Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_06700
Subject:
XM_006505734.1
Aligned Length:
2315
Identities:
1657
Gaps:
430

Alignment

Query    1  ---ATGGAGTC--GC--CAACAAAG-GAGATTGAAGAA---TTTGAGAGCAACTCTCTGAAAT-----------  52
               |.|||..|  ||  |||.|||| |.|.||.|||||   |..|||.||.|||.||.| .||           
Sbjct    1  ATGACGGACACCAGCCACAAGAAAGAGGGCTTCAAGAAATGTAGGAGCGCCACTTTCAG-CATCGACGGGTACA  73

Query   53  -----ACC-----TGCAACCGGAACAGATCGAGAAAA----------------TCTGGCTT----CGG------  90
                 |||     |||||..|.|.|||   ||||.||                .||.||||    |||      
Sbjct   74  GCTTCACCATCGTTGCAAATGAAGCAG---GAGACAAGAATGCCAGACCACTTGCTCGCTTCTCCCGGTCTAAG  144

Query   91  --------------------CTCCGC--------GGGCTGA--GGAAATAT-----------------------  111
                                |||| |        |||||.|  ||.|||||                       
Sbjct  145  TCACAGAACTGCCTGTGGAACTCC-CTCATTGATGGGCTCACTGGGAATATTAAGGAGAAACCACGGCCAACAA  217

Query  112  ------------------------AAGAAA------------ACGT----------------CCCAG-------  126
                                    ||||||            | ||                |||||       
Sbjct  218  TTGTCCAGGACACGCGACCCCCAGAAGAAATTCTGGCAGATGA-GTTGCCACAGCTGGATAGCCCAGAAGCTTT  290

Query  127  ----------------AGATTACGGTCTTTGGTCAAACAATTAGAGAGAGGGGAAGCTTCAGTGGTAGATCTTA  184
                            ||.|||||||||||||||||.||||||||..||||.||.||.||.||||||||.||||
Sbjct  291  GGTGAAGACATCTTTCAGGTTACGGTCTTTGGTCAAGCAATTAGAACGAGGAGAGGCCTCTGTGGTAGACCTTA  364

Query  185  AGAAGAATTTGGAATATGCAGCCACAGTGCTTGAATCTGTGTATATTGATGAAACAAGGAGACTCCTGGATACA  258
            ||||||||.|||||||||||||||||||||||||||||||.||||||||||||||||||.||||.|||||||||
Sbjct  365  AGAAGAATCTGGAATATGCAGCCACAGTGCTTGAATCTGTATATATTGATGAAACAAGGCGACTGCTGGATACA  438

Query  259  GAGGATGAGCTCAGTGACATTCAGTCAGATGCTGTGCCTTCTGAGGTCCGAGACTGGCTGGCCTCCACCTTCAC  332
            |||||||||||.|||||||||||.|||||||||||||||||.||.||.||.||.||||||||||||||||||||
Sbjct  439  GAGGATGAGCTTAGTGACATTCAATCAGATGCTGTGCCTTCAGAAGTTCGGGATTGGCTGGCCTCCACCTTCAC  512

Query  333  GCGGCAGATGGGGATGATGCTCAGGAGGAGCGACGAGAAGCCCCGGTTCAAGAGCATCGTTCACGCAGTGCAGG  406
            .||||||||||||||||||||.|||||.||.||.|||||||||.||||||||||||||||.||.||.|||||.|
Sbjct  513  ACGGCAGATGGGGATGATGCTTAGGAGAAGTGATGAGAAGCCCAGGTTCAAGAGCATCGTCCATGCGGTGCAAG  586

Query  407  CTGGGATATTTGTGGAGAGAATGTATAGACGGACATCAAACATGGTTGGACTGAGCTATCCACCAGCTGTTATT  480
            ||||||||||||||||.||||||||.|||||||||||||||||||||||.||||||||||||||.|||||.||.
Sbjct  587  CTGGGATATTTGTGGAAAGAATGTACAGACGGACATCAAACATGGTTGGGCTGAGCTATCCACCGGCTGTAATC  660

Query  481  GAGGCATTAAAGGATGTGGACAAGTGGTCATTTGACGTCTTTTCCCTCAATGAGGCCAGTGGGGATCATGCACT  554
            ||.|||||.|||||||||||.|.||||||.||.||.||||||||||||||||||||||||||.|||||||||||
Sbjct  661  GATGCATTGAAGGATGTGGATACGTGGTCCTTCGATGTCTTTTCCCTCAATGAGGCCAGTGGAGATCATGCACT  734

Query  555  GAAATTTATTTTCTATGAACTACTCACACGTTATGATCTGATCAGCCGTTTCAAGATCCCCATTTCTGCACTTG  628
            |||.||.||||||||||||.||||||||||||||||.||||||||||||||.|||||.||.|||||||||||||
Sbjct  735  GAAGTTCATTTTCTATGAATTACTCACACGTTATGACCTGATCAGCCGTTTTAAGATACCGATTTCTGCACTTG  808

