Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_06818
Subject:
XM_011527190.1
Aligned Length:
3372
Identities:
2290
Gaps:
1068

Alignment

Query    1  ATGGCTGGGGCTGGCGGGGGCCTCGGGGTCTGGGGGAACCTGGTGCTGCTGGGCCTGTGCAGCTGGACAGGGGC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCTGGGGCTGGCGGGGGCCTCGGGGTCTGGGGGAACCTGGTGCTGCTGGGCCTGTGCAGCTGGACAGGGGC  74

Query   75  CAGGGCGCCT---------------------GCCCCCAACCCAGGGAGGAACCTGACAGTGGAGACTCAGACCA  127
            ||||||||||                     |||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CAGGGCGCCTGACCTTCCTTCCCAATTCTCAGCCCCCAACCCAGGGAGGAACCTGACAGTGGAGACTCAGACCA  148

Query  128  CCAGCTCCATCTCCCTGAGCTGGGAGGTCCCCGATGGCCTAGACTCACAGAACTCCAACTACTGGGTTCAGTGT  201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCAGCTCCATCTCCCTGAGCTGGGAGGTCCCCGATGGCCTAGACTCACAGAACTCCAACTACTGGGTTCAGTGT  222

Query  202  ACTGGAGACGGCGGCACAACAGAGACTCGAAACACAACAGCCACCAACGTCACCGTGGATGGCCTTGGACCCGG  275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ACTGGAGACGGCGGCACAACAGAGACTCGAAACACAACAGCCACCAACGTCACCGTGGATGGCCTTGGACCCGG  296

Query  276  GTCATTGTATACGTGTTCTGTGTGGGTGGAGAAAGACGGAGTAAATAGCTCTGTGGGGACTGTCACTACTGCCA  349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GTCATTGTATACGTGTTCTGTGTGGGTGGAGAAAGACGGAGTAAATAGCTCTGTGGGGACTGTCACTACTGCCA  370

Query  350  CAGCTCCCAACCCAGTGAGGAACCTGAGAGTGGAGGCTCAGACCAACAGCTCCATCGCCCTGACCTGGGAGGTC  423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CAGCTCCCAACCCAGTGAGGAACCTGAGAGTGGAGGCTCAGACCAACAGCTCCATCGCCCTGACCTGGGAGGTC  444

Query  424  CCCGACGGCCCAGACCCACAGAACTCCACCTACGGGGTTGAGTACACTGGAGATGGTGGCAGAGCAGGGACTCG  497
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCCGACGGCCCAGACCCACAGAACTCCACCTACGGGGTTGAGTACACTGGAGATGGTGGCAGAGCAGGGACTCG  518

Query  498  AAGCACAGCACACACCAACATCACCGTGGATGGACTTGAACCCGGGTGTTTGTATGCGTTTTCCATGTGGGTGG  571
            |||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AAGCACAGCACACACTAACATCACCGTGGATGGACTTGAACCCGGGTGTTTGTATGCGTTTTCCATGTGGGTGG  592

Query  572  GAAAGAATGGAATCAACAGCTCCCGGGAGACTCGAAATGCCACCACAGCTCACAACCCAGTGAGGAACCTGAGA  645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GAAAGAATGGAATCAACAGCTCCCGGGAGACTCGAAATGCCACCACAGCTCACAACCCAGTGAGGAACCTGAGA  666

Query  646  GTGGAGGCTCAGACCACCAGCTCCATCTCCCTGAGCTGGGAGGTCCCCGATGGCACAGACCCACAGAACTCCAC  719
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  667  GTGGAGGCTCAGACCACCAGCTCCATCTCCCTGAGCTGGGAGGTCCCCGATGGCACAGACCCACAGAACTCGAC  740

Query  720  CTACTGCGTTCAGTGCACTGGAGATGGTGGCAGAACAGAGACTCGAAACACAACAGACACCAGAGTCACCGTGG  793
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTACTGCGTTCAGTGCACTGGAGATGGTGGCAGAACAGAGACTCGAAACACAACAGACACCAGAGTCACCGTGG  814

