Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05771
- Subject:
- NR_027674.2
- Aligned Length:
- 4933
- Identities:
- 2101
- Gaps:
- 2830
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGGCGCTGAGGCGGCCGTGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCCAAGCGGCCAGGTTGGCGGCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGCTCCGGGCCGCGCGAGGCCACGGCCACGCCGCGCCGCTGCGCACAACCAACGAGGCAGAGCGCCGCCCGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGAGACTGCGGCCGAAGCGTGGGGCGCGCGTGCGGAGGACCAGGCGCGGCGCGGCTGCGGCTGAGAGTGGAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTTCAGGCTGGCATGGAGAGCTTAAGGGGCAACTGAAGGAGACACACTGGCCAAGCGCGGAGTTCTGCTTACT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAGTCCTGCTGAGATACTCTCTCAGTCCGCTCGCACCGAAGGAAGCTGCCTTGGGATCAGAGCAGACATAAAG 370
Query 1 ---------------------------------------------------------------ATGGATATAGA 11
|||||||||||
Sbjct 371 CTAGAAAAATTTCAAGACAGAAACAGTCTCCGCCAGTCAAGAAACCCTCAAAAGTATTTTGCCATGGATATAGA 444
Query 12 AGATGAAGAAAACATGAGTTCCAGCAGCACTGATGTGAAGGAAAACCGCAATCTGGACAACGTGTCCCCCAAGG 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGATGAAGAAAACATGAGTTCCAGCAGCACTGATGTGAAGGAAAACCGCAATCTGGACAACGTGTCCCCCAAGG 518
Query 86 ATGGCAGCACACCTGGGCCTGGCGAGGGCTCTCAGCTCTCCAATGGGGGTGGTGGTGGCCCCGGCAGAAAGCGG 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATGGCAGCACACCTGGGCCTGGCGAGGGCTCTCAGCTCTCCAATGGGGGTGGTGGTGGCCCCGGCAGAAAGCGG 592
Query 160 CCCCTGGAGGAGGGCAGCAATGGCCACTCCAAGTACCGCCTGAAGAAAAGGAGGAAAACACCAGGGCCCGTCCT 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCCCTGGAGGAGGGCAGCAATGGCCACTCCAAGTACCGCCTGAAGAAAAGGAGGAAAACACCAGGGCCCGTCCT 666
Query 234 CCCCAAGAACGCCCTGATGCAGCTGAATGAGATCAAGCCTGGTTTGCAGTACACACTCCTGTCCCAGACTGGGC 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCCCAAGAACGCCCTGATGCAGCTGAATGAGATCAAGCCTGGTTTGCAGTACACACTCCTGTCCCAGACTGGGC 740
Query 308 CCGTGCACGCGCCTTTGTTTGTCATGTCTGTGGAGGTGAATGGCCAGGTTTTTGAGGGCTCTGGTCCCACAAAG 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCGTGCACGCGCCTTTGTTTGTCATGTCTGTGGAGGTGAATGGCCAGGTTTTTGAGGGCTCTGGTCCCACAAAG 814
Query 382 AAAAAGGCAAAACTCCATGCTGCTGAGAAGGCCTTGAGGTCTTTCGTTCAGTTTCCTAATGCCTCTGAGGCCCA 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAAAAGGCAAAACTCCATGCTGCTGAGAAGGCCTTGAGGTCTTTCGTTCAGTTTCCTAATGCCTCTGAGGCCCA 888
Query 456 CCTGGCCATGGGGAGGACCCTGTCTGTCAACACGGACTTCACATCTGACCAGGCCGACTTCCCTGACACGCTCT 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCTGGCCATGGGGAGGACCCTGTCTGTCAACACGGACTTCACATCTGACCAGGCCGACTTCCCTGACACGCTCT 962
Query 530 TCAATGGTTTTGAAACTCCTGACAAGGCGGAGCCTCCCTTTTACGTGGGCTCCAATGGGGATGACTCCTTCAGT 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCAATGGTTTTGAAACTCCTGACAAGGCGGAGCCTCCCTTTTACGTGGGCTCCAATGGGGATGACTCCTTCAGT 1036
Query 604 TCCAGCGGGGACCTCAGCTTGTCTGCTTCCCCGGTGCCTGCCAGCCTAGCCCAGCCTCCTCTCCCTGCCTTACC 677
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1037 TCCAGCGGGGACCTCAGCTTGTCTGCTTCCCCGGTGCCTGCCAGCCTAGCCCAGCCTCCTCTCCCTGTCTTACC 1110
