Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_06036
Subject:
NR_073193.1
Aligned Length:
2644
Identities:
353
Gaps:
2247

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GATAAATAAGGAAAACAGGGAAGGAACAAAGCATTGATTACACATGTAATAATAATGAGCAAATGTGGCAGGAA  74

Query    1  ----------------------------ATGACCATGGTAACAGTTGAATCCCAGCATGATGGAAGTATAACAG  46
                                        ||||||||||.||||||||||||.|||||.|||.|||||.|||||.
Sbjct   75  AAAGTATATGAGGACAAATGTAAGGCAAATGACCATGGAAACAGTTGAATCACAGCAGGATCGAAGTGTAACAC  148

Query   47  CTTCTTTGACAGAG---AGCAAGTCTGCTCATGTGCAGACTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCT  117
            .||||.||.|||||   |||   |||||||||.||      ||||||||.||||.|||..|.|||.||.|||||
Sbjct  149  GTTCTGTGGCAGAGCATAGC---TCTGCTCATATG------CAGACTGGTCAAATTTCTGTTCCTACTCTAGCT  213

Query  118  C-------------------------------------------------------------------------  118
            |                                                                         
Sbjct  214  CAGCTGTCCTGATTGCAGGCCCATGTCTGTGATGTTCTTAGCTGTATTGTGACATCACAAACTCCACGATGACG  287

Query  119  --------------------------------------------------------------------------  118
                                                                                      
Sbjct  288  GAACCTAGCTACGCACTGGAGCTGGTCTACTAGGTGCTGATCGCATGCTGTGCTACAACACTATTAACTACTGT  361

Query  119  --------------------------------------------------------------------------  118
                                                                                      
Sbjct  362  CTGTAGTGGGTTTTCAGTGGATGTGGTGGCATCAGCAGAACCTATGCTTCAGGCATCCTATAGAAGAAGATTAT  435

Query  119  ----------------------AGGTAGCAGCAATTGCAGAGACAGATGAATCTGCAGAATCAGAAGGTGTAAT  170
                                  ||||||||.|||||||||||||||||||.||||||||.||||||   |||||
Sbjct  436  TCTTCAGGGGATCTGGATAAAAAGGTAGCAACAATTGCAGAGACAGATGATTCTGCAGACTCAGAA---GTAAT  506

Query  171  TGATTCTCATAAACGTAGAGAAATCCTTTCACGAAGACCCTCTTATAGGAAAATACTGAATGAACTGTCCTCTG  244
            ||||||.|||||||||||||||||.|||||||||||||||||.|||||.|||||||||||||||||.|||||||
Sbjct  507  TGATTCGCATAAACGTAGAGAAATTCTTTCACGAAGACCCTCATATAGAAAAATACTGAATGAACTTTCCTCTG  580

Query  245  ATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGAGATCAGAGGAAGAAGGAACACCACCTAGTATTGCTACCATG  318
            |||||||||||.|||||||||||||||||||.|.|||||||||||||||.||||||||||..||||||||||||
Sbjct  581  ATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAAATCAGAGGAAGAAGGGACACCACCTAACATTGCTACCATG  654

Query  319  GCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACAGT-----ATGT---ATGCTGCA---------  375
            |||||||||||||||||||||||||||||||||||||||||||.|     |.||   ||||  ||         
Sbjct  655  GCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACACTGCCACAGGTGACATGC--CAACTTACCAG  726

Query  376  ATTCGA--------------TATGATACA-------GTGCTAGCT---------TTAAGTCTTCTC--------  411
            ||.|||              |.||..|||       |||.|.|||         ..|||.||.|.|        
Sbjct  727  ATCCGAGCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCTGCCTCACCAGGAAGCCTGCACAGTCCCCA  800

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct  801  GCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCTGATGAAAAACAGGGAAGCTGCCCGGGAGTGTC  874

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct  875  GCAGGAAGAAGAAAGAATATGTCAAATGTCTTGAAAATCGTGTGGCTGTGCTTGAAAATCAAAACAAGACCCTC  948

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct  949  ATTGAGGAACTCAAGGCCCTCAAAGACCTTTATTGCCATAAAGCAGAGTAACTGTGTTTGATTTGGACCTTGTT  1022

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1023  GACTGTGAACTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTT  1096

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1097  AACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTC  1170

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1171  CCCTCACATTACCAAGCTTGCTCTATTGCCAATAGCATGCAACATATGTTTTGTTTGCCCTTCTGCTTCTACTT  1244

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1245  TTTTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGAGTCGCA  1318

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1319  GTGCTGGAAGTTCAGAACAAGAAGCTTATAGAGGAGCTTGAAACTTTGAAAGACATTTGCTCTCCCAAAACAGA  1392

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1393  TTAGTAGAAATATTTAACTATGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG  1466

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1467  GCAAGAATTATGGCTTTTTCCTTTGTATCATTCATCTAACTTTCTAAAACTAACATTCCTAAGATGCTTTGTTG  1540

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1541  TATTTAATTTGCTCTTACCTCTAAGGTCAATTTTTTAGAAGAGACAAACTGTAAAAAATGTATGTAACAAATTC  1614

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1615  TTAAAATGAAGTATTTGTAAGACTTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGT  1688

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1689  GTCCTATGCAATAAAAATTTTGCAGGTTTTAAGAATCATTTTAGGAAAGGGTGATCAAAGGCAGTGCATCTCTC  1762

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1763  CAGTAGTAAGATAAAATCAACCCATAGAGATACCTCAGGAAAGAATGAAAGGAAGTGTATCCTGATGACATGAC  1836

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1837  TACGTGAGAATAGCCTACAAATGAATTTATGCATTTATAGATTTTTATAATCGTCACTTTGTAAAGAAAGTATT  1910

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1911  GTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCATGTTGGTTGCTCTTTGTACTATTT  1984

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1985  GGTATTTATTTAAGTATCTGAGCATTTACTACAGCTTCCTACTATGTATGTAGTATGTGAATTTCTACAAAAGT  2058

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 2059  TTGTGCTGCTTTGCTGTTATTTAATGAAAGAGACAACATATTTTCATTATCTGGAATGAGTTCCACAAGTATGA  2132

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 2133  ATTTATTGCTACACTGGATCAGCAGCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAGGGCTCTAG  2206

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 2207  GAGCAGAGTTCAGTGTGGAGCACTTGCCTGGCATGCTACATGTTCAGTTGAAAGGGAAGACCTCAAGCTCTGCA  2280

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 2281  AATGGAATGGGGTCCAGGGGAAGAGGTTAGAGGTTAGCCTTTGTGCTGTACTAGGCTTCTTGCTGATCGTCTGG  2354

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 2355  AGAGTTTCTGCTGATGACCCTCCATTGTGAATTCTTGCAACCTCAGGAATGTTAACGTTTAAAAAACAACCCAA  2428

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 2429  GATGTCATTTTTGATTTTACAACTTGGATCAATTTTGTTTTGCTCTTTGGAATATAGCTGTGTACATTTGTCAC  2502

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 2503  GTAGGTTTAGGCTGGCCTTAAACTCACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGC  2576

Query  412  ------------------------------------------------------  411
                                                                  
Sbjct 2577  CAGAATATCCAGTTTGATCAAGTATTCTTTTATAAAATATTACTTTCTTTTTAA  2630

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