Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06391
- Subject:
- NR_153503.1
- Aligned Length:
- 2777
- Identities:
- 1260
- Gaps:
- 1432
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGTGACCGACCGTCGGAGGCGGCGCGGCCGGGAGGCAACGGCGGACTCGCGCGATTGGTGGATCCATTTAATT 74
Query 1 -------ATGGAAACTGAACAGCCAGAAGAAACCTTCCCTAACACTGAAACCAATGGTGAATTTGGTAAACGCC 67
|||||.||.|||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||
Sbjct 75 CAAGAAAATGGAGACCGAACAGCCAGAAGAAACCTTCCCCAACACCGAAACCAATGGTGAATTTGGTAAACGCC 148
Query 68 CTGCAGAAGATATGGAAGAGGAACAAGCATTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATT 141
||||||||||||||||||||||.|||||.|||||||||||||||||.||||||||||||||||||||.||||||
Sbjct 149 CTGCAGAAGATATGGAAGAGGAGCAAGCCTTTAAAAGATCTAGAAATACTGATGAGATGGTTGAATTGCGCATT 222
Query 142 CTGCTTCAGAGCAAGAATGCTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTA 215
.||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTGCTTCAGAGCAAGAATGCTGGAGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGAC-- 294
Query 216 CAATGCCAGTGTTTCAGTCCCAGACAGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAA 289
||||.||||||||||||||||||||||.||.|
Sbjct 295 ------------------------------------------CATACTGAGTATCAGTGCTGATATTGAGACGA 326
Query 290 TTGGAGAAATTCTGAAGAAAATCATCCCTACCTTGGAAGAGGGCCTGCAGTTGCCATCACCCGCTGCAACCAGC 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 327 TTGGAGAAATTCTGAAGAAAATCATCCCTACCTTGGAAGAGGGCCTGCAGTTGCCATCACCCACTGCAACCAGC 400
Query 364 CAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAAATTACCAACACTATAAAGGAAGTGACTTTGACTGCGA 437
|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||
Sbjct 401 CAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAAATTACCAACATTATAAAGGAAGTGACTTTGATTGCGA 474
Query 438 GTTGAGGCTGTTGATTCATCAGAGTCTAGCAGGAGGAATTATTGGGGTCAAAGGTGCTAAAATCAAAGAACTTC 511
||||||.||||||||||||||||||||.|||||||||||.|||||.||.|||||||||||||||||||||||||
Sbjct 475 GTTGAGACTGTTGATTCATCAGAGTCTGGCAGGAGGAATAATTGGTGTTAAAGGTGCTAAAATCAAAGAACTTC 548
Query 512 GAGAGAACACTCAAACCACCATCAAGCTTTTCCAGGAATGCTGTCCTCATTCCACTGACAGAGTTGTTCTTATT 585
||||.||||||||.||.||.|||||||||||||||||.|||||.|||||.||.|||||||||||||||||||||
Sbjct 549 GAGAAAACACTCAGACAACAATCAAGCTTTTCCAGGAGTGCTGCCCTCACTCTACTGACAGAGTTGTTCTTATT 622
Query 586 GGAGGAAAACCCGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATATCTGAGTCTCCCATCAAAGG 659
|||||||||||.||||||||||||||.|||||.||||||||||||||.||||||||||||||||||||||||||
Sbjct 623 GGAGGAAAACCTGATAGGGTTGTAGAATGCATCAAGATCATCCTTGACCTTATATCTGAGTCTCCCATCAAAGG 696
Query 660 ACGTGCACAGCCTTATGATCCCAATTTTTACGATGAAACCTATGATTATGGTGGTTTTACAATGATGTTTGATG 733
|||||||||.||||||||||||||.|||||.|||||.|||||||||||||||||||||||||||||||||||||
Sbjct 697 ACGTGCACAACCTTATGATCCCAACTTTTATGATGAGACCTATGATTATGGTGGTTTTACAATGATGTTTGATG 770
Query 734 ACCGTCGCGGACGCCCAGTGGGATTTCCCATGCGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGGTCGGGGT 807
||||.||.|||||.||.||||||||.||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 771 ACCGCCGAGGACGACCTGTGGGATTCCCCATGAGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGGTCGGGGT 844
Query 808 GGGCGTCCCATGCCTCCATCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCACCTCCCCCTCCTCC 881
|||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||.||.||.||.||
Sbjct 845 GGGCGTCCCATGCCTCCTTCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCTCCACCACCACCACC 918
Query 882 CGGACGAGGCGGCCGGGGTGGTAGCAGAGCTCGGAATCTTCCTCTTCCTCCACCACCACCACCTAGAGGGGGAG 955
.||.|||||.|||||||||||.||||||||.||||||||.|||||||||||.|||||||||||.||||||||||
Sbjct 919 TGGTCGAGGTGGCCGGGGTGGCAGCAGAGCCCGGAATCTGCCTCTTCCTCCTCCACCACCACCCAGAGGGGGAG 992
Query 956 ACCTCATGGCCTATGACAGAAGAGGGAGACCTGGAGACCGTTACGACGGCATGGTTGGTTTCAGTGCTGATGAA 1029
|.||.|||||.||||||||||||||.||.|||||||||||.||.||.|||||||||||.|||||||||||||||
Sbjct 993 ATCTAATGGCTTATGACAGAAGAGGAAGGCCTGGAGACCGCTATGATGGCATGGTTGGGTTCAGTGCTGATGAA 1066
Query 1030 ACTTGGGACTCTGCAATAGATACATGGAGCCCATCAGAATGGCAGATGGCTTATGAACCACAGGGTGGCTCCGG 1103
||||||||.||||||||.||.|||||||||||||||||||||||.|||||||||||||||||||||||.||.||
Sbjct 1067 ACTTGGGATTCTGCAATTGACACATGGAGCCCATCAGAATGGCAAATGGCTTATGAACCACAGGGTGGTTCTGG 1140
Query 1104 ATATGATTATTCCTATGCAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAA 1177
||||||.|||||.|||||||||||.|||||||||||||||||||||||.|||||||||||.|||||||||||||
Sbjct 1141 ATATGACTATTCTTATGCAGGGGGCCGTGGCTCATATGGTGATCTTGGCGGACCTATTATCACTACACAAGTAA 1214
Query 1178 CTATTCCCAAAGATTTGGCTGGATCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCG 1251
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.
