Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_06700
Subject:
XM_017012264.1
Aligned Length:
2418
Identities:
1862
Gaps:
522

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCCACTTCACAGCATTTGCACTTCGACCGAGAGCAGCCCTGTCTTTTGCCTGAGGAGCTCTCACAATGGAGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCCATTGTCAGCAAACAATTAGAGTGCCCGCTTTTAGGGGGCCAGCTGAGAGGTTGTATTTGCTGTGGGAAAC  148

Query    1  --------ATGGAGTC-----------------GCCAA-------CAAA-------GGAGATTGAAGAATTTGA  35
                    .|||||||                 |||.|       ||||       |||||  .||||||...|
Sbjct  149  CCTGGGCTTTGGAGTCACACGCAGATTTATCATGCCCATTAGTTGCAAATGAAGCTGGAGA--CAAGAATGCCA  220

Query   36  GAGC-------------------------------AACTCTCT---GAAATACCTGCAACCGGA-------ACA  68
            ||.|                               ||||.|||   |||.|.||| ||.|  ||       |||
Sbjct  221  GACCACTGGCCCGCTTCTCTCGGTCTAAGTCACAGAACTGTCTGTGGAACTCCCT-CATC--GATGGGCTCACA  291

Query   69  G--------ATCGAGAA------------AATCTG-------GCTTCGGCTCC--GCGG--------GCTGAGG  105
            |        |..|||||            ||| ||       .|.|||.|.||  |.||        |||||.|
Sbjct  292  GGGAATGTCAAGGAGAAGCCAAGGCCAACAAT-TGTCCATGACCCTCGACCCCCAGAGGAGATCCTAGCTGATG  364

Query  106  AAAT-----------ATA---------------AGAAAACGTCCCAGAGATTACGGTCTTTGGTCAAACAATTA  153
            ||.|           |||               .|||.||.|||...|||||||||||||||||||||||||||
Sbjct  365  AATTGCCACAGCTGGATAGCCCAGAAGTCTTGGTGAAGACATCCTTCAGATTACGGTCTTTGGTCAAACAATTA  438

Query  154  GAGAGAGGGGAAGCTTCAGTGGTAGATCTTAAGAAGAATTTGGAATATGCAGCCACAGTGCTTGAATCTGTGTA  227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  439  GAGAGAGGGGAAGCTTCAGTGGTAGATCTTAAGAAGAATTTGGAATATGCAGCCACAGTGCTTGAATCTGTGTA  512

Query  228  TATTGATGAAACAAGGAGACTCCTGGATACAGAGGATGAGCTCAGTGACATTCAGTCAGATGCTGTGCCTTCTG  301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  513  TATTGATGAAACAAGGAGACTCCTGGATACAGAGGATGAGCTCAGTGACATTCAGTCAGATGCTGTGCCTTCTG  586

Query  302  AGGTCCGAGACTGGCTGGCCTCCACCTTCACGCGGCAGATGGGGATGATGCTCAGGAGGAGCGACGAGAAGCCC  375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  587  AGGTCCGAGACTGGCTGGCCTCCACCTTCACGCGGCAGATGGGGATGATGCTCAGGAGGAGCGACGAGAAGCCC  660

Query  376  CGGTTCAAGAGCATCGTTCACGCAGTGCAGGCTGGGATATTTGTGGAGAGAATGTATAGACGGACATCAAACAT  449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  661  CGGTTCAAGAGCATCGTTCACGCAGTGCAGGCTGGGATATTTGTGGAGAGAATGTATAGACGGACATCAAACAT  734

Query  450  GGTTGGACTGAGCTATCCACCAGCTGTTATTGAGGCATTAAAGGATGTGGACAAGTGGTCATTTGACGTCTTTT  523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct  735  GGTTGGACTGAGCTATCCACCAGCTGTTATTGAGGCATTAAAGGATGTGGACAAGTGGTCCTTTGACGTCTTTT  808

Query  524  CCCTCAATGAGGCCAGTGGGGATCATGCACTGAAATTTATTTTCTATGAACTACTCACACGTTATGATCTGATC  597
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  809  CCCTCAATGAGGCCAGTGGGGATCATGCACTGAAATTTATTTTCTATGAACTACTCACACGTTATGATCTGATC  882

Query  598  AGCCGTTTCAAGATCCCCATTTCTGCACTTGTCTCATTTGTGGAGGCCCTGGAAGTGGGATACAGCAAGCACAA  671
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  883  AGCCGTTTCAAGATCCCCATTTCTGCACTTGTCTCATTTGTGGAGGCCCTGGAAGTGGGATACAGCAAGCACAA  956

Query  672  AAATCCTTACCATAACTTAATGCACGCTGCCGATGTTACACAGACAGTGCATTACCTCCTCTATAAGACAGGAG  745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  957  AAATCCTTACCATAACTTAATGCACGCTGCCGATGTTACACAGACAGTGCATTACCTCCTCTATAAGACAGGAG  1030

Query  746  TGGCGAACTGGCTGACGGAGCTGGAGATCTTTGCTATAATCTTCTCAGCTGCCATCCATGACTACGAGCATACC  819
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031  TGGCGAACTGGCTGACGGAGCTGGAGATCTTTGCTATAATCTTCTCAGCTGCCATCCATGACTACGAGCATACC  1104

Query  820  GGAACCACCAACAATTTCCACATTCAGACTCGGTCTGATCCAGCTATTCTGTATAATGACAGATCTGTACTGGA  893
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105  GGAACCACCAACAATTTCCACATTCAGACTCGGTCTGATCCAGCTATTCTGTATAATGACAGATCTGTACTGGA  1178

