Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_06391
Subject:
NR_153504.1
Aligned Length:
2783
Identities:
1189
Gaps:
1510

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTGCGCGAACGAGAAAGGAGGAGGGCGCTACAGGCGACAGCGCTGCAGACGCCATTATCCTCTGCTTCTCCGC  74

Query    1  -------------------------------------------------------------------------A  1
                                                                                     |
Sbjct   75  TGCACGGACGTCGCCGTCGTGCTCGTCTCCCACTCGATTGCGGCCTATTGGTGGATCCATTTAATTCAAGAAAA  148

Query    2  TGGAAACTGAACAGCCAGAAGAAACCTTCCCTAACACTGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAA  75
            ||||.||.|||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||
Sbjct  149  TGGAGACCGAACAGCCAGAAGAAACCTTCCCCAACACCGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAA  222

Query   76  GATATGGAAGAGGAACAAGCATTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCA  149
            ||||||||||||||.|||||.|||||||||||||||||.||||||||||||||||||||.||||||.|||||||
Sbjct  223  GATATGGAAGAGGAGCAAGCCTTTAAAAGATCTAGAAATACTGATGAGATGGTTGAATTGCGCATTTTGCTTCA  296

Query  150  GAGCAAGAATGCTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTACAATGCCA  223
            |||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct  297  GAGCAAGAATGCTGGAGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGAC----------  360

Query  224  GTGTTTCAGTCCCAGACAGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAA  297
                                              ||||.||||||||||||||||||||||.||.|||||||||
Sbjct  361  ----------------------------------CATACTGAGTATCAGTGCTGATATTGAGACGATTGGAGAA  400

Query  298  ATTCTGAAGAAAATCATCCCTACCTTGGAAGAGGGCCTGCAGTTGCCATCACCCGCTGCAACCAGCCAGCTCCC  371
            |||||||||||||||||||||||||||||||||                                         
Sbjct  401  ATTCTGAAGAAAATCATCCCTACCTTGGAAGAG-----------------------------------------  433

Query  372  GCTCGAATCTGATGCTGTGGAATGCTTAAATTACCAACACTATAAAGGAAGTGACTTTGACTGCGAGTTGAGGC  445
                                           ||||||||.||||||||||||||||||||.|||||||||||.|
Sbjct  434  -------------------------------TACCAACATTATAAAGGAAGTGACTTTGATTGCGAGTTGAGAC  476

Query  446  TGTTGATTCATCAGAGTCTAGCAGGAGGAATTATTGGGGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAAC  519
            |||||||||||||||||||.|||||||||||.|||||.||.|||||||||||||||||||||||||||||.|||
Sbjct  477  TGTTGATTCATCAGAGTCTGGCAGGAGGAATAATTGGTGTTAAAGGTGCTAAAATCAAAGAACTTCGAGAAAAC  550

Query  520  ACTCAAACCACCATCAAGCTTTTCCAGGAATGCTGTCCTCATTCCACTGACAGAGTTGTTCTTATTGGAGGAAA  593
            |||||.||.||.|||||||||||||||||.|||||.|||||.||.|||||||||||||||||||||||||||||
Sbjct  551  ACTCAGACAACAATCAAGCTTTTCCAGGAGTGCTGCCCTCACTCTACTGACAGAGTTGTTCTTATTGGAGGAAA  624

Query  594  ACCCGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATATCTGAGTCTCCCATCAAAGGACGTGCAC  667
            |||.||||||||||||||.|||||.||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct  625  ACCTGATAGGGTTGTAGAATGCATCAAGATCATCCTTGACCTTATATCTGAGTCTCCCATCAAAGGACGTGCAC  698

Query  668  AGCCTTATGATCCCAATTTTTACGATGAAACCTATGATTATGGTGGTTTTACAATGATGTTTGATGACCGTCGC  741
            |.||||||||||||||.|||||.|||||.|||||||||||||||||||||||||||||||||||||||||.||.
Sbjct  699  AACCTTATGATCCCAACTTTTATGATGAGACCTATGATTATGGTGGTTTTACAATGATGTTTGATGACCGCCGA  772

Query  742  GGACGCCCAGTGGGATTTCCCATGCGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGGTCGGGGTGGGCGTCC  815
            |||||.||.||||||||.||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  773  GGACGACCTGTGGGATTCCCCATGAGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGGTCGGGGTGGGCGTCC  846

Query  816  CATGCCTCCATCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCACCTCCCCCTCCTCCCGGACGAG  889
            |||||||||.|||||||||||||||||||||||||||||||||||||||||.||.||.||.||.||.||.||||
Sbjct  847  CATGCCTCCTTCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCTCCACCACCACCACCTGGTCGAG  920

Query  890  GCGGCCGGGGTGGTAGCAGAGCTCGGAATCTTCCTCTTCCTCCACCACCACCACCTAGAGGGGGAGACCTCATG  963
            |.|||||||||||.||||||||.||||||||.|||||||||||.|||||||||||.|||||||||||.||.|||
Sbjct  921  GTGGCCGGGGTGGCAGCAGAGCCCGGAATCTGCCTCTTCCTCCTCCACCACCACCCAGAGGGGGAGATCTAATG  994

