Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_06449
Subject:
XM_017313148.1
Aligned Length:
2716
Identities:
930
Gaps:
1625

Alignment

Query    1  ATGCGTCCAATGCGAATTTTTGTGAATGATGACCGCCATGTGATGGCAAAGCATTCTTCCGTTTATCCAACACA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGAGGAGCTGGAGGCAGTCCAGAACATGGTGTCCCACACGGAGCGGGCGCTCAAAGCTGTGTCCGACTGGATAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACGAGCAGGAAAAGGGTAGCAGCGAGCAGGCAGAGTCCGATAACATGGATGTGCCCCCAGAGGACGACAGTAAA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GAAGGGGCTGGGGAACAGAAGACGGAGCACATGACCAGAACCCTGCGGGGAGTGATGCGGGTGGGCCTGGTGGC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AAAGGGCCTCCTACTCAAGGGGGACTTGGATCTGGAGCTGGTGCTGCTGTGTAAGGAGAAGCCCACAACCGCCC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TCCTGGACAAGGTGGCCGACAACCTGGCCATCCAGCTTGCTGCTGTAACAGAAGACAAGTACGAAATACTGCAA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  TCTGTCGACGATGCTGCGATTGTGATAAAAAACACAAAAGAGCCTCCATTGTCCCTGACCATCCACCTGACATC  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  CCCTGTTGTCAGAGAAGAAATGGAGAAAGTATTAGCTGGAGAAACGCTATCAGTCAACGACCCCCCGGACGTTC  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  TGGACAGGCAGAAATGCCTTGCTGCCTTGGCGTCCCTCCGACACGCCAAGTGGTTCCAGGCCAGAGCCAACGGG  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  CTGAAGTCTTGTGTCATTGTGATCCGGGTCTTGAGGGACCTGTGCACTCGCGTGCCCACCTGGGGTCCCCTCCG  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  AGGCTGGCCTCTCGAGCTCCTGTGTGAGAAATCCATTGGCACGGCCAACAGACCGATGGGTGCTGGCGAGGCCC  814
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  815  TGCGGAGAGTGCTGGAGTGCCTGGCGTCGGGCATCGTGATGCCAGATGGTTCTGGCATTTATGACCCTTGTGAA  888
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  889  AAAGAAGCCACTGATGCTATTGGGCATCTAGACAGACAGCAACGGGAAGATATCACACAGAGTGCGCAGCACGC  962
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  963  ACTGCGGCTCGCTGCCTTCGGCCAGCTCCATAAAGTCCTAGGCATGGACCCTCTGCCTTCCAAGATGCCCAAGA  1036
                                                       ||||||||.|||||||||||.||||||||||
Sbjct    1  -------------------------------------------ATGGACCCCCTGCCTTCCAAAATGCCCAAGA  31

Query 1037  AACCAAAGAATGAAAACCCAGTGGACTACACCGTTCAGATCCCACCAAGCACCACCTATGCCATTACGCCCATG  1110
            ||||||||||.||.|||||.|||||||||||.|||||.||.||.||.||||||||||||||.||.||.||||||
Sbjct   32  AACCAAAGAACGAGAACCCGGTGGACTACACTGTTCAAATTCCTCCCAGCACCACCTATGCTATCACACCCATG  105

Query 1111  AAACGCCCAATGGAGGAGGACGGGGAGGAGAAGTCGCCCAGCAAAAAGAAGAAGAAGATTCAGAAGAAAGAGGA  1184
            ||||||||.|||||.|||||.||||||||||||||.||||||||.|||||.||||||||.||||||||||||||
Sbjct  106  AAACGCCCTATGGAAGAGGATGGGGAGGAGAAGTCTCCCAGCAAGAAGAAAAAGAAGATCCAGAAGAAAGAGGA  179

Query 1185  GAAGGCAGAGCCCCCCCAGGCTATGAATGCCCTGATGCGGTTGAACCAGCTGAAGCCAGGGCTGCAGTACAAGC  1258
            ||||||.||.||.||.||.||||||||||||||||||.||||.||.||||||||||||||||||||||||||||
Sbjct  180  GAAGGCTGATCCTCCTCAAGCTATGAATGCCCTGATGAGGTTAAATCAGCTGAAGCCAGGGCTGCAGTACAAGC  253

