Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_06549
• Subject: XM_017025746.2
• Aligned Length: 1315
• Identities: 968
• Gaps: 44

Alignment

Query    1  ATGTCGTCCATCCTGCCTTTCACTCCCCCGATCGTGAAGCGCCTGCTGGGCTGGAAGAAG--------------  60
            ||||||||||||.||||.|||||.||.||..|.||||||.|.||||||||.|||||||||              
Sbjct    1  ATGTCGTCCATCTTGCCATTCACGCCGCCAGTTGTGAAGAGACTGCTGGGATGGAAGAAGTCAGCTGGTGGGTC  74

Query   61  ----------------GGCGAGCAGAACGGGCAGGAGGAGAAATGGTGCGAGAAGGCGGTCAAGAGCCTGGTCA  118
                            ||.||||||||.||||||||.||.||.|||||.|||||.||.||.||.||.|||||.|
Sbjct   75  TGGAGGAGCAGGCGGAGGAGAGCAGAATGGGCAGGAAGAAAAGTGGTGTGAGAAAGCAGTGAAAAGTCTGGTGA  148

Query  119  AGAAACTCAAGAAGACGGGGCAGCTGGACGAGCTGGAGAAGGCCATCACCACGCAGAAC-GTCAACACCAAGTG  191
            ||||.||.|||||.||.||.|...|.||.|||||.|||||.|||||||||||.||.||| || ||.||.||.||
Sbjct  149  AGAAGCTAAAGAAAACAGGACGATTAGATGAGCTTGAGAAAGCCATCACCACTCAAAACTGT-AATACTAAATG  221

Query  192  CATCACCATCCCCAGGTCCCTGGATGGCCGGTTGCAGGTGTCCCATCGGAAGGGGCTCCCTCATGTCATCTACT  265
            ..|.|||||.||.|||||.||.|||||.||..|.|||||.||||||||.||.||..|.||.|||||.||.||.|
Sbjct  222  TGTTACCATACCAAGGTCTCTTGATGGTCGTCTCCAGGTATCCCATCGAAAAGGATTGCCACATGTTATATATT  295

Query  266  GCCGCCTGTGGCGATGGCCAGACCTGCACAGCCACCACGAGCTGCGGGCCATGGAGCTGTGTGAGTTCGCCTTC  339
            ||||..|.|||||.|||||.||.||.|||||.||.||.||.||...|||.||.||....||.||.|..||.||.
Sbjct  296  GCCGATTATGGCGCTGGCCTGATCTTCACAGTCATCATGAACTCAAGGCAATTGAAAACTGCGAATATGCTTTT  369

Query  340  AATATGAAGAAGGACGAGGTCTGCGTGAATCCCTACCACTACCAGAGAGTAGAGACACCAGTTCTACCTCCTGT  413
            |||.|.||.|||||.||.||.||.||.||.||.||||||||.||||||||.||||||||||||.|.|||||.||
Sbjct  370  AATCTTAAAAAGGATGAAGTATGTGTAAACCCTTACCACTATCAGAGAGTTGAGACACCAGTTTTGCCTCCAGT  443

Query  414  GTTGGTGCCACGCCACACAGAGATCCCGGCCGAGTTCCCCCCACTGGACGACTACAGCCATTCCATCCCCGAAA  487
            .||.|||||.||.|||||.|||||||...|.||..|.||.||.|||||.|||||.|..||.|||||.||.||||
Sbjct  444  ATTAGTGCCCCGACACACCGAGATCCTAACAGAACTTCCGCCTCTGGATGACTATACTCACTCCATTCCAGAAA  517

Query  488  ACACTAACTTCCCCGCAGGCATCGAGCCCCAGAGCA---ATATTCCAGAGACCCCACCCCCTGGCTACCTGAGT  558
            |||||||||||||.|||||.||.|||||.|||||.|   ||||||||||.||.|||||.|||||.||..|.|||
Sbjct  518  ACACTAACTTCCCAGCAGGAATTGAGCCACAGAGTAATTATATTCCAGAAACGCCACCTCCTGGATATATCAGT  591

Query  559  GAAGATGGAGAAACCAGTGACCACCAGATGAACCACAGCATGGACGCAGGTTCTCCA----AACCTATCCCCGA  628
            ||||||||||||||.||||||||.|||.||||.||.||.||||||.||||.||||||    || |||||.||.|
Sbjct  592  GAAGATGGAGAAACAAGTGACCAACAGTTGAATCAAAGTATGGACACAGGCTCTCCAGCAGAA-CTATCTCCTA  664