Sbjct 1215 CTATTCCCAAAGATTTGGCTGGATCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATTCGTCATGAATCT 1288
Query 1252 GGAGCTTCGATCAAAATTGATGAGCCTTTAGAAGGATCCGAAGATCGGATCATTACCATTACAGGAACACAGGA 1325
|||||.||.||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 1289 GGAGCATCAATCAAAATTGATGAACCTTTAGAAGGATCTGAAGATCGGATCATTACCATTACAGGAACACAGGA 1362
Query 1326 CCAGATACAGAATGCACAGTATTTGCTGCAGAAC---------------------------------------- 1359
||||||||||||.|||||||||||||||||||||
Sbjct 1363 CCAGATACAGAACGCACAGTATTTGCTGCAGAACAGTGTGAAGCAGTATGCAGATGTTGAAGGATTCTAATGCA 1436
Query 1360 --------------------AGTGTGAAGCAGTATTCTGGAAAGTTTTTC------------------------ 1389
||||||||||||||||||||||||||||||
Sbjct 1437 AGATATTTTTTCTTTTTTATAGTGTGAAGCAGTATTCTGGAAAGTTTTTCTAAGACTAGTGAAGAACTGAAGGA 1510
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 1511 GTCCTGCATCTTTTTTTTTTTATCTGCTTCTGTTTAAAAAGCCAACATTCCTCTGCTTCATAGGTGTTCTGCAT 1584
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 1585 TTGAGGTGTAGTGAAATCTTTGCTGTTCACCAGATGTAATGTTTTAGTTCCTTACAAACAGGGTTGGGGGGAGG 1658
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 1659 GCATGCAAAAACTAACATTGAAATTTTGAAACAGCAGCAGAGTGAGTGACTTTTATTTTTTGTTCATTGTTGGT 1732
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 1733 GGTTTTAAAAAAAATTCCCCCCATGTAATTATTGTGAACACCTTACTTTGTGGTCACTGTAACATTGGGGGGTG 1806
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 1807 GGACAGGGAGGAAAGTAATAGTCCACATGTCCCTGGCATTTGTTCAGAGCAGTGTGCAGAATGTAATGCTCTTT 1880
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 1881 TGTAAGAAACGTTTTATGATTTTTAAAATAAATTTAGTGAATCTATTTTTGGTGGTCTTTTTTTTTTTTAAGAC 1954
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 1955 AATTTCAAATGGTGGTTGAATTTTCCAGCCCACCCCTAAACTAAACACTAAGTTTGATTTTCAGCAGCTCCTCT 2028
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 2029 GTTGGATATAAGTGCACCTCTTGGACATAGACAAAATACATTGGCAAACTCAGTTTGGGTGACTTCTTAATGGT 2102
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 2103 TGGAAAGACTTGGCTTGATAAATTTCCATCACATATTCATGCTTATAATAAGCTTGGGATTTTGTTTGTTTTTG 2176
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 2177 CAAATGTTTGCCACTACTTTTCAACAGTTTTCTGTTAGTTGTGGAGAACTGCGGTGGGGAGCAATACTACAAGA 2250
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 2251 GTTACGCATCTTAAGTATATGCCAGAAGCCTGATGGGCAATGAGCTTTATTAACCAGAGTAAACTTGGTTATGG 2324
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 2325 AAGTGGCTGATGCTGAATAAATCCTGGTTATTTTTGTTAGATAATTTCTCACCTATAGACTTAAAGCTGTCAAC 2398
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 2399 CTGCTAGTGTCTTGTTAGTTGAACTTTGTAAAAATATATATATATACTTGTTTTTCCATTGTATGCACAATGAA 2472
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 2473 AGAAAAAAGATGTACCATTTCTCTGTTGTGTGTTGAATTATGTAGGAAATGTTTGTGAACGATTCGAAAAAAAT 2546
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 2547 GGAAAAAGTTCCTGTGGATGTTTTGTGTAGTAACTTGGCATCTGTATTGATAGTTCAAAATCCACATCTAAATA 2620
Query 1390 -------------------------------------------------------------------------- 1389
Sbjct 2621 AAACTTCCATGATGTTAGTTATGACGTGTGCCCAATTTGAAAAGGGGTTGATTAATACATGTAAAGTTTGTTGA 2694
Query 1390 --------------------------------------- 1389
Sbjct 2695 AGTGTTCCTCTTGTAAGGAAATACAGTAATCTTAAATTA 2733
