Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05541
Subject:
NM_001171979.2
Aligned Length:
1539
Identities:
1296
Gaps:
243

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGACTGGAAAGGGCTTAGGTGAGGATACCGAAGACCGATGGGGAGCTGGCGCCTTGGGCCCCTGCGGGCGGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGCCTGAAAGGTGGAGGTTGTGTTTGGGAGGCCGAGGCAGGAGGATCACGAGGTCAAGAGATCGAGACCATCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGGCCAACATGGAAACCTCTCTGAGGTCTGGTCAGATTCCAACCCTGGACAGCAGTGAACACAACCTTTCCCCT  222

Query    1  ---------------------ATGCCCCATTCTCCTCTGATCTCCATTCCTCATGTGTGGTGTCACCCAGAAGA  53
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAGCCACTGGAATTGGACAGAATGCCCCATTCTCCTCTGATCTCCATTCCTCATGTGTGGTGTCACCCAGAAGA  296

Query   54  GGAGGAAAGAATGCATGATGAACTTCTACAAGCAGTATCCAAGGGGCCGGTGATGTTCAGGGATGTTTCCATAG  127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGAGGAAAGAATGCATGATGAACTTCTACAAGCAGTATCCAAGGGGCCGGTGATGTTCAGGGATGTTTCCATAG  370

Query  128  ACTTCTCTCAAGAGGAATGGGAATGCCTGGACGCTGATCAGATGAATTTATACAAAGAAGTGATGTTGGAGAAT  201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACTTCTCTCAAGAGGAATGGGAATGCCTGGACGCTGATCAGATGAATTTATACAAAGAAGTGATGTTGGAGAAT  444

Query  202  TTCAGCAACCTGGTTTCAGTGGGACTTTCCAATTCTAAGCCAGCTGTGATCTCCTTATTGGAACAAGGAAAAGA  275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TTCAGCAACCTGGTTTCAGTGGGACTTTCCAATTCTAAGCCAGCTGTGATCTCCTTATTGGAACAAGGAAAAGA  518

Query  276  GCCCTGGATGGTTGATAGAGAGCTGACTAGAGGCCTGTGTTCAGATCTGGAATCAATGTGTGAGACCAAAATAT  349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCCCTGGATGGTTGATAGAGAGCTGACTAGAGGCCTGTGTTCAGATCTGGAATCAATGTGTGAGACCAAAATAT  592

Query  350  TATCTCTAAAGAAGAGACATTTCAGTCAAGTAATAATTACCCGTGAAGACATGTCTACTTTTATTCAGCCCACA  423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TATCTCTAAAGAAGAGACATTTCAGTCAAGTAATAATTACCCGTGAAGACATGTCTACTTTTATTCAGCCCACA  666

Query  424  TTTCTTATTCCACCTCAAAAAACTATGAGTGAAGAGAAACCATGGGAATGTAAGATATGTGGAAAGACCTTTAA  497
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TTTCTTATTCCACCTCAAAAAACTATGAGTGAAGAGAAACCATGGGAATGTAAGATATGTGGAAAGACCTTTAA  740

Query  498  TCAAAACTCACAATTTATCCAACATCAGAGAATTCATTTTGGTGAAAAACACTATGAATCTAAGGAGTATGGGA  571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TCAAAACTCACAATTTATCCAACATCAGAGAATTCATTTTGGTGAAAAACACTATGAATCTAAGGAGTATGGGA  814

Query  572  AGTCCTTTAGTCGTGGCTCACTCGTTACTCGACATCAGAGGATTCACACTGGTAAAAAACCCTATGAATGTAAG  645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGTCCTTTAGTCGTGGCTCACTCGTTACTCGACATCAGAGGATTCACACTGGTAAAAAACCCTATGAATGTAAG  888

Query  646  GAATGTGGCAAGGCTTTTAGTTGTAGTTCATATTTTTCTCAACATCAGAGGATTCACACTGGTGAGAAACCCTA  719
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GAATGTGGCAAGGCTTTTAGTTGTAGTTCATATTTTTCTCAACATCAGAGGATTCACACTGGTGAGAAACCCTA  962

Query  720  TGAATGTAAGGAATGTGGAAAAGCCTTTAAGTATTGCTCAAACCTTAATGATCATCAGAGAATTCACACTGGTG  793
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGAATGTAAGGAATGTGGAAAAGCCTTTAAGTATTGCTCAAACCTTAATGATCATCAGAGAATTCACACTGGTG  1036

Query  794  AGAAACCCTATGAATGTAAAGTATGTGGAAAAGCCTTTACTAAAAGTTCACAACTTTTTCTACATCTGAGAATT  867
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGAAACCCTATGAATGTAAAGTATGTGGAAAAGCCTTTACTAAAAGTTCACAACTTTTTCTACATCTGAGAATT  1110

Query  868  CATACTGGTGAGAAACCTTATGAATGTAAAGAATGTGGGAAAGCCTTTACTCAACACTCAAGGCTTATTCAGCA  941
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CATACTGGTGAGAAACCTTATGAATGTAAAGAATGTGGGAAAGCCTTTACTCAACACTCAAGGCTTATTCAGCA  1184

Query  942  TCAGAGAATGCATACTGGTGAGAAACCTTATGAATGTAAGCAGTGTGGGAAGGCCTTTAATAGTGCCTCAACAC  1015
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TCAGAGAATGCATACTGGTGAGAAACCTTATGAATGTAAGCAGTGTGGGAAGGCCTTTAATAGTGCCTCAACAC  1258

Query 1016  TTACTAACCATCACAGAATTCATGCTGGTGAGAAGCTCTATGAATGTGAAGAATGTAGAAAGGCCTTTATTCAG  1089
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TTACTAACCATCACAGAATTCATGCTGGTGAGAAGCTCTATGAATGTGAAGAATGTAGAAAGGCCTTTATTCAG  1332

Query 1090  AGCTCAGAACTTATTCAACATCAGAGAATCCATACAGATGAAAAACCATATGAATGTAATGAATGTGGGAAGGC  1163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AGCTCAGAACTTATTCAACATCAGAGAATCCATACAGATGAAAAACCATATGAATGTAATGAATGTGGGAAGGC  1406

Query 1164  CTTTAATAAAGGCTCAAATCTTACTCGACATCAGAGAATTCACACTGGTGAGAAACCCTATGACTGTAAGGAAT  1237
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CTTTAATAAAGGCTCAAATCTTACTCGACATCAGAGAATTCACACTGGTGAGAAACCCTATGACTGTAAGGAAT  1480

Query 1238  GTGGAAAGGCTTTTGGTAGTCGCTCTGACCTCATTCGCCATGAGGGAATTCATACTGGT  1296
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GTGGAAAGGCTTTTGGTAGTCGCTCTGACCTCATTCGCCATGAGGGAATTCATACTGGT  1539

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