Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_05284
• Subject: XM_006512698.1
• Aligned Length: 1443
• Identities: 905
• Gaps: 433

Alignment

Query    1  ATGGCGGCCTCCTGGTCGCTCTTGGTTACCCTGCGCCCCTTAGCACAGAGCCCGCTGAGAGGGAGATGTGTTGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GTGCGGGGCCTGGGCCGCCGCTCTCGCTCCTCTGGCCACCGCCCCTGGGAAGCCCTTTTGGAAAGCCTATACGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTCAGACATCCGAGAGCATGACCCCAACTGCCACTTCAGAGACTTATTTGAAAGCTTTGGCCGTTTGCCATGGA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CCTCTGGACCACTATGATTTTCTGATCAAAGCTCATGAGCTAAAGGATGATGAACATCAAAGAAGAGTCATACA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GTGTTTGCAGAAATTACACGAGGACCTTAAAGGATACAATATAGAGGCAGAAGGCCTTTTTTCAAAGCTTTTTT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CAAGGAGCAAACCTCCAAGGGGCCTGTATGTTTATGGAGATGTTGGTACAGGAAAAACAATGGTGATGGACATG  444
                                                                       |||||||||||||||
Sbjct    1  -----------------------------------------------------------ATGGTGATGGACATG  15

Query  445  TTTTATGCTTATGTGGAAATGAAGAGGAAAAAACGGGTTCATTTTCATGGTTTCATGCTAGATGTGCACAAAAG  518
            ||||||||.||||||||||.||||||.||.||.|||||.||||||||.||.||||||||.||.|||||||.|||
Sbjct   16  TTTTATGCATATGTGGAAACGAAGAGAAAGAAGCGGGTCCATTTTCACGGCTTCATGCTGGACGTGCACAGAAG  89

Query  519  AATACATCGCCTTAAACAGAGTTTGCCAAAAAGGAAACCAGGATTCATGGCTAAATCATATGACCCAATAGCTC  592
            .|||||.|.|||||||||||||||||||||||||||..|.||||||||||||||.|||||||||||.|||||||
Sbjct   90  GATACACCACCTTAAACAGAGTTTGCCAAAAAGGAAGGCGGGATTCATGGCTAAGTCATATGACCCGATAGCTC  163

Query  593  CCATAGCCGAAGAAATCAGCGAAGAAGCATGTCTCCTATGTTTTGATGAATTTCAGGTCACTGACATTGCTGAT  666
            ||||||||||.||||||||..|||||.|.|.||||||||||||||||||||||||||||||||||||.||.||.
Sbjct  164  CCATAGCCGAGGAAATCAGTCAAGAAACTTCTCTCCTATGTTTTGATGAATTTCAGGTCACTGACATCGCCGAC  237

Query  667  GCCATGATTCTGAAACAGCTTTTTGAAAATCTGTTCAAAAACGGGGTCGTCGTTGTGGCAACATCCAACAGGCC  740
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  238  GCCATGATTCTGAAACAGCTTTTTGAAAATCTGTTCAAAAACGGGGTCGTCGTTGTGGCAACATCCAACAGACC  311

Query  741  ACCGGAAGATCTCTATAAAAATGGACTCCAAAGAGCTAACTTTGTACCATTCATAGCAGTCTTGAAGGAATATT  814
            ||||||||||||||||||||||||||||||.||.|||||||||||.|||||.|||||.|||.||||||||||||
Sbjct  312  ACCGGAAGATCTCTATAAAAATGGACTCCAGAGGGCTAACTTTGTGCCATTTATAGCTGTCCTGAAGGAATATT  385

Query  815  GTAATACAGTCCAGCTAGATTCTGGGATAGATTACCGGAAAAGGGAACTTCCTGCTGCAGGAAAACTCTACTAC  888
            ||.||||..|||||||.|||||||||.||||||||||||||||||||||..|..||||||||||||||||||||
Sbjct  386  GTGATACGCTCCAGCTGGATTCTGGGGTAGATTACCGGAAAAGGGAACTCGCCCCTGCAGGAAAACTCTACTAC  459

