Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06931
- Subject:
- XR_379759.3
- Aligned Length:
- 2993
- Identities:
- 1405
- Gaps:
- 1408
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGCGCTCCGCGCGCGGCTCCGAGCGTCCCGTCCCGCCAGCGGCCTCGAGACCTGAGCAGCTAGGGAACAAACC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCAGCGGTCCAGGGAGCCCCGAGCGCAGCGTAGAGCCAGGGTACGCTTCGAGGACCCGCGCAGCCCCGCTCGGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCCGGGCCCTAGTCAGACAGCCAGGCAAGCGCAGCGCCACCCGGCCGAGCCCAGCGCAGCGCTCTGTAGCCTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCGCGCGCCACCGCCCGCGCCCCGCACCGGGGAATGCGCCCTCGGCGCGCAGGCCAGGGGGCGCCCGCAGCCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCCGGGGGAGGCGGCCCCGAGCGCCCCTGAGCCTTTCCATGGCCCGGGCTAGGGCCCGGGGCCTCGGCTGCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACGTGCACGAAGCCAGGGGACCCAGTGAAGCCGAGTCCGCGGTGCGGATCCCGGCTCAGGCTAAGAGACAAGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGCGCGGACAGGGCCGTGGCCCGGGGGGGGGGCAGCTAAAGCGGACCGGCCGGACGCGAACCTCTCCGCTGCTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGGCGGCCACCGCTGCCCGGGCGCCCAGGCCCCGCCGCCGTGGACGAGGTGTCCACAGAACTGGAGCCTGCTTC 592
Query 1 -----------------------ATGCTTGTCGCCGGTCTTC-TTCTCTGGGCTTCCCTACTGACCGGGGCCTG 50
||||||||| .|.|.|||| |.||||||||||||||.||||||||||||||
Sbjct 593 CTGGGCCCCAGGCCCCTCCCACGATGCTTGTC-ACTGCCTTCATCCTCTGGGCTTCCCTGCTGACCGGGGCCTG 665
Query 51 GCCATCCTTCCCC-ACCCAGGACCACCTCCCGGCCACGCCCCGGGTCCGGCTCTCATTCAAAGAGCTGAAGGCC 123
||| |.||.|||| |.|||||||||.||.||.|||||.||..|.|||||.||.|||||||||||.||.||||||
Sbjct 666 GCC-TGCTACCCCTATCCAGGACCAGCTTCCAGCCACACCTAGAGTCCGACTGTCATTCAAAGAACTTAAGGCC 738
Query 124 ACAGGCACCGCCCACTTCTTCAACTTCCTGCTCAACACAACCGACTACCGAATCTTGCTCAAGGACGAGGACCA 197
||.||.||||||||||||||||||||.|||||||||||.||.||||||.|||||.||||||||||.||||||||
Sbjct 739 ACCGGTACCGCCCACTTCTTCAACTTTCTGCTCAACACTACAGACTACAGAATCCTGCTCAAGGATGAGGACCA 812
Query 198 CGACCGCATGTACGTGGGCAGCAAGGACTACGTGCTGTCCCTGGACCTGCACGACATCAACCGCGAGCCCCTCA 271
.|||||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||||.|
Sbjct 813 TGACCGCATGTATGTGGGCAGCAAGGACTACGTGCTGTCCCTGGACCTGCATGACATCAACCGAGAGCCCCTTA 886
Query 272 TTATACACTGGGCAGCCTCCCCACAGCGCATCGAGGAATGCGTGCTCTCAGGCAAGGATGTCAACGGCGAGTGT 345
||||.||.||||||||||||||.||||||||.|||||.|||.|.||.|||||||||||||.|||.||.||||||
Sbjct 887 TTATCCATTGGGCAGCCTCCCCGCAGCGCATTGAGGAGTGCATACTGTCAGGCAAGGATGGCAATGGAGAGTGT 960
Query 346 GGGAACTTCGTCAGGCTCATCCAGCCCTGGAACCGAACACACCTGTATGTGTGCGGGACAGGTGCCTACAACCC 419
||.|||||||||.|||||||||||||.||||||||||||||||||||||||||.|||||.||||||||||||||