Query 678 ACCATTCCCACCCCCGAGTGGGAAGAATCCCGTGATGATCTTGAACGAACTGCGCCCAGGACTCAAGTATGACT 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACCATTCCCACCCCCGAGTGGGAAGAATCCCGTGATGATCTTGAACGAACTGCGCCCAGGACTCAAGTATGACT 1184
Query 752 TCCTCTCCGAGAGCGGGGAGAGCCATGCCAAGAGCTTCGTCATGTCTGTGGTCGTGGATGGTCAGTTCTTTGAA 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TCCTCTCCGAGAGCGGGGAGAGCCATGCCAAGAGCTTCGTCATGTCTGTGGTCGTGGATGGTCAGTTCTTTGAA 1258
Query 826 GGCTCGGGGAGAAACAAGAAGCTTGCCAAGGCCCGGGCTGCGCAGTCTGCCCTGGCCGCCATTTTTAACTTGCA 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGCTCGGGGAGAAACAAGAAGCTTGCCAAGGCCCGGGCTGCGCAGTCTGCCCTGGCCGCCATTTTTAACTTGCA 1332
Query 900 CTTGGATCAGACGCCATCTCGCCAGCCTATTCCCAGTGAGGGTCTTCAGCTGCATTTACCGCAGGTTTTAGCTG 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CTTGGATCAGACGCCATCTCGCCAGCCTATTCCCAGTGAGGGTCTTCAGCTGCATTTACCGCAGGTTTTAGCTG 1406
Query 974 ACGCTGTCTCACGCCTGGTCCTGGGTAAGTTTGGTGACCTGACCGACAACTTCTCCTCCCCTCACGCTCGCAGA 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ACGCTGTCTCACGCCTGGTCCTGGGTAAGTTTGGTGACCTGACCGACAACTTCTCCTCCCCTCACGCTCGCAGA 1480
Query 1048 AAAGTGCTGGCTGGAGTCGTCATGACAACAGGCACAGATGTTAAAGATGCCAAGGTGATAAGTGTTTCTACAGG 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAAGTGCTGGCTGGAGTCGTCATGACAACAGGCACAGATGTTAAAGATGCCAAGGTGATAAGTGTTTCTACAGG 1554
Query 1122 AACAAAATGTATTAATGGTGAATACATGAGTGATCGTGGCCTTGCATTAAATGACTGCCATGCAGAAATAATAT 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 AACAAAATGTATTAATGGTGAATACATGAGTGATCGTGGCCTTGCATTAAATGACTGCCATGCAGAAATAATAT 1628
Query 1196 CTCGGAGATCCTTGCTCAGATTTCTTTATACACAACTTGAGCTTTACTTAAATAACAAAGATGATCAAAAAAGA 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CTCGGAGATCCTTGCTCAGATTTCTTTATACACAACTTGAGCTTTACTTAAATAACAAAGATGATCAAAAAAGA 1702
Query 1270 TCCATCTTTCAGAAATCAGAGCGAGGGGGGTTTAGGCTGAAGGAGAATGTCCAGTTTCATCTGTACATCAGCAC 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TCCATCTTTCAGAAATCAGAGCGAGGGGGGTTTAGGCTGAAGGAGAATGTCCAGTTTCATCTGTACATCAGCAC 1776
Query 1344 CTCTCCCTGTGGAGATGCCAGAATCTTCTCACCACATGAGCCAATCCTGGAAGAACCAGCAGATAGACACCCAA 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTCTCCCTGTGGAGATGCCAGAATCTTCTCACCACATGAGCCAATCCTGGAAGAACCAGCAGATAGACACCCAA 1850
Query 1418 ATCGTAAAGCAAGAGGACAGCTACGGACCAAAATAGAGTCTGGTGAGGGGACGATTCCAGTGCGCTCCAATGCG 1491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 ATCGTAAAGCAAGAGGACAGCTACGGACCAAAATAGAGTCTGGTGAGGGGACGATTCCAGTGCGCTCCAATGCG 1924
Query 1492 AGCATCCAAACGTGGGACGGGGTGCTGCAAGGGGAGCGGCTGCTCACCATGTCCTGCAGTGACAAGATTGCACG 1565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AGCATCCAAACGTGGGACGGGGTGCTGCAAGGGGAGCGGCTGCTCACCATGTCCTGCAGTGACAAGATTGCACG 1998
Query 1566 CTGGAACGTGGTGGGCATCCAGGGATCCCTGCTCAGCATTTTCGTGGAGCCCATTTACTTCTCGAGCATCATCC 1639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CTGGAACGTGGTGGGCATCCAGGGATCCCTGCTCAGCATTTTCGTGGAGCCCATTTACTTCTCGAGCATCATCC 2072