Query  794  ATGGCCTTGGACCCGGGTCATTGTATACGTGTTCTGTGTGGGTGGAGAAAGACGGAGTAAATAGCTCTGTGGAG  867
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATGGCCTTGGACCCGGGTCATTGTATACGTGTTCTGTGTGGGTGGAGAAAGACGGAGTAAATAGCTCTGTGGAG  888

Query  868  ATTGTCACTAGTGCCACAGCTCCCAACCCAGTGAGAAACCTGACAGTGGAGGCTCAGACCAACAGCTCCATCGC  941
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ATTGTCACTAGTGCCACAGCTCCCAACCCAGTGAGAAACCTGACAGTGGAGGCTCAGACCAACAGCTCCATCGC  962

Query  942  CCTGACCTGGGAGGTCCCCGATGGCCCAGACCCACAGAACTCCACCTACGGGGTTGAGTACACTGGAGATGGTG  1015
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCTGACCTGGGAGGTCCCCGATGGCCCAGACCCACAGAACTCCACCTACGGGGTTGAGTACACTGGAGATGGTG  1036

Query 1016  GCAGAGCAGGGACTCGAAGCACAGCATACACCAACATCACCGTGGATAGACTTGAACCCGGGTGTTTGTATGTG  1089
            ||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GCAGAGCAGGGACTCGAAGCACAGCACACACCAACATCACCGTGGATAGACTTGAACCCGGGTGTTTGTATGTG  1110

Query 1090  TTTTCCGTGTGGGTGGGGAAGAATGGAATCAACAGCTCCCGGGAGACTCGAAATGCCACCACAGCCCCCAACCC  1163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TTTTCCGTGTGGGTGGGGAAGAATGGAATCAACAGCTCCCGGGAGACTCGAAATGCCACCACAGCCCCCAACCC  1184

Query 1164  AGTGAGAAACCTCCATATGGAGACTCAGACCAACAGCTCCATCGCCCTATGCTGGGAAGTCCCCGATGGCCCAT  1237
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGTGAGAAACCTCCATATGGAGACTCAGACCAACAGCTCCATCGCCCTATGCTGGGAAGTCCCCGATGGCCCAT  1258

Query 1238  ACCCTCAGGACTACACCTACTGGGTAGAGTACACTGGAGACGGTGGTGGCACAGAGACCCGAAACACAACAAAT  1311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  ACCCTCAGGACTACACCTACTGGGTAGAGTACACTGGAGACGGTGGTGGCACAGAGACCCGAAACACAACAAAT  1332

Query 1312  ACCAGTGTGACAGCTGAGAGACTTGAGCCCGGAACCTTGTACACATTCTCTGTATGGGCAGAAAAAAATGGAGC  1385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  ACCAGTGTGACAGCTGAGAGACTTGAGCCCGGAACCTTGTACACATTCTCTGTATGGGCAGAAAAAAATGGAGC  1406

Query 1386  ACGTGGCTCCAGGCAGAATGTCAGCATCTCCACAGTCCCCAACGCAGTGACAAGCCTCAGCAAGCAGGACTGGA  1459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  ACGTGGCTCCAGGCAGAATGTCAGCATCTCCACAGTCCCCAACGCAGTGACAAGCCTCAGCAAGCAGGACTGGA  1480

Query 1460  CCAACAGCACCATTGCTTTGCGCTGGACAGCTCCCCAGGGCCCAGGCCAGTCTTCCTACAGCTACTGGGTCTCA  1533
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CCAACAGCACCATTGCTTTGCGCTGGACAGCTCCCCAGGGCCCAGGCCAGTCTTCCTACAGCTACTGGGTCTCA  1554

