Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06793
- Subject:
- XM_017027004.2
- Aligned Length:
- 1509
- Identities:
- 573
- Gaps:
- 876
Alignment
Query 1 ATGCACGCAGCAGAGATCATGGGGCCCCTCTCAGCCCCTCCCTGCACAGAGCACATCAAATGGAAGGGGCTCCT 74
||||||||||||.||||||||.||||||||.|||.|||||..||||||||||||||
Sbjct 1 ------------------ATGGGGCCCCTCCCAGCCCCTTCCTGCACACAGCGCATCACCTGGAAGGGGCTCCT 56
Query 75 GCTCACAG------------------------------------------------------------------ 82
||||||||
Sbjct 57 GCTCACAGCATCACTTTTAAACTTCTGGAACCCGCCCACCACTGCCGAAGTCACGATTGAAGCCCAGCCACCCA 130
Query 83 -------------------------------------------------------------------------- 82
Sbjct 131 AAGTTTCTGAGGGGAAGGATGTTCTTCTACTTGTCCACAATTTGCCCCAGAATCTTCCTGGCTACTTCTGGTAC 204
Query 83 -------------------------------------------------------------------------- 82
Sbjct 205 AAAGGGGAAATGACGGACCTCTACCATTACATTATATCGTATATAGTTGATGGTAAAATAATTATATATGGGCC 278
Query 83 -------------------------------------------------------------------------- 82
Sbjct 279 TGCATACAGTGGAAGAGAAACAGTATATTCCAACGCATCCCTGCTGATCCAGAATGTCACCCGGAAGGATGCAG 352
Query 83 -------------------------------------------------------------------------- 82
Sbjct 353 GAACCTACACCTTACACATCATAAAGCGAGGTGATGAGACTAGAGAAGAAATTCGACATTTCACCTTCACCTTA 426
Query 83 ----TGGAGACTCCCAAGCCCTCCATCTCCAGCAGCAACTTAAACCCCAGGGAGGCCATGGAGACTGTGATCTT 152
||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||.|||||..|||
Sbjct 427 TACTTGGAGACTCCCAAGCCCTACATCTCCAGCAGCAACTTAAACCCCAGGGAGGCCATGGAGGCTGTGCGCTT 500
Query 153 AACCTGTAATCCTGAGACTCCGGACGCAAGCTACCTGTGGTGGATGAATGGTCAGAGCCTCCCTATGACTCATA 226
||.||||.||||||||||||.|||||||||||||||.|||||||||||||||||||||||||||.|||||||.|
Sbjct 501 AATCTGTGATCCTGAGACTCTGGACGCAAGCTACCTATGGTGGATGAATGGTCAGAGCCTCCCTGTGACTCACA 574
Query 227 GGATGCAGCTGTCTGAAACCAACAGGACCCTCTTTCTATTTGGTGTCACAAAGTATACTGCAGGACCCTATGAA 300
||.||||||||||..||||||||||||||||||.|||||||||||||||||||||||.||||||||||||||||
Sbjct 575 GGTTGCAGCTGTCCAAAACCAACAGGACCCTCTATCTATTTGGTGTCACAAAGTATATTGCAGGACCCTATGAA 648
Query 301 TGTGAAATATGGAACTCAGGGAGTGCCAGCCGCAGTGACCCAGTCACCCTGAATCTCCTCC------------- 361
|||||||||.|||||.|||.|||||||||.|||||||||||||||||||||||||||||||
Sbjct 649 TGTGAAATACGGAACCCAGTGAGTGCCAGTCGCAGTGACCCAGTCACCCTGAATCTCCTCCCGAAGCTGCCCAT 722
Query 362 -------------------------------------------------------------------------- 361
Sbjct 723 CCCCTACATCACCATCAACAACTTAAACCCCAGGGAGAATAAGGATGTCTTAGCCTTCACCTGTGAACCTAAGA 796
Query 362 -------------------------------------------------------------------------- 361
Sbjct 797 GTGAGAACTACACCTACATTTGGTGGCTAAACGGTCAGAGCCTCCCCGTCAGTCCCGGGGTAAAGCGACCCATT 870
Query 362 -------------------------------------------------------------------------- 361
Sbjct 871 GAAAACAGGATACTCATTCTACCCAGTGTCACGAGAAATGAAACAGGACCCTATCAATGTGAAATACGGGACCG 944
Query 362 --------------------------------------------ATGGTCCAGACCTCCCCAGAATTTTCCCTT 391
||||||||||||||||||||||||.|||||
Sbjct 945 ATATGGTGGCCTCCGCAGTAACCCAGTCATCCTAAATGTCCTCTATGGTCCAGACCTCCCCAGAATTTACCCTT 1018
Query 392 CAGTCACCTCTTACTATTCAGGAGAGAACCTCGACTTGTCCTGCTTCGCAGACTCTAACCCACCAGCACAGTAT 465
||.||||||.||||..|||||||||.|||||||||||||||||||||.|.||.|||||||||||.|||.|||||
Sbjct 1019 CATTCACCTATTACCGTTCAGGAGAAAACCTCGACTTGTCCTGCTTCACGGAATCTAACCCACCGGCAGAGTAT 1092
Query 466 TCTTGGACAATTAATGGGAAGTTTCAGCTATCAGGACAAAAGCTCTTTATCCCTCAAATTACTCCAAAGCATAA 539
|.||||||||||||||||||||||||||.||||||||||||||||||||||||.|||||||||..|||.||||.
Sbjct 1093 TTTTGGACAATTAATGGGAAGTTTCAGCAATCAGGACAAAAGCTCTTTATCCCCCAAATTACTAGAAATCATAG 1166
Query 540 TGGGCTCTATGCTTGCTCTGCTCGTAACTCAGCCACTGGCGAGGAAAGCTCCACATCCTTGACAATCAGAGTC- 612
.|||||||||||||||||||.||.||||||||||||||||.||||||.|||||.||||.|||||.|||.||||
Sbjct 1167 CGGGCTCTATGCTTGCTCTGTTCATAACTCAGCCACTGGCAAGGAAATCTCCAAATCCATGACAGTCAAAGTCT 1240
Query 613 -------ATTGCTCCTCCAGGAT---------TAGGAACTTTT----------------GCTTTC----AATAA 650
.|.|.|| ||||.|| |||| .|||| |||||| ||.|.
Sbjct 1241 CTGGTAAGTGGATC--CCAGCATCCTTGGCAGTAGG--GTTTTATGTGGAGTCTATCTGGCTTTCAGAGAAGAG 1310
Query 651 TCCAACG------------------------------------------------------------------- 657
|| |.|
Sbjct 1311 TC--AGGAAAACATTTTTATTCCCAGCCTGTGTCCCATGGGCACAAGCAAATCCCAAATTCTCCTCCTGAACCC 1382
Query 658 -------------------------------------------------------------------------- 657
Sbjct 1383 TCCCAATTTGTCTCTACAGACTCTCTTCTCCTTGTTTTTCTGTTTTCTTATGGCTGACCTTGTGTCTGGCCTGA 1456
Query 658 ----------------------------- 657
Sbjct 1457 AAAAGGTAGGGAGGGGGCTTTATCAGCCC 1485
