Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06449
- Subject:
- XM_017313148.1
- Aligned Length:
- 2716
- Identities:
- 930
- Gaps:
- 1625
Alignment
Query 1 ATGCGTCCAATGCGAATTTTTGTGAATGATGACCGCCATGTGATGGCAAAGCATTCTTCCGTTTATCCAACACA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGAGGAGCTGGAGGCAGTCCAGAACATGGTGTCCCACACGGAGCGGGCGCTCAAAGCTGTGTCCGACTGGATAG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ACGAGCAGGAAAAGGGTAGCAGCGAGCAGGCAGAGTCCGATAACATGGATGTGCCCCCAGAGGACGACAGTAAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAAGGGGCTGGGGAACAGAAGACGGAGCACATGACCAGAACCCTGCGGGGAGTGATGCGGGTGGGCCTGGTGGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AAAGGGCCTCCTACTCAAGGGGGACTTGGATCTGGAGCTGGTGCTGCTGTGTAAGGAGAAGCCCACAACCGCCC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TCCTGGACAAGGTGGCCGACAACCTGGCCATCCAGCTTGCTGCTGTAACAGAAGACAAGTACGAAATACTGCAA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TCTGTCGACGATGCTGCGATTGTGATAAAAAACACAAAAGAGCCTCCATTGTCCCTGACCATCCACCTGACATC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CCCTGTTGTCAGAGAAGAAATGGAGAAAGTATTAGCTGGAGAAACGCTATCAGTCAACGACCCCCCGGACGTTC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 TGGACAGGCAGAAATGCCTTGCTGCCTTGGCGTCCCTCCGACACGCCAAGTGGTTCCAGGCCAGAGCCAACGGG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CTGAAGTCTTGTGTCATTGTGATCCGGGTCTTGAGGGACCTGTGCACTCGCGTGCCCACCTGGGGTCCCCTCCG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 AGGCTGGCCTCTCGAGCTCCTGTGTGAGAAATCCATTGGCACGGCCAACAGACCGATGGGTGCTGGCGAGGCCC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TGCGGAGAGTGCTGGAGTGCCTGGCGTCGGGCATCGTGATGCCAGATGGTTCTGGCATTTATGACCCTTGTGAA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 AAAGAAGCCACTGATGCTATTGGGCATCTAGACAGACAGCAACGGGAAGATATCACACAGAGTGCGCAGCACGC 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 ACTGCGGCTCGCTGCCTTCGGCCAGCTCCATAAAGTCCTAGGCATGGACCCTCTGCCTTCCAAGATGCCCAAGA 1036
||||||||.|||||||||||.||||||||||
Sbjct 1 -------------------------------------------ATGGACCCCCTGCCTTCCAAAATGCCCAAGA 31
Query 1037 AACCAAAGAATGAAAACCCAGTGGACTACACCGTTCAGATCCCACCAAGCACCACCTATGCCATTACGCCCATG 1110
||||||||||.||.|||||.|||||||||||.|||||.||.||.||.||||||||||||||.||.||.||||||
Sbjct 32 AACCAAAGAACGAGAACCCGGTGGACTACACTGTTCAAATTCCTCCCAGCACCACCTATGCTATCACACCCATG 105
Query 1111 AAACGCCCAATGGAGGAGGACGGGGAGGAGAAGTCGCCCAGCAAAAAGAAGAAGAAGATTCAGAAGAAAGAGGA 1184
||||||||.|||||.|||||.||||||||||||||.||||||||.|||||.||||||||.||||||||||||||