Query 1640 TGGGCAGCCTTTACCACGGGGACCACCTTTCCAGGGCCATGTACCAGCGGATCTCCAACATAGAGGACCTGCCA 1713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGGGCAGCCTTTACCACGGGGACCACCTTTCCAGGGCCATGTACCAGCGGATCTCCAACATAGAGGACCTGCCA 2146
Query 1714 CCTCTCTACACCCTCAACAAGCCTTTGCTCAGTGGCATCAGCAATGCAGAAGCACGGCAGCCAGGGAAGGCCCC 1787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CCTCTCTACACCCTCAACAAGCCTTTGCTCAGTGGCATCAGCAATGCAGAAGCACGGCAGCCAGGGAAGGCCCC 2220
Query 1788 CAACTTCAGTGTCAACTGGACGGTAGGCGACTCCGCTATTGAGGTCATCAACGCCACGACTGGGAAGGATGAGC 1861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CAACTTCAGTGTCAACTGGACGGTAGGCGACTCCGCTATTGAGGTCATCAACGCCACGACTGGGAAGGATGAGC 2294
Query 1862 TGGGCCGCGCGTCCCGCCTGTGTAAGCACGCGTTGTACTGTCGCTGGATGCGTGTGCACGGCAAGGTTCCCTCC 1935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TGGGCCGCGCGTCCCGCCTGTGTAAGCACGCGTTGTACTGTCGCTGGATGCGTGTGCACGGCAAGGTTCCCTCC 2368
Query 1936 CACTTACTACGCTCCAAGATTACCAAACCCAACGTGTACCATGAGTCCAAGCTGGCGGCAAAGGAGTACCAGGC 2009
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CACTTACTACGCTCCAAGATTACCAAGCCCAACGTGTACCATGAGTCCAAGCTGGCGGCAAAGGAGTACCAGGC 2442
Query 2010 CGCCAAGGCGCGTCTGTTCACAGCCTTCATCAAGGCGGGGCTGGGGGCCTGGGTGGAGAAGCCCACCGAGCAGG 2083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CGCCAAGGCGCGTCTGTTCACAGCCTTCATCAAGGCGGGGCTGGGGGCCTGGGTGGAGAAGCCCACCGAGCAGG 2516
Query 2084 ACCAGTTCTCACTCACGCCC------------------------------------------------------ 2103
||||||||||||||||||||
Sbjct 2517 ACCAGTTCTCACTCACGCCCTGACCCGGGCAGACATGATGGGGGGTGCAGGGGGCTGTGGGCATCCAGCGTCAT 2590
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2591 CCTCCAGAACCTCACATCTGAACTGGGGGCAGGTGCATACCTTGGGGAGGGAGTAGGGGGACACGGGGGACCAC 2664
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2665 CAGGTGTCCACGGTTGTCCCCAGCATCTCACATCAGACCTGGGGCAGGTGCGCAGTGTGGGGAGGGGATGGGGT 2738
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2739 GCGTCAGGGCCCAGCATCGCCGCCTGGCATCTCTCTGCCGCAGCATTTCCCCTTCTGAACCGTCCAGTGACTGC 2812
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2813 TTTCAATCTCGGTTTACGTTTAGAAATTGAGTTCTACTGAGTAGGGCTTCCTTAAGTTTAGGAAAATAGAAATT 2886
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2887 ACTTTGTGTGAAATTCTTGAATAAATAATTTATTCAGAGCTAGGAATGTGGTTTATAAAATAGGAAGTAATTGT 2960
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 2961 GTCAGGTCACTTTTATGCCACATTATTTTAATTGCAAAAAAGCATCTATATATGGAGGAGGGTGGGAAAATAGA 3034
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3035 GGTAGGAAATAGTAGCCTAAAGGAAATCGCCACACGTCTGTCTAAACTTAGGTCTCTTTTCTCCGTAGGTACCT 3108
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3109 CCCTGGGTAGTTCCACACACTAGGTTGTAACAGTCTCTCCCTGAGGAGCAGACTCCCAGCATGGTGTAGCGTGG 3182
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3183 CCCTGTCATGCACATGGGGTCCCGCAGCAGTGACTGTGTGTCCTGCAGAGGCGTGACCCAGGCCCCTGTAGCCC 3256
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3257 TCAGCCTCCTCTAGAAGCTTCTGTACTCCTTGTAGGATCAGATCATGGAAAACTTTTCTCAGTTTACTTCTAAG 3330
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3331 TAATCACAGATAATACATGGCCAGTAATCCCAGGCTGGCCATTCATTCAGGTTTTTTAAAGGATATTTAACTTT 3404