Query  629  TCTCATTTGTGGAGGCCCTGGAAGTGGGATACAGCAAGCACAAAAATCCTTACCATAACTTAATGCACGCTGCC  702
            |||||||||||||||||||.||||||||.||||||||||||||||||||||||||||||.|.|||||.||.||.
Sbjct  809  TCTCATTTGTGGAGGCCCTCGAAGTGGGTTACAGCAAGCACAAAAATCCTTACCATAACCTGATGCATGCAGCT  882

Query  703  GATGTTACACAGACAGTGCATTACCTCCTCTATAAGACAGGAGTGGCGAACTGGCTGACGGAGCTGGAGATCTT  776
            ||.||.||||||||.||||||||||||||.||||||||||||||.||.|||||||||||.||||||||||||||
Sbjct  883  GACGTCACACAGACTGTGCATTACCTCCTTTATAAGACAGGAGTAGCAAACTGGCTGACAGAGCTGGAGATCTT  956

Query  777  TGCTATAATCTTCTCAGCTGCCATCCATGACTACGAGCATACCGGAACCACCAACAATTTCCACATTCAGACTC  850
            |||.||||||||.||.|||||||||||||||||.||.|||||.|||||.||.||||||||||||||||||||||
Sbjct  957  TGCAATAATCTTTTCGGCTGCCATCCATGACTATGAACATACTGGAACTACAAACAATTTCCACATTCAGACTC  1030

Query  851  GGTCTGATCCAGCTATTCTGTATAATGACAGATCTGTACTGGAGAATCACCATTTAAGTGCAGCTTATCGCCTT  924
            ||||.|||||||||||.|||||.||||||||||||||.||||||||.|||||..|.||||||||.||.||||||
Sbjct 1031  GGTCAGATCCAGCTATCCTGTACAATGACAGATCTGTCCTGGAGAACCACCACCTGAGTGCAGCCTACCGCCTT  1104

Query  925  CTGCAAGATGACGAGGAAATGAATATTTTGATTAACCTCTCAAAGGATGACTGGAGGGAGTTTCGAACCTTGGT  998
            |||||.||.|||||.||.|||||||||.||.|||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1105  CTGCAGGAAGACGAAGAGATGAATATTCTGGTTAACCTCTCAAAGGATGACTGGAGGGAGTTTCGAACTTTGGT  1178

Query  999  AATTGAAATGGTGATGGCCACAGATATGTCTTGTCACTTCCAACAAATCAAAGCAATGAAGACTGCTCTGCAGC  1072
            .|||||.|||||.|||||||||||||||||.|||||.|||||.|||||||||||.||||||||.||.|||||||
Sbjct 1179  TATTGAGATGGTAATGGCCACAGATATGTCCTGTCATTTCCAGCAAATCAAAGCCATGAAGACAGCCCTGCAGC  1252

Query 1073  AGCCAGAAGCCATTGAAAAGCCAAAAGCCTTATCCCTTATGCTGCATACAGCAGATATTAGCCATCCAGCAAAA  1146
            |.||||||||.|||||.|||||.||||||||||||||.|||.|.||.||||||||.||.||.|||||.||.|||
Sbjct 1253  AACCAGAAGCAATTGAGAAGCCGAAAGCCTTATCCCTCATGTTACACACAGCAGACATCAGTCATCCTGCGAAA  1326

Query 1147  GCATGGGACCTCCATCATCGCTGGACAATGTCACTCCTGGAGGAGTTCTTCAGACAGGGTGACAGAGAAGCAGA  1220
            |||||||||||.||.||.||||||||.|||||.|||||||||||||||||.|||||||||||||||||||||||
Sbjct 1327  GCATGGGACCTGCACCACCGCTGGACCATGTCTCTCCTGGAGGAGTTCTTTAGACAGGGTGACAGAGAAGCAGA  1400

Query 1221  GCTGGGGCTGCCTTTTTCTCCTCTGTGTGACCGAAAGTCCACTATGGTTGCTCAGTCACAAGTAGGTTTCATTG  1294
            ||||||||||||.|||||||||||.||||||.|||||||.||.||||||||||||||||||||.|||||.||||
Sbjct 1401  GCTGGGGCTGCCATTTTCTCCTCTTTGTGACAGAAAGTCAACCATGGTTGCTCAGTCACAAGTGGGTTTTATTG  1474