Sbjct 106 AAACGCCCTATGGAAGAGGATGGGGAGGAGAAGTCTCCCAGCAAGAAGAAAAAGAAGATCCAGAAGAAAGAGGA 179
Query 1185 GAAGGCAGAGCCCCCCCAGGCTATGAATGCCCTGATGCGGTTGAACCAGCTGAAGCCAGGGCTGCAGTACAAGC 1258
||||||.||.||.||.||.||||||||||||||||||.||||.||.||||||||||||||||||||||||||||
Sbjct 180 GAAGGCTGATCCTCCTCAAGCTATGAATGCCCTGATGAGGTTAAATCAGCTGAAGCCAGGGCTGCAGTACAAGC 253
Query 1259 TGGTGTCCCAGACTGGGCCCGTCCATGCCCCCATCTTTACCATGTCTGTGGAGGTTGATGGCAATTCATTCGAG 1332
||.|.||||||||.||.||.||.|||||.||||||||.|||||||||||||||||.||.||||.|...||||||
Sbjct 254 TGATCTCCCAGACAGGCCCTGTTCATGCTCCCATCTTCACCATGTCTGTGGAGGTAGACGGCAGTAACTTCGAG 327
Query 1333 GCCTCTGGGCCCTCCAAAAAGACGGCCAAGCTGCACGTGGCCGTTAAGGTGTTACAGGACATGGGCTTGCCGAC 1406
|||||.|||||.||.||||||||.||||||||.||.||.||.||.||||||||||||||||||||||||||.||
Sbjct 328 GCCTCGGGGCCATCTAAAAAGACTGCCAAGCTTCATGTAGCTGTGAAGGTGTTACAGGACATGGGCTTGCCAAC 401
Query 1407 GGGTGCTGAAGGCAGGGACTCGAGCAAGGGGGAGGACTCGGCTGAGGAGACCGAGGCGAAGCCAGCAGTGGTGG 1480
.||.|||||||||||.|||||.|||||||||||.|||||.|||||||||.|.||.|.||||||||||.|.||||
Sbjct 402 AGGCGCTGAAGGCAGAGACTCCAGCAAGGGGGAAGACTCCGCTGAGGAGTCAGATGGGAAGCCAGCAATAGTGG 475
Query 1481 CCCCTGCCCCAGTGGTAGAAGCTGTCTCCACCCCTAGTGCGGCCTTTCCCTCAGATGCCACTGCCGAGAACGTA 1554
||||..||||.|||||.|||||||||||||.|||.|||.|.|.|||.||.||||||||||||.|.|
Sbjct 476 CCCCACCCCCTGTGGTGGAAGCTGTCTCCAACCCCAGTTCTGTCTTCCCTTCAGATGCCACTACTG-------- 541
Query 1555 AAACAGCAGGGGCCGATCCTGACAAAGCACGGCAAGAACCCAGTCATGGAGCTGAACGAGAAGAGGCGTGGGCT 1628
|||||||.|||||..||||.|||||.|||||||||||.||.||||||||.||.||||||||.|||||.||
Sbjct 542 ----AGCAGGGACCGATTTTGACTAAGCATGGCAAGAACCCTGTTATGGAGCTTAATGAGAAGAGACGTGGCCT 611
Query 1629 CAAGTACGAGCTCATCTCCGAGACCGGGGGCAGCCACGACAAGCGCTTCGTCATGGAGGTCGAAGTGGATGGAC 1702
|||.||.||||||||.||.|||||.|||||||||||||||||..|.||.||.||||||||.||.|||||.||||
Sbjct 612 CAAATATGAGCTCATTTCTGAGACGGGGGGCAGCCACGACAAAAGGTTTGTTATGGAGGTTGAGGTGGACGGAC 685
Query 1703 AGAAGTTCCAAGGTGCTGGTTCCAACAAAAAGGTGGCGAAGGCCTACGCTGCTCTTGCTGCCCTAGAAAAGCTT 1776
|||||||.||||||||||||||.||||||||||||||.|||||.||.|||||.|||||.||..|||||||.|||
Sbjct 686 AGAAGTTTCAAGGTGCTGGTTCAAACAAAAAGGTGGCAAAGGCTTATGCTGCACTTGCCGCATTAGAAAAACTT 759
Query 1777 TTCCCTGACACCCCTCTCGCCCTTGATGCCAACAAAAAGAAGAGAGCCCCAGTACCCGTCAGAGGGGGACCGAA 1850
||||||||.||||||||.||.|||||.||||||||||||||.||..||||||||||.|||.||||.|||||.||
Sbjct 760 TTCCCTGATACCCCTCTTGCTCTTGAAGCCAACAAAAAGAAAAGGACCCCAGTACCTGTCCGAGGTGGACCCAA 833
