Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05375
- Subject:
- NR_148044.2
- Aligned Length:
- 3123
- Identities:
- 712
- Gaps:
- 2390
Alignment
Query 1 ----------------------------ATGGCCCTGGAGGCGGCGGGAGGGCCGCCGGAGGAAACGCTGTCAC 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTGCGGAAGGGGTGCCCGGGACGAAGCCATGGCCCTGGAGGCGGCGGGAGGGCCGCCGGAGGAAACGCTGTCAC 74
Query 47 TGTGGAAA------------------------------------------------------------------ 54
||||||||
Sbjct 75 TGTGGAAACGGTAATGCTGTCAGGCGACGCGCAGGAGGCGGGGGCCGAGGCCGGGCGGCCCTTCGCGGACCCTC 148
Query 55 -------------------------------------------------------------------------- 54
Sbjct 149 CGAGCTCATAGTCTTCAGGCTGTGGAATCGGAGCTGCCACCGCCCGAGACTCCAAAGCAAAGCCCAGTTTCCGG 222
Query 55 -------------------------------------------------------------------------- 54
Sbjct 223 CGCGGAAGCGGAGGGATCTCAGGAATTGTAGTCCGCGGGGTGGGCGCGGTTCTCGCTTCCGGCCAGTTTGTCTG 296
Query 55 ------------------------------------------------------CGGGAGCAAGCTCGGCTGAA 74
||||||||||||||||||||
Sbjct 297 GCCTGCGCTTGCGCGGGTCTCCGCCGCCTGGGCTCCTAGGGACTGTGGCCTCGGCGGGAGCAAGCTCGGCTGAA 370
Query 75 GGCCCACGTCGTAGACCGGGACACCGAGGCGTGGCAGCGAGACCCCGCCTTCTCGGGTCTGCAGAGGGTCGGGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGCCCACGTCGTAGACCGGGACACCGAGGCGTGGCAGCGAGACCCCGCCTTCTCGGGTCTGCAGAGGGTCGGGG 444
Query 149 GCGTTGACGTGTCCTTCGTGAAAGGGGACAGTGTCCGCGCTTGTGCTTCCCTGGTGGTGCTCAGCTTCCCTGAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCGTTGACGTGTCCTTCGTGAAAGGGGACAGTGTCCGCGCTTGTGCTTCCCTGGTGGTGCTCAGCTTCCCTGAG 518
Query 223 CTCGAGGTCCTTCTTGTGGATGGAAACGGGGTACTCCACCACCGAGGCTTTGGGGTGGCCTGCCACCTTGGCGT 296
|| ||||||||||||||||||||||||||||||||
Sbjct 519 CT----------------------------------------CGAGGCTTTGGGGTGGCCTGCCACCTTGGCGT 552
Query 297 CCTTACAGACCTGCCGTGTGTTGGGGTGGCCAAGAAACTTCTGCAGGTGGATGGGCTGGAGAACAACGCCCTGC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 553 CCTTACAGACCTGCCGTGTGTTGGGGTGGCCAAGAAACTTCTGCAGGTGGATGGGCTGGAGAACAACGCCCTGC 626
Query 371 ACAAGGAGAAGATCCGACTCCTGCAGACTCGAGGAGACTCATTCCCTCTGCTGGGAGACTCTGGGACTGTCCTG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 627 ACAAGGAGAAGATCCGACTCCTGCAGACTCGAGGAGACTCATTCCCTCTGCTGGGAGACTCTGGGACTGTCCTG 700
Query 445 GGAATGGCCCTGAGGAGCCACGACCGCAGCACCAGGCCCCTCTACATCTCCGTGGGCCACAGGATGAGCCTGGA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 701 GGAATGGCCCTGAGGAGCCACGACCGCAGCACCAGGCCCCTCTACATCTCCGTGGGCCACAGGATGAGCCTGGA 774
Query 519 GGCCGCTGTGCGCCTGACTTGCTGCTGCTGCAGGTTCCGGATCCCAGAGCCCGTGCG----------------- 575
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 775 GGCCGCTGTGCGCCTGACTTGCTGCTGCTGCAGGTTCCGGATCCCAGAGCCCGTGCGCCAGGGCCGCGGCTCCT 848
Query 576 -------------------------------------------------------------------------- 575
Sbjct 849 GAGCCTGAAGAACTGGCTGTGACCTGTGTGTCCTGAGTGGGCTTCTGTGGGGGATGGAGGCATTGCCAGCAGCA 922
Query 576 ------------------------------------------------------------CCAGGCTGACATCT 589
||||||||||||||
Sbjct 923 GCTCCTGGTGGGAAACTGGTCTAGAGACCAGCTCAGCACCCAGCAGCACGTCTGTCTCCCCCAGGCTGACATCT 996
Query 590 GCTCCCGAGAGCACATCCGCAAGTCGCTGGGACTCCCCGGGCCACCCACACCGAGGAGCCCGAAGGCGCAGAGG 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 997 GCTCCCGAGAGCACATCCGCAAGTCGCTGGGACTCCCCGGGCCACCCACACCGAGGAGCCCGAAGGCGCAGAGG 1070
Query 664 CCAGTGGCATGCCCCAAAGGAGACTCCGGAGAGTCCTCA-------------------GGTGAGGGCCAGCCCC 718
||||||||||||||||||||||||||||||||||||||| ||||||.|
Sbjct 1071 CCAGTGGCATGCCCCAAAGGAGACTCCGGAGAGTCCTCAGCACTTTGTTGAACGTGGTGGTGAGAG-------- 1136
Query 719 CACAGGACCACAGCCCAGGCCCCA-------------GGACAGCCCCAAGGCC-AGGCTC---CCAG---GAGC 772
||||.|.||.|..|.||..||..| .||.|| |.||.|.|| .|.||| ||.| ||
