Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06926
- Subject:
- XR_002956167.1
- Aligned Length:
- 5279
- Identities:
- 1912
- Gaps:
- 3333
Alignment
Query 1 -----------------------------------------------ATGTCGGGGGTCCGGGGCCTGTCGCGG 27
|||||||||||||||||||||||||||
Sbjct 1 GCAGTCTGCGCAGGGACTGGCGGGACTGCGCGGCGGCAACAGCAGACATGTCGGGGGTCCGGGGCCTGTCGCGG 74
Query 28 CTGCTGAGCGCTCGGCGCCTGGCGCTGGCCAAGGCGTGGCCAACAGTGTTGCAAACAGGAACCCGAGGTTTTCA 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTGCTGAGCGCTCGGCGCCTGGCGCTGGCCAAGGCGTGGCCAACAGTGTTGCAAACAGGAACCCGAGGTTTTCA 148
Query 102 CTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGATTCCATTTCTGCTCAGTATCCAGTAGTGG 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGATTCCATTTCTGCTCAGTATCCAGTAGTGG 222
Query 176 ATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGCTTGCGAGCTGCATTTGGCCTTTCTGAGGCA 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGCTTGCGAGCTGCATTTGGCCTTTCTGAGGCA 296
Query 250 GGGTTTAATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCACAGGGAGGAATCAA 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGGTTTAATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCACAGGGAGGAATCAA 370
Query 324 TGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAGGGCTCCGACTGGC 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAGGGCTCCGACTGGC 444
Query 398 TGGGGGACCAGGATGCCATCCACTACATGACGGAGCAGGCCCCCGCCGCCGTGGTCGAGCTAGAAAATTATGGC 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGGGGGACCAGGATGCCATCCACTACATGACGGAGCAGGCCCCCGCCGCCGTGGTCGAGCTAGAAAATTATGGC 518
Query 472 ATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGTGGACAGAGCCTCAAGTTTGGAAA 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGTGGACAGAGCCTCAAGTTTGGAAA 592
Query 546 GGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACTGGCCACTCGCTATTGCACACCTTATATGGAA 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACTGGCCACTCGCTATTGCACACCTTATATGGAA 666
Query 620 GGTCTCTGCGATATGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAATGGGGAGTGC 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGTCTCTGCGATATGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAATGGGGAGTGC 740
Query 694 CGTGGTGTCATCGCACTGTGCATAGAGGACGGGTCCATCCATCGCATAAGAGCAAAGAACACTGTTGTTGCCAC 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CGTGGTGTCATCGCACTGTGCATAGAGGACGGGTCCATCCATCGCATAAGAGCAAAGAACACTGTTGTTGCCAC 814
Query 768 AGGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCTGCCCACACCAGCACTGGCGACGGCACGGCCATGATCA 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCTGCCCACACCAGCACTGGCGACGGCACGGCCATGATCA 888
Query 842 CCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTTGTTCAGTTCCACCCCACAGGCATATATGGTGCTGGTTGT 915
|||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 889 CCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTTGTTCAGTTCCACCCTACAGGCATATATGGTGCTGGTTGT 962
Query 916 CTCATTACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATA 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTCATTACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATA 1036
Query 990 CGCCCCTGTCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTCCATGACTCTGGAGATCCGAGAAGGAA 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CGCCCCTGTCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTCCATGACTCTGGAGATCCGAGAAGGAA 1110
Query 1064 GAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTACCTCCAGAGCAGCTGGCCACGCGC 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTACCTCCAGAGCAGCTGGCCACGCGC 1184
Query 1138 CTGCCTGGCATTTCAGAGACAGCCATGATCTTCGCTGGCGTGGACGTCACGAAGGAGCCGATCCCTGTCCTCCC 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTGCCTGGCATTTCAGAGACAGCCATGATCTTCGCTGGCGTGGACGTCACGAAGGAGCCGATCCCTGTCCTCCC 1258
Query 1212 CACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTCCTGAGGCACGTGAATGGCCAGG 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTCCTGAGGCACGTGAATGGCCAGG 1332
Query 1286 ATCAGATTGTGCCCGGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGGTGCCAACCGCCTCGGG 1359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATCAGATTGTGCCCGGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGGTGCCAACCGCCTCGGG 1406
Query 1360 GCAAACTCGCTCTTGGACCTGGTTGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAGAGTCATGCAGGCCTGG 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCAAACTCGCTCTTGGACCTGGTTGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAGAGTCATGCAGGCCTGG 1480
Query 1434 AGATAAAGTCCCTCCAATTAAACCAAACGCTGGGGAAGAATCTGTCATGAATCTTGACAAATTGAGATTTGCTG 1507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AGATAAAGTCCCTCCAATTAAACCAAACGCTGGGGAAGAATCTGTCATGAATCTTGACAAATTGAGATTTGCTG 1554
Query 1508 ATGGAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAAGTCAATGCAAAATCATGCTGCCGTGTTCCGT 1581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ATGGAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAAGTCAATGCAAAATCATGCTGCCGTGTTCCGT 1628
Query 1582 GTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCAGCAAGCTCTATGGAGACCTAAAGCACCTGAAGACGTT 1655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCAGCAAGCTCTATGGAGACCTAAAGCACCTGAAGACGTT 1702
Query 1656 CGACCGGGGAATGGTCTGGAACACGGACCTGGTGGAGACCCTGGAGCTGCAGAACCTGATGCTGTGTGCGCTGC 1729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CGACCGGGGAATGGTCTGGAACACGGACCTGGTGGAGACCCTGGAGCTGCAGAACCTGATGCTGTGTGCGCTGC 1776
Query 1730 AGACCATCTACGGAGCAGAGGCACGGAAGGAGTCACGGGGCGCGCATGCCAGGGAAGACTACAAGGTGCGGATT 1803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|..||
Sbjct 1777 AGACCATCTACGGAGCAGAGGCACGGAAGGAGTCACGGGGCGCGCATGCCAGGGAAGACTACAAGGTGGGCCTT 1850
Query 1804 GATGAGTACGATTACT--CCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTT----TGAGGAGCA-CTGGAGGA 1870
|| |||.|||||.| .|||.|.| |||| || .|| ||||.||.
