Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_05603
• Subject: XM_011243182.2
• Aligned Length: 903
• Identities: 641
• Gaps: 168

Alignment

Query   1  --------------------------------------------------------------------------  0
                                                                                     
Sbjct   1  ATGCATTTAGTTCCCTTATTGGCAAATATCTTAAATGTTCTTCAGAAGATGATGAGGTCATTCAACCAGGGTTC  74

Query   1  AT-GGCCGAAGGCGGGGCTAGCAAAGGTGGTGGAGAAGAGCCCGGGAAGCTGCCGGAGCCGGCAGAGGAGGAAT  73
           || .|||..|||||||||.|||||||||      ||||||||.|..||.|||||.|.||.|||||||||.|||.
Sbjct  75  ATCAGCCCCAGGCGGGGCAAGCAAAGGT------GAAGAGCCAGAAAAACTGCCCGGGCTGGCAGAGGACGAAC  142

Query  74  CCCAGGTTTTGCGCGGAACTGGCCACTGTAAGTGGTTCAATGTGCGCATGGGATTTGGATTCATCTCCATGATA  147
           ||||||||.|||..||.||||||||||||||.||||||||.||||||||||||||.||||||||||||||||||
Sbjct 143  CCCAGGTTCTGCATGGCACTGGCCACTGTAAATGGTTCAACGTGCGCATGGGATTCGGATTCATCTCCATGATA  216

Query 148  AACCGAGAGGGAAGCCCCTTGGATATTCCAGTCGATGTATTTGTACACCAAAGCAAACTATTCATGGAAGGATT  221
           |..||||||||||..|||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 217  AGTCGAGAGGGAAATCCCTTGGATATTCCAGTGGATGTATTTGTACACCAAAGCAAACTATTCATGGAAGGATT  290

Query 222  TAGAAGCCTAAAAGAAGGAGAACCAGTGGAATTCACATTTAAAAAATCTTCCAAAGGCCTTGAGTCAATACGGG  295
           |||||||.|.|||||||||||.|||||||||||.||||||||||||||..||||||||||||||||||||||||
Sbjct 291  TAGAAGCTTGAAAGAAGGAGAGCCAGTGGAATTTACATTTAAAAAATCCCCCAAAGGCCTTGAGTCAATACGGG  364

Query 296  TAACAGGACCTGGTGGGAGCCCCTGTTTAGGAAGTGAAAGAAGACCCAAAGGGAAGACACTACAGAAAAGAAAA  369
           |||||||.||.||||||||||||||.||||||||||||||||||||.|||||||||||.||.||.||.|||||.
Sbjct 365  TAACAGGCCCAGGTGGGAGCCCCTGCTTAGGAAGTGAAAGAAGACCTAAAGGGAAGACCCTGCAAAAGAGAAAG  438

Query 370  CCAAAGGGAGAT--------------------------------------------------------------  381
           ||||||||||||                                                              
Sbjct 439  CCAAAGGGAGATAGGTGGAGACGGCAGGATTTACTGATGGATCAGATGTGGACTGTGCGAGAAGAAGAGTCCAG  512

Query 382  ----------AGATGCTACAACTGTGGTGGCCTTGATCATCATGCTAAGGAATGTAGTCTACCTCCTCAGCCAA  445
                     ||||||||||||||||||||.||.||.|||||||||||.|||||.|||||||||||||||||||
Sbjct 513  GATGATTCCAAGATGCTACAACTGTGGTGGTCTCGACCATCATGCTAAAGAATGCAGTCTACCTCCTCAGCCAA  586

Query 446  AGAAGTGCCATTACTGTCAGAGCATCATGCACATGGTGGCAAACTGCCCACATAAAAATGTTGCACAGCCACCC  519
           ||||||||||||||||||||||||||||||||||||||||.|||||||||||.||...||..||.||||..|||
Sbjct 587  AGAAGTGCCATTACTGTCAGAGCATCATGCACATGGTGGCCAACTGCCCACACAAGCTTGCCGCTCAGCTGCCC  660

Query 520  GCGAGTTCTCAGGGAAGACAGGAAGCAGAATCCCAGCCATGCACTTCAACTCT-----CCCTCGAGAAGTGGGA  588
           ||.||||||||||||||||||||.|||||||||||||||||     ||.||||     .||..|||||||||||
Sbjct 661  GCCAGTTCTCAGGGAAGACAGGAGGCAGAATCCCAGCCATG-----CAGCTCTGCGGCACCAAGAGAAGTGGGA  729

Query 589  GGCGGGCATGGCTGTACA-TCACCACCGTTTCCTCAGGAGGCTAGGGCAGAGATCTCAGAACGGTCAGGCAGGT  661
           ||.|||||||||||.||| |    ||.||||||||||||||..|.|.||||.||..||||.|..||||.|||||
Sbjct 730  GGGGGGCATGGCTGCACAGT----ACTGTTTCCTCAGGAGGTGAAGTCAGAAATGGCAGAGCACTCAGACAGGT  799

Query 662  CACCTCAAGAAGCTTCCTCCACGAAGTCATCTATAGCACCAGAAGAGCAAAGCAAAAAGGGGCCTTCAGTTCAA  735
           ||||.|||||||.|||.||||||||..|.|.|..||||..||.||||||||.||||||||||||||...||||.
Sbjct 800  CACCCCAAGAAGTTTCTTCCACGAAAGCGTTTGCAGCAATAGGAGAGCAAAACAAAAAGGGGCCTTTGATTCAG  873

Query 736  AAAAGGAAAAAGACA  750
           |||.||||||||||.
Sbjct 874  AAACGGAAAAAGACT  888