Sbjct 1137 CACACGTCCTCGTCTCATTCCTGATCGAACGCGGTGGTGAGAG-CACACGTCCTCGTCTCGTTCCTGATCGA-- 1207
Query 773 AGGCGGGCAAGGACTGG-CAG----------------------------------------------------- 792
|.|||| ||| .||
Sbjct 1208 ACGCGG--------TGGTGAGAGCACACATCCTCGTCTCGTTCCTGATCGAACGCGGTGGTGAGAGCACACGTC 1273
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1274 CTCGTCTCGTTCCTGATCGAACGTGGTGGTGAGAGCACACGTCCTTGTCTTGTTCCTGATCTTAAGGGAACGTT 1347
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1348 TGCAGTCTTTCACCACTAGATGTGATGTGAGCTGTTAGATTTTCAAGGATGCTCTTCATCCAGCTGAAGACGGT 1421
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1422 CCCTTCTAGTCCTAATTTGTTAAGTGTTTTTATCCTTAAAGGGTACTGGATTTTGTCAAATGCTTTTCTGGCCT 1495
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1496 CTATTGAAAAGATCCTGTGTTCTTCTGTGAATATGAGGTGTTACATTGATTGATTTTCATATGTTGAGCCAGTT 1569
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1570 TCCATTTGTGGAATACATCTAACTCGGTCATGGTGTATAATCCATTTACTCTGCTGCTGAATGTGATTTGCTTG 1643
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1644 TATTTTGGTGCGGATTTTTACATCTGTATTTATAAGGGATATTGGTCTGGTGTTTTCTTATGATGTCTTCCTTT 1717
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1718 GGTTTTGATATCAGGATAATATTAGCCTCATAGATTGGGTTAGGAAATGTTCTCTCCTCCGTTTTTTTTGGAAG 1791
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1792 AGAGAGATTGGTGTTAATTCTTGCTAGAACCTTTGGTAGAATTTGCCAGTAAGCCTATCTGGTCTTGGGTCTTT 1865
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1866 GGGAGGATTTTGATTCGATTCAATCTATGTATTTGTTATAGATCGTTCGGATTGTCCATCCTTGAGTCAGTTGC 1939
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1940 TAGCTTGTGTGTTTCTTGGAGTTTTTCCGTTTCGTCCATGTTATCTCATCTGTTGGCATACCGTCGTTCACGGG 2013
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2014 ATTTTATTGATGTGTGTGAGGTCTCTGAGAACGTCCCTGCCTTCACTCCTGCTTTTAGTCACTGGCATCTTCTT 2087
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2088 TTAACTTGGGCCATCTGGCCGTGCATGGTTTTGGGAGAGTCCTCCTTGACTCTGCAGATGCTGAGCAGTGATCT 2161
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2162 GGCTGGGAAAGGGGACCAGGAGTGCAGGGCACCTGCTGAGGACTCACCTAAGCCCAAGAGTCAGAGAGTCGGAG 2235
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2236 CTCCAACCACATCTGCCTGCATGCCTTTCCCAGGCTCTCCCCAGGCGGACAGCCAGCACCCCCTCCCCAAAGAC 2309
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2310 CGGGCAGTTCCTGACCAGCACCCCACCAAGTCCTCAGTAAGGCCTGTCTTTGGGGGAGCAGGGTTTCAGGAGGA 2383
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2384 CAGTGGGGGTGGTGTAGAACTCATGGCTGGCGGTTCCGGGCCTCTCAGGAAGCTTTGCCACTGGGCTTGGGGTT 2457
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2458 AAGTGGGTGTGGGGCTCCGAACCCTAAATGGGTGAGAGTTGAAATGAAAGCGGCACCTGTAGTCCGTTTGGGGT 2531
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2532 GCAGGTGTGTGCCAGGGGTCTTCAGCCCCGGCTGATGGCCACATGAACCACATGAGGAGAGGCAGGGCGTGTCA 2605
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2606 GCAGCAAACCTAAGTGTGTGCTCATTTCTGTGGGCCCTTACTCTGTGACACTGCAGCTCTCCAGAGAGACGCTT 2679
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2680 TGAAAACAAAACAGGAAAGAACACACGGCCCCGCGTCTGTTGCCTGAGTCACTGTATTCCTTAAAAGGTGAAGG 2753
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2754 ACCCTGGTCCTTGGCTTTTCGTGCACATGAGAAAATGTTGGCCAAGGTTAGCGATTATGCTTCTGTAATCTGTA 2827
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2828 ACCAGAAGTGCTCTTATGCCCAAACCTTGATGTGATTCTGCTGTAATGTAACTTCGGAGCCAGCTGGATGGATG 2901
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2902 TGACTGTGCAGGTCCTGAGCCCCGGCCCCCGTAACCAAGCAGTGGGCCGAGACACTGAGCCGGGCAGTCAAACA 2975
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2976 GGAGCTCTCTAAGGCTGCTCCCGGGCTGGGACCTGGGTCTAGGATTCTCAGTAAGACCTTTGAATAAAACTAAC 3049
Query 793 --------------- 792
Sbjct 3050 TTGAATTCTTCAAAA 3064
