Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06036
- Subject:
- NR_073193.1
- Aligned Length:
- 2644
- Identities:
- 353
- Gaps:
- 2247
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GATAAATAAGGAAAACAGGGAAGGAACAAAGCATTGATTACACATGTAATAATAATGAGCAAATGTGGCAGGAA 74
Query 1 ----------------------------ATGACCATGGTAACAGTTGAATCCCAGCATGATGGAAGTATAACAG 46
||||||||||.||||||||||||.|||||.|||.|||||.|||||.
Sbjct 75 AAAGTATATGAGGACAAATGTAAGGCAAATGACCATGGAAACAGTTGAATCACAGCAGGATCGAAGTGTAACAC 148
Query 47 CTTCTTTGACAGAG---AGCAAGTCTGCTCATGTGCAGACTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCT 117
.||||.||.||||| ||| |||||||||.|| ||||||||.||||.|||..|.|||.||.|||||
Sbjct 149 GTTCTGTGGCAGAGCATAGC---TCTGCTCATATG------CAGACTGGTCAAATTTCTGTTCCTACTCTAGCT 213
Query 118 C------------------------------------------------------------------------- 118
|
Sbjct 214 CAGCTGTCCTGATTGCAGGCCCATGTCTGTGATGTTCTTAGCTGTATTGTGACATCACAAACTCCACGATGACG 287
Query 119 -------------------------------------------------------------------------- 118
Sbjct 288 GAACCTAGCTACGCACTGGAGCTGGTCTACTAGGTGCTGATCGCATGCTGTGCTACAACACTATTAACTACTGT 361
Query 119 -------------------------------------------------------------------------- 118
Sbjct 362 CTGTAGTGGGTTTTCAGTGGATGTGGTGGCATCAGCAGAACCTATGCTTCAGGCATCCTATAGAAGAAGATTAT 435
Query 119 ----------------------AGGTAGCAGCAATTGCAGAGACAGATGAATCTGCAGAATCAGAAGGTGTAAT 170
||||||||.|||||||||||||||||||.||||||||.|||||| |||||
Sbjct 436 TCTTCAGGGGATCTGGATAAAAAGGTAGCAACAATTGCAGAGACAGATGATTCTGCAGACTCAGAA---GTAAT 506
Query 171 TGATTCTCATAAACGTAGAGAAATCCTTTCACGAAGACCCTCTTATAGGAAAATACTGAATGAACTGTCCTCTG 244
||||||.|||||||||||||||||.|||||||||||||||||.|||||.|||||||||||||||||.|||||||
Sbjct 507 TGATTCGCATAAACGTAGAGAAATTCTTTCACGAAGACCCTCATATAGAAAAATACTGAATGAACTTTCCTCTG 580
Query 245 ATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGAGATCAGAGGAAGAAGGAACACCACCTAGTATTGCTACCATG 318
|||||||||||.|||||||||||||||||||.|.|||||||||||||||.||||||||||..||||||||||||
Sbjct 581 ATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAAATCAGAGGAAGAAGGGACACCACCTAACATTGCTACCATG 654
Query 319 GCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACAGT-----ATGT---ATGCTGCA--------- 375
|||||||||||||||||||||||||||||||||||||||||||.| |.|| |||| ||
Sbjct 655 GCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACACTGCCACAGGTGACATGC--CAACTTACCAG 726
Query 376 ATTCGA--------------TATGATACA-------GTGCTAGCT---------TTAAGTCTTCTC-------- 411
||.||| |.||..||| |||.|.||| ..|||.||.|.|
Sbjct 727 ATCCGAGCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCTGCCTCACCAGGAAGCCTGCACAGTCCCCA 800
Query 412 -------------------------------------------------------------------------- 411
Sbjct 801 GCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCTGATGAAAAACAGGGAAGCTGCCCGGGAGTGTC 874
Query 412 -------------------------------------------------------------------------- 411
Sbjct 875 GCAGGAAGAAGAAAGAATATGTCAAATGTCTTGAAAATCGTGTGGCTGTGCTTGAAAATCAAAACAAGACCCTC 948
Query 412 -------------------------------------------------------------------------- 411
Sbjct 949 ATTGAGGAACTCAAGGCCCTCAAAGACCTTTATTGCCATAAAGCAGAGTAACTGTGTTTGATTTGGACCTTGTT 1022
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1023 GACTGTGAACTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTT 1096
