Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06254
- Subject:
- NR_152150.2
- Aligned Length:
- 1114
- Identities:
- 607
- Gaps:
- 460
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTCTCTGCTCCTCCTGTTCGACAGTCAGCCGCATCTTCTTTTGCGTCGCCAGCCGAGCCACATCGCTCAGACA 74
Query 1 --ATGGGGAAGGTGAAGGTCGGAGTCAACGGATTTGGTCGTATTGGGCGCCTGGTCACCAGGGCTGCTTTTAAC 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCATGGGGAAGGTGAAGGTCGGAGTCAACGGATTTGGTCGTATTGGGCGCCTGGTCACCAGGGCTGCTTTTAAC 148
Query 73 TCTGGTAAAGTGGATATTGTTGCCATCAATGACCCCTTCATTGACCTCAACTACATGGTTTACATGTTCCAATA 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCTGGTAAAGTGGATATTGTTGCCATCAATGACCCCTTCATTGACCTCAACTACATGGTTTACATGTTCCAATA 222
Query 147 TGATTCCACCCATGGCAAATTCCATGGCACCGTCAAGGCTGAGAACGGGAAGCTTGTCATCAATGGAAATCCCA 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGATTCCACCCATGGCAAATTCCATGGCACCGTCAAGGCTGAGAACGGGAAGCTTGTCATCAATGGAAATCCCA 296
Query 221 TCACCATCTTCCAGGAGCGAGATCCCTCCAAAATCAAGTGGGGCGATGCTGGCGCTGAGTACGTCGTGGAGTCC 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCACCATCTTCCAGGAGCGAGATCCCTCCAAAATCAAGTGGGGCGATGCTGGCGCTGAGTACGTCGTGGAGTCC 370
Query 295 ACTGGCGTCTTCACCACCATGGAGAAGGCTGGGGCTCATTTGCAGGGGGGAGCCAAAAGGGTCATCATCTCTGC 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACTGGCGTCTTCACCACCATGGAGAAGGCTGGGGCTCATTTGCAGGGGGGAGCCAAAAGGGTCATCATCTCTGC 444
Query 369 CCCCTCTGCTGACGCCCCCATGTTCGTCATGGGTGTGAACCATGAGAAGTATGACAACAGCCTCAAGATCAT-- 440
||||||||||||.||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 445 CCCCTCTGCTGATGCCCCCATGTTCGTCATGGGTGTGAACCATGAGAAGTATGACAAC--------GA--ATTT 508
Query 441 -----CAGCAATGCCTCCTGCACCACCAACTGCTTAGCACCCCTGGCCAAGGTCATCCATGACAACTTTGGTAT 509
|||||| ||.|| ||||
Sbjct 509 GGCTACAGCAA------------------------------------CAGGG----------------TGGT-- 528
Query 510 CGTGGAAGGA-CTCATGACCACAGTCCATGCCATCACTGCCACCCAG----AAGACTGTGGATGGCCCCTCCGG 578
||| ||||||.|| || |||| |||.||.|| |||| ||||| |
Sbjct 529 -------GGACCTCATGGCC-CA---CATG--------GCCTCCAAGGAGTAAGA----------CCCCT---G 570
Query 579 GAAACTGTGGCGTGATGGCCGCGGGGCTCTCCAGAACATCATCCCTGCCTCTACTGGCGCTGCCAAGGCTGTGG 652
|| ||| ||.||| |||
Sbjct 571 GA----------------------------CCA----------CCAGCC-------------CCA--------- 584
Query 653 GCAAGGTCATCCCTGAGCTGAACGGGAAG---------CTCACTGGCATGGCCTTCCGTGTCCCCACTGCCA-A 716
|||| ||||..||..||||| ||||||| ||...|.|||| |||||| |
Sbjct 585 GCAA----------GAGCACAAGAGGAAGAGAGAGACCCTCACTG-------CTGGGGAGTCC---CTGCCACA 638
Query 717 CGTGTCAGTGGTGGACCTGAC-----CTGCCGTCTAGAAAAACCTGCCAAATATGATGACATCAAGAAGGTGG- 784
| |||||.....|||..|| ||.||.| |||..|| |.||.||| ||.|
Sbjct 639 C---TCAGTCCCCCACCACACTGAATCTCCCCT---------CCTCACA-----GTTGCCAT-------GTAGA 688
Query 785 -----TGAAGCAGGCGTCGGAGGGCCCCCTCAAGGGCATCCTGGGCTACACTGAGCACCAGGTGGTCTCCTCTG 853
||||| ||| ||||||.| |.|||| |.|| ||||| .|.||.|.|.
Sbjct 689 CCCCTTGAAG-AGG----GGAGGGGC----CTAGGG-AGCC-------------GCACC-----TTGTCATGTA 734
Query 854 ACTTCAACAGCGACACCCACTCCTCCACCTTCGACGCTGGGGCTGGCATTGCCCTCAACGACCACTTTGTCAAG 927
.|.||||.|..| .||||..|.|||.|||.
Sbjct 735 CCATCAATAAAG-TACCCTGTGCTCAACCA-------------------------------------------- 763
Query 928 CTCATTTCCTGGTATGACAACGAATTTGGCTACAGCAACAGGGTGGTGGACCTCATGGCCCACATGGCCTCCAA 1001
Sbjct 764 -------------------------------------------------------------------------- 763
Query 1002 GGAG 1005
Sbjct 764 ---- 763
