Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06700
- Subject:
- XR_377431.1
- Aligned Length:
- 3546
- Identities:
- 1679
- Gaps:
- 1655
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCAGACTGACCGTTGTTTACCACAAAGGCACACCGGAAACCGGGGCCCTCTTAGAGTTGGCGTCCTACATCTG 74
Query 1 -----------------------------------ATGGAGTCGCCAACAAAGGAGATTGAAGAATTTGAGAGC 39
||||||||.|||||.|||||.|||||||||||.||||||
Sbjct 75 CTAATGGCCTACAGTATTCATGAGAACCTGCAGCTATGGAGTCTCCAACCAAGGAAATTGAAGAATTCGAGAGC 148
Query 40 AACTCTCTGAAATACCTGCAACCGGAACAGATCGAGAAAATCTGGCTTCGGCTCCGCGGGCTGAGGAAATATAA 113
||||||||||||.||||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AACTCTCTGAAACACCTGCAACCTGAGCAGATCGAGAAAATCTGGCTTCGGCTCCGCGGGCTGAGGAAATATAA 222
Query 114 GAAAACGTCCCAGAGATTACGGTCTTTGGTCAAACAATTAGAGAGAGGGGAAGCTTCAGTGGTAGATCTTAAGA 187
|||||||||||||||.|||||||||||||||||.||||||||..||||.||.||.||.||||||||.|||||||
Sbjct 223 GAAAACGTCCCAGAGGTTACGGTCTTTGGTCAAGCAATTAGAACGAGGAGAGGCCTCTGTGGTAGACCTTAAGA 296
Query 188 AGAATTTGGAATATGCAGCCACAGTGCTTGAATCTGTGTATATTGATGAAACAAGGAGACTCCTGGATACAGAG 261
|||||.|||||||||||||||||||||||||||||||.||||||||||||||||||.||||.||||||||||||
Sbjct 297 AGAATCTGGAATATGCAGCCACAGTGCTTGAATCTGTATATATTGATGAAACAAGGCGACTGCTGGATACAGAG 370
Query 262 GATGAGCTCAGTGACATTCAGTCAGATGCTGTGCCTTCTGAGGTCCGAGACTGGCTGGCCTCCACCTTCACGCG 335
||||||||.|||||||||||.|||||||||||||||||.||.||.||.||.||||||||||||||||||||.||
Sbjct 371 GATGAGCTTAGTGACATTCAATCAGATGCTGTGCCTTCAGAAGTTCGGGATTGGCTGGCCTCCACCTTCACACG 444
Query 336 GCAGATGGGGATGATGCTCAGGAGGAGCGACGAGAAGCCCCGGTTCAAGAGCATCGTTCACGCAGTGCAGGCTG 409
||||||||||||||||||.|||||.||.||.|||||||||.||||||||||||||||.||.||.|||||.||||
Sbjct 445 GCAGATGGGGATGATGCTTAGGAGAAGTGATGAGAAGCCCAGGTTCAAGAGCATCGTCCATGCGGTGCAAGCTG 518
Query 410 GGATATTTGTGGAGAGAATGTATAGACGGACATCAAACATGGTTGGACTGAGCTATCCACCAGCTGTTATTGAG 483
|||||||||||||.||||||||.|||||||||||||||||||||||.||||||||||||||.|||||.||.||.
Sbjct 519 GGATATTTGTGGAAAGAATGTACAGACGGACATCAAACATGGTTGGGCTGAGCTATCCACCGGCTGTAATCGAT 592
Query 484 GCATTAAAGGATGTGGACAAGTGGTCATTTGACGTCTTTTCCCTCAATGAGGCCAGTGGGGATCATGCACTGAA 557
|||||.|||||||||||.|.||||||.||.||.||||||||||||||||||||||||||.||||||||||||||
Sbjct 593 GCATTGAAGGATGTGGATACGTGGTCCTTCGATGTCTTTTCCCTCAATGAGGCCAGTGGAGATCATGCACTGAA 666
Query 558 ATTTATTTTCTATGAACTACTCACACGTTATGATCTGATCAGCCGTTTCAAGATCCCCATTTCTGCACTTGTCT 631
.||.||||||||||||.||||||||||||||||.||||||||||||||.|||||.||.||||||||||||||||
Sbjct 667 GTTCATTTTCTATGAATTACTCACACGTTATGACCTGATCAGCCGTTTTAAGATACCGATTTCTGCACTTGTCT 740
Query 632 CATTTGTGGAGGCCCTGGAAGTGGGATACAGCAAGCACAAAAATCCTTACCATAACTTAATGCACGCTGCCGAT 705
||||||||||||||||.||||||||.||||||||||||||||||||||||||||||.|.|||||.||.||.||.