Query  629  ATCCGATGTCCCCAGCACATAATAACTTGGACCTGCAGCCAGTTACCTACTGCGAGCCGGCCTTCTGGTGCTCC  702
            .|.|..|.|||||.|...||.|||.||||||..|.|||||||||||.||||..||.||.||.||.|||||.||.
Sbjct  665  CTACTCTTTCCCCTGTTAATCATAGCTTGGATTTACAGCCAGTTACTTACTCAGAACCTGCATTTTGGTGTTCG  738

Query  703  ATCTCCTACTACGAGCTGAACCAGCGCGTCGGGGAGACATTCCACGCCTCGCAGCCATCCATGACTGTGGATGG  776
            ||..|.||.||.||..|.||.|||.|.||.||.||.||.|||||.||.||.|||||.||..|.|||||.|||||
Sbjct  739  ATAGCATATTATGAATTAAATCAGAGGGTTGGAGAAACCTTCCATGCATCACAGCCCTCACTCACTGTAGATGG  812

Query  777  CTTCACCGACCCCTCCAATTCGGAGCGCTTCTGCCTAGGGCTGCTCTCCAATGTCAACAGGAATGCAGCAGTGG  850
            |||.||.|||||.||.|||||.|||.|.||||||.||||..|.|||||||||||.|||.|.|||||..|.||.|
Sbjct  813  CTTTACAGACCCATCAAATTCAGAGAGGTTCTGCTTAGGTTTACTCTCCAATGTTAACCGAAATGCCACGGTAG  886

Query  851  AGCTGACACGGAGACACATCGGAAGAGGCGTGCGGCTCTACTACATCGGAGGGGAGGTCTTCGCAGAGTGCCTC  924
            |..|||||.|.||.||.||.||||||||.|||||..|.||||||||.||.|||||.||.||.||.||||||||.
Sbjct  887  AAATGACAAGAAGGCATATAGGAAGAGGAGTGCGCTTATACTACATAGGTGGGGAAGTTTTTGCTGAGTGCCTA  960

Query  925  AGTGACAGCGCTATTTTTGTCCAGTCTCCCAACTGTAACCAGCGCTATGGCTGGCACCCGGCCACCGTCTGCAA  998
            |||||.||.||.||.|||||.|||...|||||.|||||.|||.|.||||||||||||||.||.||.||.||.||
Sbjct  961  AGTGATAGTGCAATCTTTGTGCAGAGCCCCAATTGTAATCAGAGATATGGCTGGCACCCTGCAACAGTGTGTAA  1034

Query  999  GATCCCACCAGGATGCAACCTGAAGATCTTCAACAACCAGGAGTTCGCTGCCCTCCTGGCCCAGTCGGTCAACC  1072
            .||.||||||||.||.||.|||||||||||||||||||||||.||.|||||.||.|||||.|||||.||.||.|
Sbjct 1035  AATTCCACCAGGCTGTAATCTGAAGATCTTCAACAACCAGGAATTTGCTGCTCTTCTGGCTCAGTCTGTTAATC  1108

Query 1073  AGGGCTTTGAGGCTGTCTACCAGTTGACCCGAATGTGCACCATCCGCATGAGCTTCGTCAAAGGCTGGGGAGCG  1146
            ||||.|||||.||.|||||.|||.|.||..|||||||||||||..|.|||||.||.||.|||||.||||||||.
Sbjct 1109  AGGGTTTTGAAGCCGTCTATCAGCTAACTAGAATGTGCACCATAAGAATGAGTTTTGTGAAAGGGTGGGGAGCA  1182

Query 1147  GAGTACAGGAGACAGACTGTGACCAGTACCCCCTGCTGGATTGAGCTGCACCTGAATGGGCCTTTGCAGTGGCT  1220
            ||.|||.|.||.|||||.||.||.|||||.||.|||||||||||.||.||.||||||||.|||.|.||||||.|
Sbjct 1183  GAATACCGAAGGCAGACGGTAACAAGTACTCCTTGCTGGATTGAACTTCATCTGAATGGACCTCTACAGTGGTT  1256

Query 1221  TGACAAGGTCCTCACCCAGATGGGCTCCCC--AAGCATCCGCTGTTCCAGTGTGTCT  1275
            .|||||.||..|.||.||||||||.|||||  .||  |.||.||.||.||..||||.
Sbjct 1257  GGACAAAGTATTAACTCAGATGGGATCCCCTTCAG--TGCGTTGCTCAAGCATGTCA  1311