Sbjct 1851 --------------CTCACCACGCCCACC----TGCACCTG-------CCTTTTCCTG----CCACCTGGTGGG 1895
Query 1871 AGCACA-------CCCTG--TCCTATGTGGA--------CGTTGGCACTGGGAAGGTCACTCTGGAATATAG-- 1925
| |.|| ||||| |..|.|.||.| |||||.|.| .||.||.|.||...||.|| |
Sbjct 1896 A-CTCAGCCCCACCCCTGCATTTTCTCTGCATTTTCTTTCGTTGCCCC---AAAAGTAAATCCAAAAAAT-GCC 1964
Query 1926 ------ACCCGTGATCGACAAAACTTTGAAC---GAGG-------------CTG----ACTGTGCCACC----- 1968
.|||.||.| ||||||||.| | || ||| |||||| |||
Sbjct 1965 TTTTTCCCCCCTGGT------AACTTTGATCCCTG-GGTTCTCGCCATCTTCTGGATCACTGTG--ACCTTTTC 2029
Query 1969 ----------GTC-----CC------GCCAGC-----CATTCGCTCCTAC------------------------ 1992
||| || |||||| ||| ||||.|.
Sbjct 2030 CTTGCTTTGGGTCGGCATCCACTGATGCCAGCAGTGGCAT---CTCCAAGCCAATGTGCTTTGCTGTTAGAAGG 2100
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 2101 CCAAGGTTAGAAGTGCAGCTAGAGTGGCAAGACCAGGAAATAAATGCCAGTTTATTAAATAACGAGTAAGCCAT 2174
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 2175 CATTTCAAGCCTGCCCTGTGGAGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAAACCTGCCCT 2248
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 2249 GTGGAGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAAACCTGCCCTGTGGAGGAAATGCCAGT 2322
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 2323 TTATTAAATAACGAGTAAGCCACCGTTTCAAGCCTGCCCTGTGGAGGAAATGCCAGTTTATTAAATAACGAGTA 2396
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 2397 AGCCACCGTTTCAGACCTGCCCTGTGGTGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACTGTTTCAAACC 2470
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 2471 TGCCCTGTGGAGGAAATGCCAGTTTATTAACGAGTAAGTCACTGTTTCAAACCTGTCCTGTGGAGGAAATGCCA 2544
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 2545 GTTTATTAACGAATAAGCCACCGTTTCAAACCTGCCCTGTGAAGGAAATGCCAGTTTATTAAATAAGGAGTAAG 2618
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 2619 CCACCGTTTCAAGCCTGCCCTGTGGAGGAAATGCCCGTTTATTAAATAACGAGTAAGCCACCGTTTCAAGCCTG 2692
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 2693 CCCTGTGGAGGAAATGCCCGTTTATTAAATAAGGAGTAAGCCACCATTTCAAGCCTGCCCTGTGGAGGAAATGC 2766
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 2767 CAGTTTATTAAATAACGAGTAAGCCACCGTTTCAAGCCTGCCCTGTGGAGGAAATGCCAGTTTATTAAATAACG 2840
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 2841 AGTAAGCCACCATTTCAAACCTGCCCTGTGGAGGAAATGCCAGTTTATTAACGAGTAAGTCACCGTTTCAAACC 2914
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 2915 TGCCCTGTGGAGGAAATGCCAGTTTAGTAACGAGTAAGTCACCGTTTTAAGCCTGTCCTGTGGAGGAAATGCCA 2988
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 2989 GTTTATTAACGAGTAAGCCACCGTTTCAAACCTGCCCTGTGGAGGAAGTGCCAGTTTATTAAATAATGAGTAAG 3062
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 3063 TCACCGTTTCAAGCCTGCCCTGTGGAGGAAATGCCAGTTTATTAAATAACGAGTAAGTCACCGTTTCATACCTG 3136
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 3137 CCCTGTGGAGGAAATGCCAGTTTATTAACGAGTAAGCCACCGTTTCAGACCTGCCCTGTGGAGGAAAATGCCAG 3210
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 3211 TTTATTAACAAGTAAGTCACTGTTTCAGACCTGCCCTGTGGATGAAATGCCAGTTTATTAATGAGTAAGTCACC 3284
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 3285 ATTTCAGACCTGCGCTGTGGAGGAAATGCCAGTTTATTAAATAAGGAGTAAGCCACCATTTCAGACCTGTCCTG 3358
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 3359 TGGTTTGGAAAAGGTATTATAGAGCCTGCCCTGTGGTCACTTGTTCTTCAGATGAACTGATTTTTGTGCAGAGC 3432
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 3433 GCACGTGTTGGATTCTGCCTGGTAAGAGTTTTTCCCATATGATAGCAAAAAACGACGGAAAGGGAAGCTTGGGA 3506