Query 1259  TGGTGTCCCAGACTGGGCCCGTCCATGCCCCCATCTTTACCATGTCTGTGGAGGTTGATGGCAATTCATTCGAG  1332
            ||.|.||||||||.||.||.||.|||||.||||||||.|||||||||||||||||.||.||||.|...||||||
Sbjct  254  TGATCTCCCAGACAGGCCCTGTTCATGCTCCCATCTTCACCATGTCTGTGGAGGTAGACGGCAGTAACTTCGAG  327

Query 1333  GCCTCTGGGCCCTCCAAAAAGACGGCCAAGCTGCACGTGGCCGTTAAGGTGTTACAGGACATGGGCTTGCCGAC  1406
            |||||.|||||.||.||||||||.||||||||.||.||.||.||.||||||||||||||||||||||||||.||
Sbjct  328  GCCTCGGGGCCATCTAAAAAGACTGCCAAGCTTCATGTAGCTGTGAAGGTGTTACAGGACATGGGCTTGCCAAC  401

Query 1407  GGGTGCTGAAGGCAGGGACTCGAGCAAGGGGGAGGACTCGGCTGAGGAGACCGAGGCGAAGCCAGCAGTGGTGG  1480
            .||.|||||||||||.|||||.|||||||||||.|||||.|||||||||.|.||.|.||||||||||.|.||||
Sbjct  402  AGGCGCTGAAGGCAGAGACTCCAGCAAGGGGGAAGACTCCGCTGAGGAGTCAGATGGGAAGCCAGCAATAGTGG  475

Query 1481  CCCCTGCCCCAGTGGTAGAAGCTGTCTCCACCCCTAGTGCGGCCTTTCCCTCAGATGCCACTGCCGAGAACGTA  1554
            ||||..||||.|||||.|||||||||||||.|||.|||.|.|.|||.||.||||||||||||.|.|        
Sbjct  476  CCCCACCCCCTGTGGTGGAAGCTGTCTCCAACCCCAGTTCTGTCTTCCCTTCAGATGCCACTACTG--------  541

Query 1555  AAACAGCAGGGGCCGATCCTGACAAAGCACGGCAAGAACCCAGTCATGGAGCTGAACGAGAAGAGGCGTGGGCT  1628
                |||||||.|||||..||||.|||||.|||||||||||.||.||||||||.||.||||||||.|||||.||
Sbjct  542  ----AGCAGGGACCGATTTTGACTAAGCATGGCAAGAACCCTGTTATGGAGCTTAATGAGAAGAGACGTGGCCT  611

Query 1629  CAAGTACGAGCTCATCTCCGAGACCGGGGGCAGCCACGACAAGCGCTTCGTCATGGAGGTCGAAGTGGATGGAC  1702
            |||.||.||||||||.||.|||||.|||||||||||||||||..|.||.||.||||||||.||.|||||.||||
Sbjct  612  CAAATATGAGCTCATTTCTGAGACGGGGGGCAGCCACGACAAAAGGTTTGTTATGGAGGTTGAGGTGGACGGAC  685

Query 1703  AGAAGTTCCAAGGTGCTGGTTCCAACAAAAAGGTGGCGAAGGCCTACGCTGCTCTTGCTGCCCTAGAAAAGCTT  1776
            |||||||.||||||||||||||.||||||||||||||.|||||.||.|||||.|||||.||..|||||||.|||
Sbjct  686  AGAAGTTTCAAGGTGCTGGTTCAAACAAAAAGGTGGCAAAGGCTTATGCTGCACTTGCCGCATTAGAAAAACTT  759

Query 1777  TTCCCTGACACCCCTCTCGCCCTTGATGCCAACAAAAAGAAGAGAGCCCCAGTACCCGTCAGAGGGGGACCGAA  1850
            ||||||||.||||||||.||.|||||.||||||||||||||.||..||||||||||.|||.||||.|||||.||
Sbjct  760  TTCCCTGATACCCCTCTTGCTCTTGAAGCCAACAAAAAGAAAAGGACCCCAGTACCTGTCCGAGGTGGACCCAA  833