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3405 TATGGACTAGAAGGAATCACGAGGGCTACTGCACAATACATGGCCTAAGTTCCCTCTGTTCCTTCCTCTGAATC 3478
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3479 GAATGGATGTGGGTGACCGCCCGAAGGCCTTCACAGGATGGAAGTAGAATGATTTCAGTAGATACTCATTCTTG 3552
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3553 GAAAATGCCATAGTTTTAAATTATTGTTTCCAGCTTTATCAAAGACATGTTTGAAAAATAAAAAGCATCCAAGT 3626
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3627 GAGAGCTGGTGAGACCACGTGCTGCTGGCGTAGTGTAGGCCAGACATTGACAGTCCTGACGGGAGCTCAGGGCT 3700
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3701 GCCCAGCGCCCAGCGTGCACGGGACGGCCCCACGACAGAGGGAGTCAGCCCGGGAGGTCAGGAGCGCGGCGGGC 3774
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3775 GAGGGCCCTGTGTGGACCACCTCCACCAAGCTCAGAGATTTGCACCAGGTGCCTTGTTGCCTCCGCTCAGGATG 3848
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3849 AAAGAGGAGCTGAGAGAAGTGCTCTGCCTGCCAGTGCAGTGCCCAGCTCCAAGGCTCTAGAGGGTGTTCAGGTA 3922
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3923 CACTGAGGAGGGGACGGCTCCGTCTTCACATTGTGCACAGATCTGAGGATGGGATTAGCGAAGCTGTGGAGACT 3996
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3997 GCACATCCGGACCTGCCCATGTCTCAAAACAAACACATGTACAGTGGCTCTTTTTCCTTCTCAAACACTTTACC 4070
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4071 CCAGAAGCAGGTGGTCTGCCCCAGGCATAAAGAAGGAAAATTGGCCATCTTTCCCACCTCTAAATTCTGTAAAA 4144
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4145 TTATAGACTTGCTCAAAAGATTCCTTTTTATCATCCCCACGCTGTGTAAGTGGAAAGGGCATTGTGTTCCGTGT 4218
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4219 GTGTCCAGTTTACAGCGTCTCTGCCCCCTAGCGTGTTTTGTGACAATCTCCCTGGGTGAGGAGTGGGTGCACCC 4292
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4293 AGCCCCGAGGCCAGTGGTTGCTCGGGGCCTTCCGTGTGAGTTCTAGTGTTCACTTGATGCCGGGGAATAGAATT 4366
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4367 AGAGAAAACTCTGACCTGCCGGGTTCCAGGGACTGGTGGAGGTGGATGGCAGGTCCGACTCGACCATGACTTAG 4440
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4441 TTGTAAGGGTGTGTCGGCTTTTTCAGTCTCATGTGAAAATCCTCCTGTCTCTGGCAGCACTGTCTGCACTTTCT 4514
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4515 TGTTTACTGTTTGAAGGGACGAGTACCAAGCCACAAGAACACTTCTTTTGGCCACAGCATAAGCTGATGGTATG 4588
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4589 TAAGGAACCGATGGGCCATTAAACATGAACTGAACGGTTAAAAGCACAGTCTATGGAACGCTAATGGAGTCAGC 4662
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4663 CCCTAAAGCTGTTTGCTTTTTCAGGCTTTGGATTACATGCTTTTAATTTGATTTTAGAATCTGGACACTTTCTA 4736
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4737 TGAATGTAATTCGGCTGAGAAACATGTTGCTGAGATGCAATCCTCAGTGTTCTCTGTATGTAAATCTGTGTATA 4810
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 4811 CACCACACGTTACAACTGCATGAGCTTCCTCTCGCACAAGACCAGCTGGAACTGAGCATGAGACGCTGTCAAAT 4884
Query 2104 ------------------------------------------------- 2103
Sbjct 4885 ACAGACAAAGGATTTGAGATGTTCTCAATAAAAAGAAAATGTTTCACTA 4933