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 3507 TGCAAATGCAAGTTCAGGATAAACCACATCAGCAAAAGGACAAAGGCTCCACAAGGCAGGCGCACAGGCTGGTT 3580
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 3581 CAGGACCGTGTGTAGGCGGCTGGTGGCAGCCTTTCCAGTCAGCTGAACATGGTGAATGGGAAAATCATTTTTAT 3654
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 3655 TCACCATGAAATTTTACTGATTTACCCTCCACTAGAATATGCTGATGGCTGTGATCACTGCTCAGAACTTGCTC 3728
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 3729 TTGTCTCCTTGTATGTATTAAGAGTTTCCTGCAAAGTATATGAATCCGTGTTTGCCAGAATACAGAATAATAGT 3802
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 3803 AAATTTATTATTTTTATTTTTATTTTTTTGAGAAGGAATCTCACTGTCCCCCAGGCTGGAGTGCAGTGGCGTGA 3876
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 3877 TCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGCAGCTGGGATT 3950
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 3951 ACAGACACACTGCCACCATGCCTAATTTTGTATTTTCAGTAGAGATGGGGTTTCACCATATTGGCCGGGCTGGT 4024
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 4025 CTCGAACTCCTGACCTCAAGTGAACCACCCACCTCGGCCTCCCAAAGTGCTAGGGTTACAGGCATGAGCCACTG 4098
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 4099 TGCCTGGCCAGTGCATAAATTTAGTTGGTCACAGTCAGTTTTAATTAGAATAGAAGCCAGGTGCAGTGCCTCAC 4172
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 4173 ACCTGTAATCCCAGCATTTGGGAGGCTGAGGCAGGCCAATGACTTGAGCCCCAGAGTTGTAGACCAGCCTGGGC 4246
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 4247 AACATGGCGAAACGTGTCTCTACAAAAACATAAAAAATGAGCCAGGTGTGGTGGTAGCACAGGAGGCTGAGGCA 4320
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 4321 GGAGGATTGATTGAGCCTGGGAAGTCAAGGCTCCGGCAAGCTGTGATCACACCACTGCACTCCAGCCCAGGTGA 4394
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 4395 CATAGCCAGACCCTGTCTCAAAAAAAAAATTTTTTTTTAATAAAAACAGGCTGAAAGAAAAGATTGAGGTAGTC 4468
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 4469 TCCCAGCACATGGAGCAAAAAGACAAAGTATTTGATAAACTCTTAGGTACATAAAGGATGCTTAAGGGAACATG 4542
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 4543 CGGACATGGATTACTGTGGACTCACTGCTGGCTGCACACCCCCTGGCCAGCCATGCGGCCTCCGTGGGTTCTGA 4616
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 4617 ACATGTTGATGGTGCCAACCTCCTGGGCTGAAGTGGAAATGGAATGAGTTCTAGGGCATCTGTCTCTTAGATCA 4690
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 4691 TGTTAATGTCTGCTGTGTTTTTTCTGTATTGCTCTGTTAGAGTAATAAGAAACGTGATGGTGTTTCTGGCCTCA 4764
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 4765 GGTGCGGATTGATGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGAGCACTGGA 4838
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 4839 GGAAGCACACCCTGTCCTATGTGGACGTTGGCACTGGGAAGGTCACTCTGGAATATAGACCCGTGATCGACAAA 4912
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 4913 ACTTTGAACGAGGCTGACTGTGCCACCGTCCCGCCAGCCATTCGCTCCTACTGATGAGACAAGATGTGGTGATG 4986
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 4987 ACAGAATCAGCTTTTGTAATTATGTATAATAGCTCATGCATGTGTCCATGTCATAACTGTCTTCATACGCTTCT 5060
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 5061 GCACTCTGGGGAAGAAGGAGTACATTGAAGGGAGATTGGCACCTAGTGGCTGGGAGCTTGCCAGGAACCCAGTG 5134
Query 1993 -------------------------------------------------------------------------- 1992
Sbjct 5135 GCCAGGGAGCGTGGCACTTACCTTTGTCCCTTGCTTCATTCTTGTGAGATGATAAAACTGGGCACAGCTCTTAA 5208
Query 1993 ------------------------- 1992
Sbjct 5209 ATAAAATATAAATGAACAAACTTTC 5233