Query 1851  ATTTGCTGCTAAGCCACATAACCCTGGCTTCGGCATGGGAGGCCCCATGCACAACGAAGTGCCCCCACCCCCCA  1924
            |||||||||.||||||||.||||||||.||.||||||||||||||||||||.||.||||||||.|||||.||.|
Sbjct  834  ATTTGCTGCCAAGCCACACAACCCTGGTTTTGGCATGGGAGGCCCCATGCATAATGAAGTGCCGCCACCTCCTA  907

Query 1925  ACCTTCGAGGGCGGGGAAGAGGCGGGAGCATCCGGGGACGAGGGCGCGGGCGAGGATTTGGTGGCGCCAACCAT  1998
            ||.|.|||||.|||||..||||.||.|.||||||.||.|||||.||.|||||||||||||||||||||||||||
Sbjct  908  ACATCCGAGGTCGGGGCCGAGGAGGTAACATCCGAGGGCGAGGACGGGGGCGAGGATTTGGTGGCGCCAACCAT  981

Query 1999  ---GGAGGCTACATGAATGCCGGTGCTGGGTATGGAAGCTATGGGTACGGAGGCAACTCTGCGACAGCAGGCTA  2069
               |||||||||||||||||.||||||||.||||||||||||||||||.|..||||.||.||.|||||||||||
Sbjct  982  GGAGGAGGCTACATGAATGCTGGTGCTGGATATGGAAGCTATGGGTACAGCAGCAATTCGGCCACAGCAGGCTA  1055

Query 2070  CAGTGACTTTTTCACAG-ACTGCTACGGCTATCATGATTTTGGGTCTTCC------------------------  2118
            ||||.|.||.|  |||| |.|| .|.|||       |||.||||..|.||                        
Sbjct 1056  CAGTCAGTTCT--ACAGCAATG-GAGGGC-------ATTCTGGGAATGCCGGTGGTGGAGGCAGCGGGGGAGGT  1119

Query 2119  --------------------------------------------------------------------------  2118
                                                                                      
Sbjct 1120  GGTGGCTCATCCAGCTACAGCTCCTACTACCAAGGAGACAGCTACAACTCACCAGTACCCCCGAAGCATGCTGG  1193

Query 2119  --------------------------------------------------------------------------  2118
                                                                                      
Sbjct 1194  GAAGAAGCCGCTGCATGGGGGCCAGCAGAAAGCCTCCTACAGCTCGGGCTACCAGTCCCACCAGGGCCAGCAGC  1267

Query 2119  --------------------------------------------------------------------------  2118
                                                                                      
Sbjct 1268  AACCTTACAACCAGAGCCAGTACAGCAGCTACGGCACGCCACAGGGCAAGCAGAAAGGCTATGGCCATGGGCAG  1341

Query 2119  --------------------------------------------------------------------------  2118
                                                                                      
Sbjct 1342  GGCAGCTACTCCTCCTACTCCAACTCTTACAACTCCCCAGGTGGTGGTGGGGGCTCTGACTACAGCTACGACAG  1415

Query 2119  --------------------------------------------------------------------------  2118
                                                                                      
Sbjct 1416  CAAATTCAACTACAGTGGGAGTGGAGGCCGGAGTGGAGGCAACAGCTATGGCTCCAGCGGGTCATCGTCCTACA  1489

Query 2119  --------------------------------------------------------------------------  2118
                                                                                      
Sbjct 1490  ACACAGGCTCACATGGAGGCTATGGCACAGGCTCCGGAGGCAGCTCTTCATACCAAGGCAAACAAGGAGGCTAC  1563

Query 2119  --------------------------------------------------------------------------  2118
                                                                                      
Sbjct 1564  TCATCACAGTCAAACTACAGCTCACCTGGGTCCAGCCAGAGCTACAGTGGTCCTGCCAGCTCCTACCAGTCCTC  1637

Query 2119  ----------------------------------------------------  2118
                                                                
Sbjct 1638  ACAGGGTGGCTACAGTCGGAACACAGAGCACAGCATGAACTACCAGTACAGA  1689

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