Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06564
- Subject:
- XR_381483.3
- Aligned Length:
- 2191
- Identities:
- 368
- Gaps:
- 1797
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGATTTGTAGTTTCTCTGGCTCTCTCTCACTCGCCCATCCGACGCTCGAGGACTACAAGTCTCAGCTACCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCGCGGTGAGCCCGGTCACGTGTTAGGGGGCCGATCGGGCGTGCGTGCCGCCGTTGATCCGGTGCTGCAGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGTGGTTGTCGCCCGTGTTGTGTGTGCGTGAGTGTGTGTGAGTGAGTGAGCGAGTGAGTGAGTGTGTGCGTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCACTCGGCTTGTTGTTGTCGGTGACTTCCCCCTTCCCTCCACCCCTCCCCTCCCCGGCCGCCGCTGCAGTG 296
Query 1 ----------------------ATGAGCGATAACGATGACATCGAGGTGGAGAGCGACGAAGAGCAACAGAGGT 52
||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 297 GCCGCTCCCTGGGCCGTAGGAAATGAGCGATAACGATGACATCGAGGTGGAGAGCGACGAAGAGCAACCGAGGT 370
Query 53 TTCAATCTGCGGCTGACAAACGGGCTCATCATAATGCACTGGAACGAAAACGTAGGGACCACATCAAAGACAGC 126
|||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTCAATCTGCGGCTGACAAGCGGGCTCACCATAATGCACTGGAACGAAAACGTAGGGACCACATCAAAGACAGC 444
Query 127 TTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGGAGAGAAGGCATCCCGGGCCCAAATCCTAGACAAAGC 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGGAGAGAAGGCATCCCGGGCCCAAATCCTAGACAAAGC 518
Query 201 CACAGAATATATCCAGTATATGCGAAGGAAAAACCACACACACCAGCAAGATATTGACGACCTCAAGCGGCAGA 274
.|||||.|||||||||||||||||||||||||||||.||.|||||||||||.|||||.||||||||||||||||
Sbjct 519 AACAGAGTATATCCAGTATATGCGAAGGAAAAACCATACGCACCAGCAAGACATTGATGACCTCAAGCGGCAGA 592
Query 275 ATGCTCTTCTGGAGCAGCAAGGTGAGCACCCGAGC----------------TCGTGGG---------------- 316
||||||||||||||||.|||||.||...|..|||| ||.||||
Sbjct 593 ATGCTCTTCTGGAGCAACAAGGGGAAAGCGAGAGCTGATCAAGTTCTTTGTTCCTGGGGAATTCACTTCTCTTC 666
Query 317 -------------------------------------GCAGCTG------------------GCCCTGCTG--- 332
||| ||| ||||..|||
Sbjct 667 CTCCCTCATGGAAGATGCAAGTAAAAGGAAATTCCGTGCA-CTGGAGAAGGCAAGATCAAGTGCCCAACTGCAG 739
Query 333 ------------TGCTC------CAGCC---------------AGG-----------TCAGGCTT---TGG--- 356
|.||| ||||| ||| ||.|.||| |||
Sbjct 740 ACCAACTACCCCTCCTCAGACAACAGCCTCTACACCAACGCCAAGGGCGGCACCATCTCTGCCTTCGATGGGGG 813
Query 357 ---------CACCT--------GGGCCTGCAGAG--TCAGAGCCAG--------TC---ATGGAGTATGTGCTC 400
||.|| |.|||||.|||| .||||| ||| || |||||| || |
Sbjct 814 TTCAGACTCCAGCTCAGAATCCGAGCCTGAAGAGCCCCAGAG-CAGGAAGAAACTCCGGATGGAG-----GC-C 880
Query 401 AG------------------------------------------------------------------------ 402
||
Sbjct 881 AGCTAAGCCATGCGGGGCAGGCCAGCAATAAAACTGTCGACTCTCTCGTCGCATCCTCCTTCTGTTCATCATTA 954
Query 403 -------------------------------------------------------------------------- 402
Sbjct 955 GAACCCTCAGAACCATTGAGAAGACTCTTTATTTTCCTTTTCTCTTTATTAATTGTTATTTTTGCATAGAAGCT 1028
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1029 CTTGGACAACAGCTCTCATCCCCTTCCCTGTGTCCACTATTTTTAAATGTATTCCCTTCAGGGGTTCCTGTCCC 1102
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1103 CACCAGAAATTTTAAACCAAAACACCCCAACTTGGCAGCTCTTTCTGTGGAGGACAGACGGCCGGCCAGACCTC 1176
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1177 TGAGTACACGGTGTCCTGCCCACCCTACCAGCTCCTCCAGCCCTCAGAGCACGTGCCTGGAGGACGCCTGCTCT 1250
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1251 ACCAGGCTCTCCTCCCAGTCCTCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCTTTGGCA 1324
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1325 AGAAGACCTGATTGGAGTAATCAGAACTCACTCCCTCCTTTGTAAGGATTATTTTTTTGGAAAAGCTGTCTCTC 1398
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1399 CTGTTGAAAGACGGGATTCTTGAAGAAGTTTGTGTGGTAGAAAAGGAAAGTGGGGACAGATTTGCAGCACCCAT 1472
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1473 GGCACAGTCTGTAACTTCGGCTGTTTAAGCCTGAAGACCCAGCCTTCCAGAAGGCCACGGGACGCTGGTATGTA 1546
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1547 TGTATAGGAGACGGCGGCAGTGAAACGAACGGCTCTCAGGAGTGGGGGTGGCTATGTGGGTGGGGCTGGGAGGG 1620
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1621 AGTCTTAGGTGGGGTAGAGGTTTTGTATTAAGGGCCAGTGATGATGTTTTGATATTTATTTCCTGCTACTGAAA 1694
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1695 TTTGAATCTGAATGAAATGCCCCCTATTTCTGATGATGTCGATATTGTAAAGCGACAGATTCATAAAGTAATGA 1768
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1769 TCAAATCTTCATTTCTTTCTGTGTGTATTTCTAAGAAATAGAGCCAACTATTTTGTATGTAAATACCAAGAGCG 1842
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1843 ACTTACCTGGTACTAAACCCACAGCCCAGTCCAGCCTCCCGCCCTGCTTCTTTCCTCCTGTCCTGGAACTTGTC 1916
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1917 GCCACTGTGTGATCCAGTCCTGGCTCTGGCTGTGGTCAGCAGATCCCAGTGAAGGGTTTCTTGTCTTGATGCTT 1990
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1991 CATTTCTTTGTCTTTTTCCTACTCTGTTGCCGGCATTTGCTGATTTCTAGTGTATACTTTGTAGTCTCAGTCGG 2064
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2065 TGTTGATTCCATTCCATGGAAATAAAGAGTATGTTGTACATACTGCCCAAGAATTGTCCTGCAAGTTAAGGCTT 2138
Query 403 --------------------------------------------- 402
Sbjct 2139 CCCCCTTTACTATAAGAATATAAATAAAAACTTATTTTATCCTTG 2183