Query  889  CTCACAAGTGAAGCTGATGTGGAGGCTGTCATGGATAAGTTGTTTGATGAGCTGGCTCAGAAACAAAATGATTT  962
            |||||||||||.||||||||||||||.|||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct  460  CTCACAAGTGAGGCTGATGTGGAGGCCGTCGTGGATAAGTTGTTTGATGAGCTGGCTCAGAAACAAAATGATTT  533

Query  963  AACTAGACCAAGGATTCTAAAAGTGCAAGGCAGAGAGCTGCGCCTGAATAAAGCCTGTGGAACCGTTGCCGACT  1036
            ||||||.|||||||||||.|||||||||||||||||||||||.|||||||||||||||||||.|||||||||||
Sbjct  534  AACTAGCCCAAGGATTCTGAAAGTGCAAGGCAGAGAGCTGCGGCTGAATAAAGCCTGTGGAAGCGTTGCCGACT  607

Query 1037  GCACATTTGAAGAGCTGTGTGAGAGACCACTTGGAGCCAGTGACTATTTGGAACTATCAAAGAATTTTGATACA  1110
            |||||||||||||||||||||||||||||||||||||.|||||||||||||||.|||||||||||||||||||.
Sbjct  608  GCACATTTGAAGAGCTGTGTGAGAGACCACTTGGAGCAAGTGACTATTTGGAATTATCAAAGAATTTTGATACG  681

Query 1111  ATATTTTTACGAAACATTCCGCAATTTACTCTGGCAAACAGGACTCAAGGTCGAAGATTCATAACTCTCATCGA  1184
            .||.|..||||||||||||||||.|||.|.||||||||.|||||.||||...||||||||||.||||||||.||
Sbjct  682  GTAATCATACGAAACATTCCGCAGTTTTCACTGGCAAAGAGGACGCAAGCGAGAAGATTCATCACTCTCATTGA  755

Query 1185  TAACTTTTATGATCTCAAGGTGCGTATAATTTGCTCTGCGTCGACTCCTATATCAAGCTTATTTTTGCATCAAC  1258
            ||||||.|||||..||||||||||.||.||.|||||.||.||..||||.||.||||||||.|||.|||||||.|
Sbjct  756  TAACTTCTATGACTTCAAGGTGCGCATTATCTGCTCCGCTTCAGCTCCGATCTCAAGCTTGTTTCTGCATCAGC  829

Query 1259  ATCATGACAGTGAGTTGGAGCAAAGCAGAATACTGATGGATGATTTGGGGCTGAGCCAGGATTCAGCAGAAGGA  1332
            ||||.||||||||||.|||.|||||||||||.|||||||||||||||||||||||||||||.|||||   .||.
Sbjct  830  ATCAGGACAGTGAGTCGGACCAAAGCAGAATCCTGATGGATGATTTGGGGCTGAGCCAGGACTCAGC---CGGG  900

Query 1333  CTCTCCATGTTTACCGGAGAAGAGGAAATCTTTGCATTTCAGCGCACAATTTCCCGACTCACGGAAATGCAGAC  1406
            ||||||||||||||.||.||.|||||||||||.||.|||||||||||.||||||||.|||||.||.||||||||
Sbjct  901  CTCTCCATGTTTACGGGGGAGGAGGAAATCTTCGCCTTTCAGCGCACCATTTCCCGGCTCACAGAGATGCAGAC  974

Query 1407  TGAACAGTACTGGAATGAAGGAGACAGAACCAAGAA-  1442
            .||.||||||||||.||||||.|||||||.||.||| 
Sbjct  975  GGAGCAGTACTGGATTGAAGGGGACAGAAGCAGGAAG  1011