Identities:
- 1478
- Gaps:
- 929
Alignment
Query 1 ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGG 74
Query 75 CTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGA 148
Query 149 GCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCA 222
Query 223 AGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCAT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCAT 296
Query 297 TGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGA 370
Query 371 GGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTT 444
Query 445 GGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGC 518
Query 519 GCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCA 592
Query 593 AGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACG 666
Query 667 CCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTGCCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTGCCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCC 740
Query 741 CAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCA 814
Query 815 ACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGAC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGAC 888
Query 889 AGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGA 962
Query 963 GCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGC 1036
Query 1037 TCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATG 1110
Query 1111 GCGCAGAGGGGCAGTAAACAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAACGG 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GCGCAGAGGGGCAGTAAACAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAACGG 1184
Query 1185 GAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCC 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCC 1258
Query 1259 GGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTGGCC 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTGGCC 1332
Query 1333 TCCATGGTGTCAGAGCAAGGAGAAGCTGTTG------ATAGTATTGAAGCCA---GCCTTGAG-GCTGCGTCCT 1396
||||||||||||||||||||||||||||||| ..||.|...|||||| |||...|| |||||..||.
Sbjct 1333 TCCATGGTGTCAGAGCAAGGAGAAGCTGTTGGGTCCAGCAGCAGCAAAGCCATCTGCCAGCAGAGCTGCAGCCC 1406
Query 1397 C--GCATGCGGAGGCAGCCCGCCAGCT-----CCTGGCTGGAGC----CAGCC---------GGCACCAACTCC 1450
| ||..||.|.||||||||..|.||| ||.|||.|| || ||.|| |||.||.|||||
Sbjct 1407 CGAGCCGGCCGCGGCAGCCCTGCTGCTGGGTGCCGGGCCGG-GCTCCACACCCCTGCGGCCGGGCCCCCACTCC 1479
Query 1451 -------AGAGACACAAGATCAA----------------------GTGCTGCTTC----------------CTA 1479
|||.||.||||..||| ||||||.|.| |||
Sbjct 1480 CGCACCAAGACACGCAAGCCCAACTTCAGCCCCCAGGAGACGGAGGTGCTGGTGCAGAGGGTGCGGCGCCACTA 1553
Query 1480 TCAGCTGGAG-TCACTGCCCTGCTTGTCATCATCATCATCATCGCCACCTCTGTCCGAAAG------------- 1539
.|.||||..| ||...||.||||..|.|| ||| |||.|||||||
Sbjct 1554 CCCGCTGCTGTTCGGGGCGCTGCGGGGCA----------------CAC--CTGCCCGAAAGCACCGCGTGTGGA 1609
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1610 GCCGCATCCTGCAGGCAGTGAACGCGCTGGGCTACTGCCGCCGCGACCTGGGGGACCTCAAGCACAAGTGGCGG 1683
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1684 GACCTGCGAGGTGCTGTGCGCAAGAAGCTGGCGGAGGGCGGCCCCGCCCCCGGCCTCCTCCTCACACCTGTGGA 1757
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1758 GCGCATGGTGGCAGAGACCTTTTCTGCCCACGGTCCCCAAGGCGAGGGCCAGACCACGGAGCCCCTGCCAACTG 1831
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1832 ATGAGGAGGACGAGACCCCCAGCTGCTTGTGGCTGCCCCTGAGGTCCCTGGAAGGGCCCAGCCTGCCTGAACCT 1905
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1906 GACCCCCTGGACTTACGAGGAGTCTTCCACGCACCCACCTCCTCACCCTCCCCACCTGCTTCCCCAGCCTCCAC 1979
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1980 CCCACCAGCAACCACACTCATGGGGGCCTTCCAGCCTTCCCCGCCCTCTTCGGCGCCAGCACCTCCCTTGCCCT 2053
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 2054 CCAGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCCACCGGCAGCAG 2127
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 2128 GGCGCCCTGCTGTCCTCCTGGGCCCAGCAGCAGAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAGCGGCT 2201
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 2202 GGCCGAGCAGAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCTGGTGGAAGCAC 2275
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 2276 GCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCCTGCCAGTGGAGTGGCCCAGGGGCCTGCTGGA 2349
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 2350 GGCTCCCAGGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGAGGA 2423
Query 1540 ------- 1539
Sbjct 2424 GGAGATA 2430