Query 1534  TGGGTCAGGGAAGGCATGACTGACCCCAGGACCCAAAGCACCTCAGGTACTGACATCACCCTAAAGGAACTGGA  1607
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TGGGTCAGGGAAGGCATGACTGACCCCAGGACCCAAAGCACCTCAGGTACTGACATCACCCTAAAGGAACTGGA  1628

Query 1608  AGCTGGCAGCCTGTACCACCTCACCGTCTGGGCCGAGAGGAATGAGGTCAGAGGCTATAACAGCACCCTCACTG  1681
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AGCTGGCAGCCTGTACCACCTCACCGTCTGGGCCGAGAGGAATGAGGTCAGAGGCTATAACAGCACCCTCACTG  1702

Query 1682  CAGCCACTGCTCCCAATGAGGTCACAGATCTCCAGAATGAAACTCAGACTAAGAACTCAGTCATGCTGTGGTGG  1755
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CAGCCACTGCTCCCAATGAGGTCACAGATCTCCAGAATGAAACTCAGACTAAGAACTCAGTCATGCTGTGGTGG  1776

Query 1756  AAGGCCCCTGGAGACCCCCACTCTCAGTTGTACGTATACTGGGTCCAGTGGGCCAGCAAGGGACATCCCCGGAG  1829
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AAGGCCCCTGGAGACCCCCACTCTCAGTTGTACGTATACTGGGTCCAGTGGGCCAGCAAGGGACATCCCCGGAG  1850

Query 1830  GGGGCAAGATCCCCAAGCGAATTGGGTCAACCAGACCAGCAGGACCAATGAGACGTGGTACAAAGTGGAGGCCC  1903
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GGGGCAAGATCCCCAAGCGAATTGGGTCAACCAGACCAGCAGGACCAATGAGACGTGGTACAAAGTGGAGGCCC  1924

Query 1904  TGGAACCCGGGACGCTGTACAATTTCACCGTGTGGGCAGAGAGGAATGACGTAGCCAGTTCCACGCAGAGCCTC  1977
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  TGGAACCCGGGACGTTGTACAATTTCACCGTGTGGGCAGAGAGGAATGACGTAGCCAGTTCCACGCAGAGCCTC  1998

Query 1978  TGTGCGTCCACATACCCAGACACAGTCACCATCACTTCCTGTGTCAGCACCTCAGCGGGCTATGGAGTCAACTT  2051
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  TGTGCGTCCACATACCCAGACACAGTCACCATCACTTCCTGTGTCAGCACCTCAGCGGGCTATGGAGTCAACTT  2072

Query 2052  GATCTGGTCCTGCCCCCAGGGAGGCTACGAGGCCTTTGAGTTGGAGGTGGGAGGACAGCGGGGCTCCCAGGACA  2125
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  GATCTGGTCCTGCCCCCAGGGAGGCTACGAGGCCTTTGAGTTGGAGGTGGGAGGACAGCGGGGCTCCCAGGACA  2146

Query 2126  GATCTTCATGTGGGGAGGCTGTGTCTGTGTTGGGTCTCGGGCCGGCTCGGTCCTACCCAGCCACCATCACGACC  2199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  GATCTTCATGTGGGGAGGCTGTGTCTGTGTTGGGTCTCGGGCCGGCTCGGTCCTACCCAGCCACCATCACGACC  2220

Query 2200  ATCTGGGACGGAATGAAGGTCGTGTCTCACTCTGTGGTCTGCCACACCGAGAGTGCAGGGGTCATTGCCG-GAG  2272
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||.| ||.
Sbjct 2221  ATCTGGGACGGAATGAAGGTCGTGTCTCACTCTGTGGTCTGCCACACCGAGAGTGCAGG----ATTGCTGAGAA  2290

Query 2273  CCTTTGTGGGCATCCTCCTGTTTCTCATCCTCGTGGGCCT-----GCTGATTTTCTTCCTGAAGAGGAGGAATA  2341
            .||      |||                .||.|.||||||     |||||         ||||||.|.|..|  
Sbjct 2291  GCT------GCA----------------GCTTGGGGGCCTTCAAGGCTGA---------TGAAGATGGGCCA--  2331