Sbjct 741 CATTTGTGGAGGCCCTCGAAGTGGGTTACAGCAAGCACAAAAATCCTTACCATAACCTGATGCATGCAGCTGAC 814
Query 706 GTTACACAGACAGTGCATTACCTCCTCTATAAGACAGGAGTGGCGAACTGGCTGACGGAGCTGGAGATCTTTGC 779
||.||||||||.||||||||||||||.||||||||||||||.||.|||||||||||.|||||||||||||||||
Sbjct 815 GTCACACAGACTGTGCATTACCTCCTTTATAAGACAGGAGTAGCAAACTGGCTGACAGAGCTGGAGATCTTTGC 888
Query 780 TATAATCTTCTCAGCTGCCATCCATGACTACGAGCATACCGGAACCACCAACAATTTCCACATTCAGACTCGGT 853
.||||||||.||.|||||||||||||||||.||.|||||.|||||.||.|||||||||||||||||||||||||
Sbjct 889 AATAATCTTTTCGGCTGCCATCCATGACTATGAACATACTGGAACTACAAACAATTTCCACATTCAGACTCGGT 962
Query 854 CTGATCCAGCTATTCTGTATAATGACAGATCTGTACTGGAGAATCACCATTTAAGTGCAGCTTATCGCCTTCTG 927
|.|||||||||||.|||||.||||||||||||||.||||||||.|||||..|.||||||||.||.|||||||||
Sbjct 963 CAGATCCAGCTATCCTGTACAATGACAGATCTGTCCTGGAGAACCACCACCTGAGTGCAGCCTACCGCCTTCTG 1036
Query 928 CAAGATGACGAGGAAATGAATATTTTGATTAACCTCTCAAAGGATGACTGGAGGGAGTTTCGAACCTTGGTAAT 1001
||.||.|||||.||.|||||||||.||.|||||||||||||||||||||||||||||||||||||.|||||.||
Sbjct 1037 CAGGAAGACGAAGAGATGAATATTCTGGTTAACCTCTCAAAGGATGACTGGAGGGAGTTTCGAACTTTGGTTAT 1110
Query 1002 TGAAATGGTGATGGCCACAGATATGTCTTGTCACTTCCAACAAATCAAAGCAATGAAGACTGCTCTGCAGCAGC 1075
|||.|||||.|||||||||||||||||.|||||.|||||.|||||||||||.||||||||.||.||||||||.|
Sbjct 1111 TGAGATGGTAATGGCCACAGATATGTCCTGTCATTTCCAGCAAATCAAAGCCATGAAGACAGCCCTGCAGCAAC 1184
Query 1076 CAGAAGCCATTGAAAAGCCAAAAGCCTTATCCCTTATGCTGCATACAGCAGATATTAGCCATCCAGCAAAAGCA 1149
|||||||.|||||.|||||.||||||||||||||.|||.|.||.||||||||.||.||.|||||.||.||||||
Sbjct 1185 CAGAAGCAATTGAGAAGCCGAAAGCCTTATCCCTCATGTTACACACAGCAGACATCAGTCATCCTGCGAAAGCA 1258
Query 1150 TGGGACCTCCATCATCGCTGGACAATGTCACTCCTGGAGGAGTTCTTCAGACAGGGTGACAGAGAAGCAGAGCT 1223
||||||||.||.||.||||||||.|||||.|||||||||||||||||.||||||||||||||||||||||||||
Sbjct 1259 TGGGACCTGCACCACCGCTGGACCATGTCTCTCCTGGAGGAGTTCTTTAGACAGGGTGACAGAGAAGCAGAGCT 1332
Query 1224 GGGGCTGCCTTTTTCTCCTCTGTGTGACCGAAAGTCCACTATGGTTGCTCAGTCACAAGTAGGTTTCATTGATT 1297
|||||||||.|||||||||||.||||||.|||||||.||.||||||||||||||||||||.|||||.|||||.|
Sbjct 1333 GGGGCTGCCATTTTCTCCTCTTTGTGACAGAAAGTCAACCATGGTTGCTCAGTCACAAGTGGGTTTTATTGACT 1406