Query 1295  ATTTCATCGTGGAACCCACCTTCACTGTGCTTACGGACATGACCGAGAAGATTGTGAGTCCATTAATCGATGAA  1368
            |.|||||.|||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||.||.|||
Sbjct 1475  ACTTCATTGTGGAGCCCACCTTCACTGTGCTCACGGACATGACCGAGAAGATTGTGAGTCCATTAATTGACGAA  1548

Query 1369  ACCTCTCAAACTGGTGGGACAGGACAGAGGCGTTCGAGTTTGAATAGCATCAGCTCGTCAGATGCCAAGCGATC  1442
            |.|||.||.||||||||||||||.||||||.|.||.||||||||.|||||||.|||.||||||||.||||||||
Sbjct 1549  AGCTCCCAGACTGGTGGGACAGGGCAGAGGAGATCAAGTTTGAACAGCATCAACTCATCAGATGCAAAGCGATC  1622

Query 1443  AGGTGTCAAGACCTCTGGTTCAGAGGGAAGTGCCCCGATCAACAATTCTGTCATCTCC-GTTGACTATAAGAGC  1515
            .||||||||||..|||||.|||||.||||||||.||.||||||||||||||||| ||| ||||||||||||||.
Sbjct 1623  CGGTGTCAAGAGTTCTGGGTCAGATGGAAGTGCTCCCATCAACAATTCTGTCAT-TCCTGTTGACTATAAGAGT  1695

Query 1516  TTTAAAGCTACTTGGACGGAAGTGGTGCACATCAATCGGGAGAGATGGAGGGCCAAGGTACCCAAAGAGGAGAA  1589
            ||||||||.||||||||.||.||||||||.||||||||||||.|.|||.|.|||||||||||||||||.||.||
Sbjct 1696  TTTAAAGCCACTTGGACTGAGGTGGTGCAGATCAATCGGGAGCGGTGGCGAGCCAAGGTACCCAAAGAAGAAAA  1769

Query 1590  GGCCAAGAAGGAAGCAGAGGAAAAGGCTCGCATGGCCGCAGAGGAGCAGCAAAAGGAAATGGAAGCCAAAAGCC  1663
            .||||||||||||||.||.||.|||||||||.||||.||.|||||..|||||||||||||||||||||||||||
Sbjct 1770  AGCCAAGAAGGAAGCTGAAGAGAAGGCTCGCCTGGCTGCTGAGGAAAAGCAAAAGGAAATGGAAGCCAAAAGCC  1843

Query 1664  AGGCTGAAGAAGGCGCATCTGGCAAAGCTGAGAAAAAGACGTCTGGAGAAACTAAGAATCAAGTCAATGGAACA  1737
            |.||||||.|||||.||.|..||||||..|||||||||||.||.||||||.|.||.|.||||||||||||||||
Sbjct 1844  AAGCTGAACAAGGCACAACCAGCAAAGGCGAGAAAAAGACATCAGGAGAAGCCAAAAGTCAAGTCAATGGAACA  1917

Query 1738  CGGGCAAACAAAAGTGACAACCCTCGTGGGAAAAATTCCAAAGCCGAGAAGTCATCAGGAGAACAGCAACAGAA  1811
            ||      |||..||||.||||||||||||||.||.|||||||..||.|||   .||||.|||.||||.|||||
Sbjct 1918  CG------CAAGGGTGATAACCCTCGTGGGAAGAACTCCAAAGGAGAAAAG---GCAGGCGAAAAGCAGCAGAA  1982

Query 1812  TGGTGACTTCAAAGATGGTAAAAATAAGACAGACAAGAAGGATCACTCTAACATCGGAAATGATTCAAAGAAAA  1885
            .||||||||.|||||.||||||||||||.|||||||||||||||||||.||||.|||||||||.||||||||||
Sbjct 1983  CGGTGACTTGAAAGACGGTAAAAATAAGGCAGACAAGAAGGATCACTCCAACACCGGAAATGAGTCAAAGAAAA  2056

Query 1886  CAGATGATTCACAAGAG---------------------------------------------------------  1902
            ||||||.|.|| ||||.                                                         
Sbjct 2057  CAGATGGTACA-AAGAAGCGTTCTCATGGCTCACCTGCTCCGAGCACTAGTTCCACAAGTCGCATTACCTTGCC  2129

Query 1903  --------------------------------------------------------------------------  1902
                                                                                      
Sbjct 2130  AGTCATCAAGCCTCCTTTGCGTCACTTTAAGCGTCCTGCTTATGCATCTAGCTCCTATGCACCTTCCGTCCCGA  2203

Query 1903  --------------------------------------------------------------------------  1902
                                                                                      
Sbjct 2204  AGAAAACTGATGATCATCCTGTAAGATACAAGATGCTGGATCAGCGGATCAAGATGAAAAAGATCCAGAACATC  2277

Query 1903  ---------------------  1902
                                 
Sbjct 2278  TCTCATCACTGGAACAAAAAA  2298

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