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1097 AACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTC 1170
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1171 CCCTCACATTACCAAGCTTGCTCTATTGCCAATAGCATGCAACATATGTTTTGTTTGCCCTTCTGCTTCTACTT 1244
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1245 TTTTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGAGTCGCA 1318
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1319 GTGCTGGAAGTTCAGAACAAGAAGCTTATAGAGGAGCTTGAAACTTTGAAAGACATTTGCTCTCCCAAAACAGA 1392
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1393 TTAGTAGAAATATTTAACTATGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG 1466
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1467 GCAAGAATTATGGCTTTTTCCTTTGTATCATTCATCTAACTTTCTAAAACTAACATTCCTAAGATGCTTTGTTG 1540
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1541 TATTTAATTTGCTCTTACCTCTAAGGTCAATTTTTTAGAAGAGACAAACTGTAAAAAATGTATGTAACAAATTC 1614
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1615 TTAAAATGAAGTATTTGTAAGACTTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGT 1688
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1689 GTCCTATGCAATAAAAATTTTGCAGGTTTTAAGAATCATTTTAGGAAAGGGTGATCAAAGGCAGTGCATCTCTC 1762
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1763 CAGTAGTAAGATAAAATCAACCCATAGAGATACCTCAGGAAAGAATGAAAGGAAGTGTATCCTGATGACATGAC 1836
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1837 TACGTGAGAATAGCCTACAAATGAATTTATGCATTTATAGATTTTTATAATCGTCACTTTGTAAAGAAAGTATT 1910
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1911 GTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCATGTTGGTTGCTCTTTGTACTATTT 1984
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1985 GGTATTTATTTAAGTATCTGAGCATTTACTACAGCTTCCTACTATGTATGTAGTATGTGAATTTCTACAAAAGT 2058
Query 412 -------------------------------------------------------------------------- 411
Sbjct 2059 TTGTGCTGCTTTGCTGTTATTTAATGAAAGAGACAACATATTTTCATTATCTGGAATGAGTTCCACAAGTATGA 2132
Query 412 -------------------------------------------------------------------------- 411
Sbjct 2133 ATTTATTGCTACACTGGATCAGCAGCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAGGGCTCTAG 2206
Query 412 -------------------------------------------------------------------------- 411
Sbjct 2207 GAGCAGAGTTCAGTGTGGAGCACTTGCCTGGCATGCTACATGTTCAGTTGAAAGGGAAGACCTCAAGCTCTGCA 2280
Query 412 -------------------------------------------------------------------------- 411
Sbjct 2281 AATGGAATGGGGTCCAGGGGAAGAGGTTAGAGGTTAGCCTTTGTGCTGTACTAGGCTTCTTGCTGATCGTCTGG 2354
Query 412 -------------------------------------------------------------------------- 411
Sbjct 2355 AGAGTTTCTGCTGATGACCCTCCATTGTGAATTCTTGCAACCTCAGGAATGTTAACGTTTAAAAAACAACCCAA 2428
Query 412 -------------------------------------------------------------------------- 411
Sbjct 2429 GATGTCATTTTTGATTTTACAACTTGGATCAATTTTGTTTTGCTCTTTGGAATATAGCTGTGTACATTTGTCAC 2502
Query 412 -------------------------------------------------------------------------- 411
Sbjct 2503 GTAGGTTTAGGCTGGCCTTAAACTCACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGC 2576
Query 412 ------------------------------------------------------ 411
Sbjct 2577 CAGAATATCCAGTTTGATCAAGTATTCTTTTATAAAATATTACTTTCTTTTTAA 2630