Query 2342  AGAAGAAGCAGCAGAAACCAGAACTCAGGGATCTGGTCTTTAGCTCCCCAGGGGACATCCCAGCTGAAGACTTC  2415
                                                                                      
Sbjct 2332  --------------------------------------------------------------------------  2331

Query 2416  GCTGACCACGTCAGGAAGAATGAGAGGGACAGCAACTGTGGTTTTGCAGACGAGTACCAGCAACTCTCCCTGGT  2489
                                                                                      
Sbjct 2332  --------------------------------------------------------------------------  2331

Query 2490  GGGCCACAGCCAGTCTCAGATGGTGGCTTCGGCTTCAGAGAACAACGCCAAGAACCGCTACAGAAATGTGCTGC  2563
                                                                                      
Sbjct 2332  --------------------------------------------------------------------------  2331

Query 2564  CCTATGACTGGTCCCGGGTGCCCCTGAAGCCCATCCATGAGGAGCCAGGCTCTGACTACATCAATGCCAGCTTC  2637
                                                                                      
Sbjct 2332  --------------------------------------------------------------------------  2331

Query 2638  ATGCCCGGTCTCTGGAGCCCCCAGGAGTTCATTGCAACCCAGGGTCCCCTGCCACAGACAGTGGGTGACTTCTG  2711
                                                                                      
Sbjct 2332  --------------------------------------------------------------------------  2331

Query 2712  GCGCCTGGTGTGGGAACAGCAGAGCCACACCCTGGTCATGCTGACCAACTGCATGGAGGCCGGCCGGGTGAAGT  2785
                                                                                      
Sbjct 2332  --------------------------------------------------------------------------  2331

Query 2786  GTGAGCATTACTGGCCTCTGGACTCGCAGCCCTGCACCCATGGGCACCTGCGGGTAACCCTGGTAGGTGAGGAA  2859
                                                                                      
Sbjct 2332  --------------------------------------------------------------------------  2331

Query 2860  GTGATGGAGAACTGGACGGTGCGGGAACTGCTGCTCCTCCAGGTGGAGGAGCAGAAGACACTGTCTGTGCGCCA  2933
                                                                                      
Sbjct 2332  --------------------------------------------------------------------------  2331

Query 2934  ATTCCACTACCAGGCCTGGCCGGATCACGGCGTTCCCTCCTCCCCAGACACCTTGCTGGCTTTCTGGAGGATGC  3007
                                                                                      
Sbjct 2332  --------------------------------------------------------------------------  2331

Query 3008  TTCGGCAGTGGCTGGATCAGACCATGGAGGGAGGCCCACCCATTGTGCACTGCAGTGCTGGCGTGGGTCGCACA  3081
                                                                                      
Sbjct 2332  --------------------------------------------------------------------------  2331

Query 3082  GGAACCCTCATTGCCCTGGACGTCCTGCTCCGGCAGCTGCAGTCCGAGGGTCTCCTTGGGCCCTTCAGCTTTGT  3155
                                                                                      
Sbjct 2332  --------------------------------------------------------------------------  2331

Query 3156  AAGGAAGATGAGAGAGAGTCGGCCGTTGATGGTGCAGACTGAGGCTCAGTACGTATTCCTGCATCAGTGCATCC  3229
                                                                                      
Sbjct 2332  --------------------------------------------------------------------------  2331

Query 3230  TGCGGTTCCTCCAACAGTCAGCCCAGGCCCCAGCCGAGAAGGAAGTCCCGTATGAGGATGTCGAAAACCTCATC  3303
                                                                                      
Sbjct 2332  --------------------------------------------------------------------------  2331

Query 3304  TACGAGAACGTGGCCGCCATCCAGGCCCACAAGTTGGAGGTC  3345
                                                      
Sbjct 2332  ------------------------------------------  2331

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