Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_06036
• Subject: XM_006525555.3
• Aligned Length: 1081
• Identities: 363
• Gaps: 680

Alignment

Query    1  ------------------------------------------------ATGACCATGGTAACAGTTGAATCCCA  26
                                                            ||||||||||.||||||||||||.||
Sbjct    1  ATGAGCAAATGTGGCAGGAAAAAGTATATGAGGACAAATGTAAGGCAAATGACCATGGAAACAGTTGAATCACA  74

Query   27  GCATGATGGAAGTATAACAGCTTCTTTGACAGAG---AGCAAGTCTGCTCATGTGCAGA---------------  82
            |||.|||.|||||.|||||..||||.||.|||||   |||   |||||||||.||||||               
Sbjct   75  GCAGGATCGAAGTGTAACACGTTCTGTGGCAGAGCATAGC---TCTGCTCATATGCAGACTGGTCAAATTTCTG  145

Query   83  ------------CTCAG---------------------ACT---------------------------------  90
                        |||||                     |||                                 
Sbjct  146  TTCCTACTCTAGCTCAGGTTTCTGTAGCTGGATCAGGCACTGGAAGAGGCTCCCCAGCTGTGACTCTAGTACAG  219

Query   91  ---------GGCCAAA--------------------ATTCA--------ATCCCTGCTTTA-------------  114
                     |||||||                    |||||        ||||.|...|||             
Sbjct  220  TTACCTTCAGGCCAAACTGTACAGGTCCAGGGAGTTATTCAGACACCACATCCATCGGTTATTCAATCACCACA  293

Query  115  ----------GCTCAGGTAGCAGCAATTGCAGAGACAGATGAATCTGCAGAATCAGAAGGTGTAATTGATTCTC  178
                      |.||||||||||.|||||||||||||||||||.||||||||.||||||   |||||||||||.|
Sbjct  294  AATACAAACTGTTCAGGTAGCAACAATTGCAGAGACAGATGATTCTGCAGACTCAGAA---GTAATTGATTCGC  364

Query  179  ATAAACGTAGAGAAATCCTTTCACGAAGACCCTCTTATAGGAAAATACTGAATGAACTGTCCTCTGATGTGCCT  252
            ||||||||||||||||.|||||||||||||||||.|||||.|||||||||||||||||.|||||||||||||||
Sbjct  365  ATAAACGTAGAGAAATTCTTTCACGAAGACCCTCATATAGAAAAATACTGAATGAACTTTCCTCTGATGTGCCT  438

Query  253  GGTGTTCCCAAGATTGAAGAAGAGAGATCAGAGGAAGAAGGAACACCACCTAGTATTGCTACCATGGCAGTACC  326
            |||.|||||||||||||||||||.|.|||||||||||||||.||||||||||..||||||||||||||||||||
Sbjct  439  GGTATTCCCAAGATTGAAGAAGAAAAATCAGAGGAAGAAGGGACACCACCTAACATTGCTACCATGGCAGTACC  512

Query  327  AACTAGCATATATCAGACTAGCACGGGGCAATACAGTATG-TAT-GCTGCAA-----------------TTC--  379
            |||||||||||||||||||||||||||||||||||  .|| ||| ||| |||                 |||  
Sbjct  513  AACTAGCATATATCAGACTAGCACGGGGCAATACA--TTGCTATAGCT-CAAGGTGGAACAATCCAGATTTCTA  583

Query  380  ------GATATGAT------------------------ACAGTGCTAGCTTTA--AGTCTTCTC----------  411
                  |||.||||                        |||.||..|..||.|  || ||.|||          
Sbjct  584  ACCCAGGATCTGATGGTGTTCAGGGACTCCAGGCATTAACAATGACAAATTCAGGAG-CTCCTCCGCCAGGTGC  656

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct  657  TACAATTGTACAGTATGCAGCACAATCAGCCGATGGTACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTTG  730

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct  731  TTCAAGATGAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTGCCACAGGTGACATGCCAACTTACCAGATC  804

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct  805  CGAGCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCTGCCTCACCAGGAAGCCTGCACAGTCCCCAGCA  878

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct  879  ACTAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCTGATGAAAAACAGGGAAGCTGCTAAAGAATGTCGAC  952

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct  953  GTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTATA  1026

Query  412  ---------------------------------------------  411
                                                         
Sbjct 1027  GAGGAGCTTGAAACTTTGAAAGACATTTGCTCTCCCAAAACAGAT  1071