Query 1298 TCATCGTGGAACCCACCTTCACTGTGCTTACGGACATGACCGAGAAGATTGTGAGTCCATTAATCGATGAAACC 1371
||||.|||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||.||.||||.|
Sbjct 1407 TCATTGTGGAGCCCACCTTCACTGTGCTCACGGACATGACCGAGAAGATTGTGAGTCCATTAATTGACGAAAGC 1480
Query 1372 TCTCAAACTGGTGGGACAGGACAGAGGCGTTCGAGTTTGAATAGCATCAGCTCGTCAGATGCCAAGCGATCAGG 1445
||.||.||||||||||||||.||||||.|.||.||||||||.|||||||.|||.||||||||.||||||||.||
Sbjct 1481 TCCCAGACTGGTGGGACAGGGCAGAGGAGATCAAGTTTGAACAGCATCAACTCATCAGATGCAAAGCGATCCGG 1554
Query 1446 TGTCAAGACCTCTGGTTCAGAGGGAAGTGCCCCGATCAACAATTCTGTCATCTCC-GTTGACTATAAGAGCTTT 1518
||||||||..|||||.|||||.||||||||.||.||||||||||||||||| ||| ||||||||||||||.|||
Sbjct 1555 TGTCAAGAGTTCTGGGTCAGATGGAAGTGCTCCCATCAACAATTCTGTCAT-TCCTGTTGACTATAAGAGTTTT 1627
Query 1519 AAAGCTACTTGGACGGAAGTGGTGCACATCAATCGGGAGAGATGGAGGGCCAAGGTACCCAAAGAGGAGAAGGC 1592
|||||.||||||||.||.||||||||.||||||||||||.|.|||.|.|||||||||||||||||.||.||.||
Sbjct 1628 AAAGCCACTTGGACTGAGGTGGTGCAGATCAATCGGGAGCGGTGGCGAGCCAAGGTACCCAAAGAAGAAAAAGC 1701
Query 1593 CAAGAAGGAAGCAGAGGAAAAGGCTCGCATGGCCGCAGAGGAGCAGCAAAAGGAAATGGAAGCCAAAAGCCAGG 1666
||||||||||||.||.||.|||||||||.||||.||.|||||..||||||||||||||||||||||||||||.|
Sbjct 1702 CAAGAAGGAAGCTGAAGAGAAGGCTCGCCTGGCTGCTGAGGAAAAGCAAAAGGAAATGGAAGCCAAAAGCCAAG 1775
Query 1667 CTGAAGAAGGCGCATCTGGCAAAGCTGAGAAAAAGACGTCTGGAGAAACTAAGAATCAAGTCAATGGAACACGG 1740
|||||.|||||.||.|..||||||..|||||||||||.||.||||||.|.||.|.||||||||||||||||||
Sbjct 1776 CTGAACAAGGCACAACCAGCAAAGGCGAGAAAAAGACATCAGGAGAAGCCAAAAGTCAAGTCAATGGAACACG- 1848
Query 1741 GCAAACAAAAGTGACAACCCTCGTGGGAAAAATTCCAAAGCCGAGAAGTCATCAGGAGAACAGCAACAGAATGG 1814
|||..||||.||||||||||||||.||.|||||||..||.||| .||||.|||.||||.|||||.||
Sbjct 1849 -----CAAGGGTGATAACCCTCGTGGGAAGAACTCCAAAGGAGAAAAG---GCAGGCGAAAAGCAGCAGAACGG 1914
Query 1815 TGACTTCAAAGATGGTAAAAATAAGACAGACAAGAAGGATCACTCTAACATCGGAAATGATTCAAAGAAAACAG 1888
||||||.|||||.||||||||||||.|||||||||||||||||||.||||.|||||||||.|||||||||||||
Sbjct 1915 TGACTTGAAAGACGGTAAAAATAAGGCAGACAAGAAGGATCACTCCAACACCGGAAATGAGTCAAAGAAAACAG 1988
Query 1889 ATGATTCACAAGAG------------------------------------------------------------ 1902
|||.|.|| ||||.
