Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06793
- Subject:
- NM_001297773.2
- Aligned Length:
- 1320
- Identities:
- 564
- Gaps:
- 699
Alignment
Query 1 ATGCACGCAGCAGAGATCATGGGGCCCCTCTCAGCCCCTCCCTGCACAGAGCACATCAAATGGAAGGGGCTCCT 74
|||||..|||||||||||||||||||||||.|||.|||||||||||||||||||||
Sbjct 1 ------------------ATGGGAACCCTCTCAGCCCCTCCCTGCACACAGCGCATCAAATGGAAGGGGCTCCT 56
Query 75 GCTCACAG------------------------------------------------------------------ 82
||||||||
Sbjct 57 GCTCACAGCATCACTTTTAAACTTCTGGAACCTGCCCACCACTGCCCAAGTCACGATTGAAGCCGAGCCAACCA 130
Query 83 -------------------------------------------------------------------------- 82
Sbjct 131 AAGTTTCCGAGGGGAAGGATGTTCTTCTACTTGTCCACAATTTGCCCCAGAATCTTACCGGCTACATCTGGTAC 204
Query 83 -------------------------------------------------------------------------- 82
Sbjct 205 AAAGGGCAAATGAGGGACCTCTACCATTACATTACATCATATGTAGTAGACGGTGAAATAATTATATATGGGCC 278
Query 83 -------------------------------------------------------------------------- 82
Sbjct 279 TGCATATAGTGGACGAGAAACAGCATATTCCAATGCATCCCTGCTGATCCAGAATGTCACCCGGGAGGACGCAG 352
Query 83 -------------------------------------------------------------------------- 82
Sbjct 353 GATCCTACACCTTACACATCATAAAGGGAGATGATGGGACTAGAGGAGTAACTGGACGTTTCACCTTCACCTTA 426
Query 83 ----TGGAGACTCCCAAGCCCTCCATCTCCAGCAGCAACTTAAACCCCAGGGAGGCCATGGAGACTGTGATCTT 152
||||||||||.|||||||||||||||||||||||||||||.|||||||||.||||||||.||||||.|||
Sbjct 427 CACCTGGAGACTCCTAAGCCCTCCATCTCCAGCAGCAACTTAAATCCCAGGGAGACCATGGAGGCTGTGAGCTT 500
Query 153 AACCTGTAATCCTGAGACTCCGGACGCAAGCTACCTGTGGTGGATGAATGGTCAGAGCCTCCCTATGACTCATA 226
|||||||.|.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 501 AACCTGTGACCCTGAGACTCCAGACGCAAGCTACCTGTGGTGGATGAATGGTCAGAGCCTCCCTATGACTCACA 574
Query 227 GGATGCAGCTGTCTGAAACCAACAGGACCCTCTTTCTATTTGGTGTCACAAAGTATACTGCAGGACCCTATGAA 300
|..||.|||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 575 GCTTGAAGCTGTCCGAAACCAACAGGACCCTCTTTCTATTGGGTGTCACAAAGTATACTGCAGGACCCTATGAA 648
Query 301 TGTGAAATATGGAACTCAGGGAGTGCCAGCCGCAGTGACCCAGTCACCCTGAATCTCCTCC------------- 361
|||||||||.|||||.|||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 649 TGTGAAATACGGAACCCAGTGAGTGCCAGCCGCAGTGACCCAGTCACCCTGAATCTCCTCCCGAAGCTGCCCAA 722
Query 362 -------------------------------------------------------------------------- 361
Sbjct 723 GCCCTACATCACCATCAACAACTTAAACCCCAGGGAGAATAAGGATGTCTTAAACTTCACCTGTGAACCTAAGA 796
Query 362 -------------------------------------------------------------------------- 361
Sbjct 797 GTGAGAACTACACCTACATTTGGTGGCTAAATGGTCAGAGCCTCCCGGTCAGTCCCAGGGTAAAGCGACCCATT 870
Query 362 -------------------------------------------------------------------------- 361
Sbjct 871 GAAAACAGGATCCTCATTCTACCCAGTGTCACGAGAAATGAAACAGGACCCTATCAATGTGAAATACGGGACCG 944
Query 362 --------------------------------------------ATGGTCCAGACCTCCCCAGAATTTTCCCTT 391
||||||||||||||||||||||||.|||||
Sbjct 945 ATATGGTGGCATCCGCAGTGACCCAGTCACCCTGAATGTCCTCTATGGTCCAGACCTCCCCAGAATTTACCCTT 1018
Query 392 CAGTCACCTCTTACTATTCAGGAGAGAACCTCGACTTGTCCTGCTTC-GCAGACTCTAACCCACCAGCACAGTA 464
||.||||||.||||..|||||||||...||||.|||||||||| ||| ||.||||||||||||||.||||||||
Sbjct 1019 CATTCACCTATTACCGTTCAGGAGAAGTCCTCTACTTGTCCTG-TTCTGCGGACTCTAACCCACCGGCACAGTA 1091
Query 465 TTCTTGGACAATTAATGGGAAGTTTCAGCTATCAGGACAAAAGCTCTTTATCCCTCAAATTACTCCAAAGCATA 538
|||||||||||||||||..||||||||||||.|||||||||||||||||||||..||.||||||.|||||||||
Sbjct 1092 TTCTTGGACAATTAATGAAAAGTTTCAGCTACCAGGACAAAAGCTCTTTATCCGCCATATTACTACAAAGCATA 1165
Query 539 ATGGGCTCTATGCTTGCTCTGCTCGTAACTCAGCCACTGGCGAGGAAAGCTCCACATCCTTGACAATCAGAGTC 612
..||||||||||.||||||||.|||||||||||||||||||.||||||||||||.||||.|||||.||..||||
Sbjct 1166 GCGGGCTCTATGTTTGCTCTGTTCGTAACTCAGCCACTGGCAAGGAAAGCTCCAAATCCATGACAGTCGAAGTC 1239
Query 613 ATTGCTCCTCCAGGATTAGGAACTTTTGC-TTTCAATAATCCA-ACG--------------- 657
..|||| |.|.|| .||||||||.|.| ||.
Sbjct 1240 TCTGCT-----------------TATAGCAGTTCAATAAACTATACTTCTGGGAACCGTAAT 1284