Query  964  GCCTATGACAGAAGAGGGAGACCTGGAGACCGTTACGACGGCATGGTTGGTTTCAGTGCTGATGAAACTTGGGA  1037
            ||.||||||||||||||.||.|||||||||||.||.||.|||||||||||.|||||||||||||||||||||||
Sbjct  995  GCTTATGACAGAAGAGGAAGGCCTGGAGACCGCTATGATGGCATGGTTGGGTTCAGTGCTGATGAAACTTGGGA  1068

Query 1038  CTCTGCAATAGATACATGGAGCCCATCAGAATGGCAGATGGCTTATGAACCACAGGGTGGCTCCGGATATGATT  1111
            .||||||||.||.|||||||||||||||||||||||.|||||||||||||||||||||||.||.||||||||.|
Sbjct 1069  TTCTGCAATTGACACATGGAGCCCATCAGAATGGCAAATGGCTTATGAACCACAGGGTGGTTCTGGATATGACT  1142

Query 1112  ATTCCTATGCAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCC  1185
            ||||.|||||||||||.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||
Sbjct 1143  ATTCTTATGCAGGGGGCCGTGGCTCATATGGTGATCTTGGCGGACCTATTATCACTACACAAGTAACTATTCCC  1216

Query 1186  AAAGATTTGGCTGGATCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCGGGAGCTTC  1259
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.|||||.||
Sbjct 1217  AAAGATTTGGCTGGATCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATTCGTCATGAATCTGGAGCATC  1290

Query 1260  GATCAAAATTGATGAGCCTTTAGAAGGATCCGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATAC  1333
            .||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1291  AATCAAAATTGATGAACCTTTAGAAGGATCTGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATAC  1364

Query 1334  AGAATGCACAGTATTTGCTGCAGAACAGTGTGAAGCAGTATTCTGGAAAGTTTTTC------------------  1389
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||                  
Sbjct 1365  AGAACGCACAGTATTTGCTGCAGAACAGTGTGAAGCAGTATTCTGGAAAGTTTTTCTAAGACTAGTGAAGAACT  1438

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 1439  GAAGGAGTCCTGCATCTTTTTTTTTTTATCTGCTTCTGTTTAAAAAGCCAACATTCCTCTGCTTCATAGGTGTT  1512

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 1513  CTGCATTTGAGGTGTAGTGAAATCTTTGCTGTTCACCAGATGTAATGTTTTAGTTCCTTACAAACAGGGTTGGG  1586

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 1587  GGGAGGGCATGCAAAAACTAACATTGAAATTTTGAAACAGCAGCAGAGTGAGTGACTTTTATTTTTTGTTCATT  1660

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 1661  GTTGGTGGTTTTAAAAAAAATTCCCCCCATGTAATTATTGTGAACACCTTACTTTGTGGTCACTGTAACATTGG  1734

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 1735  GGGGTGGGACAGGGAGGAAAGTAATAGTCCACATGTCCCTGGCATTTGTTCAGAGCAGTGTGCAGAATGTAATG  1808

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 1809  CTCTTTTGTAAGAAACGTTTTATGATTTTTAAAATAAATTTAGTGAATCTATTTTTGGTGGTCTTTTTTTTTTT  1882

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 1883  TAAGACAATTTCAAATGGTGGTTGAATTTTCCAGCCCACCCCTAAACTAAACACTAAGTTTGATTTTCAGCAGC  1956

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 1957  TCCTCTGTTGGATATAAGTGCACCTCTTGGACATAGACAAAATACATTGGCAAACTCAGTTTGGGTGACTTCTT  2030

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2031  AATGGTTGGAAAGACTTGGCTTGATAAATTTCCATCACATATTCATGCTTATAATAAGCTTGGGATTTTGTTTG  2104

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2105  TTTTTGCAAATGTTTGCCACTACTTTTCAACAGTTTTCTGTTAGTTGTGGAGAACTGCGGTGGGGAGCAATACT  2178

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2179  ACAAGAGTTACGCATCTTAAGTATATGCCAGAAGCCTGATGGGCAATGAGCTTTATTAACCAGAGTAAACTTGG  2252

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2253  TTATGGAAGTGGCTGATGCTGAATAAATCCTGGTTATTTTTGTTAGATAATTTCTCACCTATAGACTTAAAGCT  2326

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2327  GTCAACCTGCTAGTGTCTTGTTAGTTGAACTTTGTAAAAATATATATATATACTTGTTTTTCCATTGTATGCAC  2400

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2401  AATGAAAGAAAAAAGATGTACCATTTCTCTGTTGTGTGTTGAATTATGTAGGAAATGTTTGTGAACGATTCGAA  2474

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2475  AAAAATGGAAAAAGTTCCTGTGGATGTTTTGTGTAGTAACTTGGCATCTGTATTGATAGTTCAAAATCCACATC  2548

Query 1390  --------------------------------------------------------------------------  1389
                                                                                      
Sbjct 2549  TAAATAAAACTTCCATGATGTTAGTTATGACGTGTGCCCAATTTGAAAAGGGGTTGATTAATACATGTAAAGTT  2622

Query 1390  ---------------------------------------------  1389
                                                         
Sbjct 2623  TGTTGAAGTGTTCCTCTTGTAAGGAAATACAGTAATCTTAAATTA  2667

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