Query  894  GAATCACCATTTAAGTGCAGCTTATCGCCTTCTGCAAGATGACGAGGAAATGAATATTTTGATTAACCTCTCAA  967
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179  GAATCACCATTTAAGTGCAGCTTATCGCCTTCTGCAAGATGACGAGGAAATGAATATTTTGATTAACCTCTCAA  1252

Query  968  AGGATGACTGGAGGGAGTTTCGAACCTTGGTAATTGAAATGGTGATGGCCACAGATATGTCTTGTCACTTCCAA  1041
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1253  AGGATGACTGGAGGGAGTTTCGAACCTTGGTAATTGAAATGGTGATGGCCACAGATATGTCTTGTCACTTCCAA  1326

Query 1042  CAAATCAAAGCAATGAAGACTGCTCTGCAGCAGCCAGAAGCCATTGAAAAGCCAAAAGCCTTATCCCTTATGCT  1115
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1327  CAAATCAAAGCAATGAAGACTGCTCTGCAGCAGCCAGAAGCCATTGAAAAGCCAAAAGCCTTATCCCTTATGCT  1400

Query 1116  GCATACAGCAGATATTAGCCATCCAGCAAAAGCATGGGACCTCCATCATCGCTGGACAATGTCACTCCTGGAGG  1189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1401  GCATACAGCAGATATTAGCCATCCAGCAAAAGCATGGGACCTCCATCATCGCTGGACAATGTCACTCCTGGAGG  1474

Query 1190  AGTTCTTCAGACAGGGTGACAGAGAAGCAGAGCTGGGGCTGCCTTTTTCTCCTCTGTGTGACCGAAAGTCCACT  1263
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1475  AGTTCTTCAGACAGGGTGACAGAGAAGCAGAGCTGGGGCTGCCTTTTTCTCCTCTGTGTGACCGAAAGTCCACT  1548

Query 1264  ATGGTTGCTCAGTCACAAGTAGGTTTCATTGATTTCATCGTGGAACCCACCTTCACTGTGCTTACGGACATGAC  1337
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1549  ATGGTTGCTCAGTCACAAGTAGGTTTCATTGATTTCATCGTGGAACCCACCTTCACTGTGCTTACGGACATGAC  1622

Query 1338  CGAGAAGATTGTGAGTCCATTAATCGATGAAACCTCTCAAACTGGTGGGACAGGACAGAGGCGTTCGAGTTTGA  1411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1623  CGAGAAGATTGTGAGTCCATTAATCGATGAAACCTCTCAAACTGGTGGGACAGGACAGAGGCGTTCGAGTTTGA  1696

Query 1412  ATAGCATCAGCTCGTCAGATGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAGAGGGAAGTGCCCCGATCAAC  1485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1697  ATAGCATCAGCTCGTCAGATGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAGAGGGAAGTGCCCCGATCAAC  1770

Query 1486  AATTCTGTCATCTCCGTTGACTATAAGAGCTTTAAAGCTACTTGGACGGAAGTGGTGCACATCAATCGGGAGAG  1559
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1771  AATTCTGTCATCTCCGTTGACTATAAGAGCTTTAAAGCTACTTGGACGGAAGTGGTGCACATCAATCGGGAGAG  1844

Query 1560  ATGGAGGGCCAAGGTACCCAAAGAGGAGAAGGCCAAGAAGGAAGCAGAGGAAAAGGCTCGCATGGCCGCAGAGG  1633
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1845  ATGGAGGGCCAAGGTACCCAAAGAGGAGAAGGCCAAGAAGGAAGCAGAGGAAAAGGCTCGCCTGGCCGCAGAGG  1918

Query 1634  AGCAGCAAAAGGAAATGGAAGCCAAAAGCCAGGCTGAAGAAGGCGCATCTGGCAAAGCTGAGAAAAAGACGTCT  1707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1919  AGCAGCAAAAGGAAATGGAAGCCAAAAGCCAGGCTGAAGAAGGCGCATCTGGCAAAGCTGAGAAAAAGACGTCT  1992

Query 1708  GGAGAAACTAAGAATCAAGTCAATGGAACACGGGCAAACAAAAGTGACAACCCTCGTGGGAAAAATTCCAAAGC  1781
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 1993  GGAGAAACTAAGAATCAAGTCAATGGAACACGGGCAAACAAAAGTGACAACCCTCGTGGGAAAAACTCCAAAGC  2066

Query 1782  CGAGAAGTCATCAGGAGAACAGCAACAGAATGGTGACTTCAAAGATGGTAAAAATAAGACAGACAAGAAGGATC  1855
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2067  CGAGAAGTCATCAGGAGAACAGCAACAGAATGGTGACTTCAAAGATGGTAAAAATAAGACAGACAAGAAGGATC  2140

Query 1856  ACTCTAACATCGGAAATGATTCAAAGAAAACAGATGATTCACAAGAG---------------------------  1902
            ||||||||||||||||||||||||||||||||||||...||.||.||                           
Sbjct 2141  ACTCTAACATCGGAAATGATTCAAAGAAAACAGATGGCACAAAACAGCGTTCTCACGGCTCACCAGCCCCAAGC  2214

Query 1903  --------------------------------------------------------------------------  1902
                                                                                      
Sbjct 2215  ACCAGCTCCACGTGTCGCCTTACGTTGCCAGTCATCAAGCCTCCTTTGCGTCATTTTAAACGCCCTGCTTACGC  2288

Query 1903  --------------------------------------------------------------------------  1902
                                                                                      
Sbjct 2289  ATCTAGCTCCTATGCACCTTCAGTCTCAAAGAAAACTGATGAGCATCCTGCAAGGTACAAGATGCTGGATCAGA  2362

Query 1903  --------------------------------------------------  1902
                                                              
Sbjct 2363  GGATCAAAATGAAAAAGATTCAGAACATCTCACATAACTGGAACAGAAAA  2412

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