Query 1851 ATTTGCTGCTAAGCCACATAACCCTGGCTTCGGCATGGGAGGCCCCATGCACAACGAAGTGCCCCCACCCCCCA 1924
|||||||||.||||||||.||||||||.||.||||||||||||||||||||.||.||||||||.|||||.||.|
Sbjct 834 ATTTGCTGCCAAGCCACACAACCCTGGTTTTGGCATGGGAGGCCCCATGCATAATGAAGTGCCGCCACCTCCTA 907
Query 1925 ACCTTCGAGGGCGGGGAAGAGGCGGGAGCATCCGGGGACGAGGGCGCGGGCGAGGATTTGGTGGCGCCAACCAT 1998
||.|.|||||.|||||..||||.||.|.||||||.||.|||||.||.|||||||||||||||||||||||||||
Sbjct 908 ACATCCGAGGTCGGGGCCGAGGAGGTAACATCCGAGGGCGAGGACGGGGGCGAGGATTTGGTGGCGCCAACCAT 981
Query 1999 ---GGAGGCTACATGAATGCCGGTGCTGGGTATGGAAGCTATGGGTACGGAGGCAACTCTGCGACAGCAGGCTA 2069
|||||||||||||||||.||||||||.||||||||||||||||||.|..||||.||.||.|||||||||||
Sbjct 982 GGAGGAGGCTACATGAATGCTGGTGCTGGATATGGAAGCTATGGGTACAGCAGCAATTCGGCCACAGCAGGCTA 1055
Query 2070 CAGTGACTTTTTCACAG-ACTGCTACGGCTATCATGATTTTGGGTCTTCC------------------------ 2118
||||.|.||.| |||| |.|| .|.||| |||.||||..|.||
Sbjct 1056 CAGTCAGTTCT--ACAGCAATG-GAGGGC-------ATTCTGGGAATGCCGGTGGTGGAGGCAGCGGGGGAGGT 1119
Query 2119 -------------------------------------------------------------------------- 2118
Sbjct 1120 GGTGGCTCATCCAGCTACAGCTCCTACTACCAAGGAGACAGCTACAACTCACCAGTACCCCCGAAGCATGCTGG 1193
Query 2119 -------------------------------------------------------------------------- 2118
Sbjct 1194 GAAGAAGCCGCTGCATGGGGGCCAGCAGAAAGCCTCCTACAGCTCGGGCTACCAGTCCCACCAGGGCCAGCAGC 1267
Query 2119 -------------------------------------------------------------------------- 2118
Sbjct 1268 AACCTTACAACCAGAGCCAGTACAGCAGCTACGGCACGCCACAGGGCAAGCAGAAAGGCTATGGCCATGGGCAG 1341
Query 2119 -------------------------------------------------------------------------- 2118
Sbjct 1342 GGCAGCTACTCCTCCTACTCCAACTCTTACAACTCCCCAGGTGGTGGTGGGGGCTCTGACTACAGCTACGACAG 1415
Query 2119 -------------------------------------------------------------------------- 2118
Sbjct 1416 CAAATTCAACTACAGTGGGAGTGGAGGCCGGAGTGGAGGCAACAGCTATGGCTCCAGCGGGTCATCGTCCTACA 1489
Query 2119 -------------------------------------------------------------------------- 2118
Sbjct 1490 ACACAGGCTCACATGGAGGCTATGGCACAGGCTCCGGAGGCAGCTCTTCATACCAAGGCAAACAAGGAGGCTAC 1563
Query 2119 -------------------------------------------------------------------------- 2118
Sbjct 1564 TCATCACAGTCAAACTACAGCTCACCTGGGTCCAGCCAGAGCTACAGTGGTCCTGCCAGCTCCTACCAGTCCTC 1637
Query 2119 ---------------------------------------------------- 2118
Sbjct 1638 ACAGGGTGGCTACAGTCGGAACACAGAGCACAGCATGAACTACCAGTACAGA 1689