Sbjct 1989 ATGGTACA-AAGAAGCGTTCTCATGGCTCACCTGCTCCGAGCACTAGTTCCACAAGTCGCATTACCTTGCCAGG 2061
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 2062 AGACTACGGATAAAACATCATCCAGAAACTTCCTTGGAAGAAACCTGACCATCCCCAAGTCATCAAGCCTCCTT 2135
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 2136 TGCGTCACTTTAAGCGTCCTGCTTATGCATCTAGCTCCTATGCACCTTCCGTCCCGAAGAAAACTGATGATCAT 2209
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 2210 CCTGTAAGATACAAGATGCTGGATCAGCGGATCAAGATGAAAAAGATCCAGAACATCTCTCATCACTGGAACAA 2283
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 2284 AAAATAGGAGTACCCAGGGATCCATGAAGTGCCTGTCGCTCGAAGACTCCAGGCTCCAGATCTACCACAGGGGA 2357
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 2358 ATATGGTTTTGTGGAACTGAAGCAGGAAGCTGTAAACTGATAAACCTAAAGTTATTTCCTCATTTCCAGCTTTG 2431
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 2432 CCCCCCAGAGTTTAGAGATGCCTTTAAATTAAATCTTAGCTCATCTAGGCCACAGACTGCCCACCCAAAGCTCT 2505
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 2506 TGAGGTTCCCACCTGCTCTCCTCACTGTTGGTGGGACAGAAATCTTCCTAAGTCACCTCTTGTTGGCATGCCAT 2579
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 2580 TGTTAGCTTTTCTATGACTTTACCAAGAAGTTTTACTTTGAGACTAAAATCATAGAGATGCAAGGGAATTCTCA 2653
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 2654 CACCTGGAGAGAGCATCCGAAGGTTCAATTGGTTTTAAGACAAGCTTGCTCTGCCTGAGACTTGCATTGGGTCC 2727
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 2728 TTGAGCTTTCCATGTGACATTTTCAAGTCTCAGTTTGTTTAACCTACTACTTTTCTGATGGAGATGGACTGTGG 2801
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 2802 GTTTCAGGAAGCTATTGCCACACCCGCTGACTATAGGTACAGAGAAGCTTTAGTACAGGGCACTCCATGTTCAG 2875
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 2876 GGAAGCAAGGAACCTTTTGTGATAGTCACAGAATCCTGGCTTTGATTAGAGAGTTCAGTTCATTTCCACAGACC 2949
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 2950 ATAATTATCCAAGAAATAAGCTCCAGCATCCAGTGAGCACTGATAAGGTTGGGCAGCTCATATATAATGTAGTT 3023
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3024 TGTTCAGATAATTGTTATACAAGCGAGAAATCACTGTGACTTTTTGATATGGAAGACAATCACAATTCTTAGTT 3097
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3098 CCCTACCCAGTATTTGAGCAAGAAAAGCTGTCCGCAGCTTGGAAGTGTACCTCCATCTGGATTAGTTTAACTCA 3171
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3172 CAGGTACTGTCTACTTGGTACCATGCAGAAACTTTCATGCAGAATGCAAAGAGCCACTTTGACTACACACTGAC 3245
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3246 AAGGTTTGGGGGACCTTCCTGTCTCTTAAAACTTCCTGACTTAGTTTACAGGCCTCAGTGGTTCTTCTCTTTCA 3319
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3320 TGGCTGATTGAGGGTAGGGTGTTGAGGATGTTTGTTCTTTCTGTGGTTTTTTTTTTCTCTTAAGATGTGATTTT 3393
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3394 TTTTTTCAATCTTTGCTAAAATTTTAGTTCAATAAACATTCACATGTGGAGAGTCTACATTGCTTATAAATGCC 3467
Query 1903 -------------------------------------------------------------------- 1902
Sbjct 3468 TACTATGTTTTACAAGCAGAAAATGAAAGATTATATTCTTATAGCAAATAAAAAATGCTTTGAATGGA 3535