Sbjct 961 GGTAACTTCGTCCGGCTCATCCAGCCTTGGAACCGAACACACCTGTATGTGTGTGGGACCGGTGCCTACAACCC 1034
Query 420 CATGTGCACCTATGTGAACCGCGGACGCCGCGCCCAGGCCACACCATGGACCCAGACTCAGGCGGTCAGAGGCC 493
|||||||||||||||||||||.||.||.|||||.||||||..|||.||||||||||..||||.|||||||||||
Sbjct 1035 CATGTGCACCTATGTGAACCGTGGCCGTCGCGCACAGGCCCTACCGTGGACCCAGATGCAGGTGGTCAGAGGCC 1108
Query 494 GCGGCAGCAGAGCCACGGATGGTGCCCTCCGCCCGATGCCCACAGCCCCACGCCAGGATTACATCTTCTACCTG 567
|.||||||||.|||||.|||||||||..||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1109 GAGGCAGCAGGGCCACCGATGGTGCCGACCGCCCGACGCCCACAGCCCCACGCCAGGATTACATCTTCTACCTG 1182
Query 568 GAGCCTGAGCGACTCGAGTCAGGGAAGGGCAAGTGTCCGTACGATCCCAAGCTGGACACAGCATCGGCCCTCAT 641
|||||||||..|||.||||||||.||.|||||.|||||.||.||.|||||||||||||||||.||.||||||||
Sbjct 1183 GAGCCTGAGAAACTGGAGTCAGGAAAAGGCAAATGTCCCTATGACCCCAAGCTGGACACAGCCTCAGCCCTCAT 1256
Query 642 CAATGAGGAGCTCTATGCTGGTGTGTACATCGATTTTATGGGCACTGATGCAGCCATCTTCCGCACACTTGGAA 715
|||||||||.||||||||.||.||||||||||||||||||||.||.|||||||||||.||||||||.||.||.|
Sbjct 1257 CAATGAGGAACTCTATGCAGGAGTGTACATCGATTTTATGGGTACCGATGCAGCCATTTTCCGCACGCTGGGGA 1330
Query 716 AGCAGACAGCCATGCGCACGGATCAGTACAACTCCCGGTGGCTGAACGACCCGTCGTTCATCCATGCTGAGCTC 789
|||||||||||||||||||.|||||||||||||||||||||||.||.||.||.||.|||||.||||||||||||
Sbjct 1331 AGCAGACAGCCATGCGCACAGATCAGTACAACTCCCGGTGGCTCAATGATCCTTCCTTCATACATGCTGAGCTC 1404
Query 790 ATTCCTGACAGTGCGGAGCGCAATGATGATAAGCTTTACTTCTTCTTCCGTGAGCGGTCGGCAGAGGCGCCGCA 863
||.|||||||||||.|||||||||||.|||||.||.||||||||||||||.|||||.||||||||||||||.||
Sbjct 1405 ATCCCTGACAGTGCAGAGCGCAATGACGATAAACTCTACTTCTTCTTCCGAGAGCGCTCGGCAGAGGCGCCACA 1478
Query 864 GAGCCCCGCGGTGTACGCCCGCATCGGGCGCATTTGCCTGAACGATGACGGTGGTCACTGTTGCCTGGTCAACA 937
||.|||.||.|||||.|||||||||||||||||.|||||.||||||||||||||.||.||.|||||||||||||
Sbjct 1479 GAACCCTGCTGTGTATGCCCGCATCGGGCGCATCTGCCTCAACGATGACGGTGGCCATTGCTGCCTGGTCAACA 1552
Query 938 AGTGGAGCACATTCCTGAAGGCGCGGCTCGTCTGCTCTGTCCCGGGCGAGGATGGCATTGAGACTCACTTTGAT 1011
||||||||||||||||||||||.||||||||||||||.||.||.|||||||||||.||||||||.|||||.||.
Sbjct 1553 AGTGGAGCACATTCCTGAAGGCTCGGCTCGTCTGCTCCGTGCCAGGCGAGGATGGTATTGAGACCCACTTCGAC 1626
Query 1012 GAGCTCCAGGACGTGTTTGTCCAGCAGACCCAGGACGTGAGGAACCCTGTCATTTACGCTGTCTTTACCTCCTC 1085
||.||||||||.||||||||||||||||||||||||||.||||||||.||||||||.||||||||||||||.||
Sbjct 1627 GAACTCCAGGATGTGTTTGTCCAGCAGACCCAGGACGTCAGGAACCCAGTCATTTATGCTGTCTTTACCTCTTC 1700
Query 1086 TGGCTCCGTGTTCCGAGGCTCTGCCGTGTGTGTCTACTCCATGGCTGATATTCGCATGGTCTTCAACGGGCCCT 1159
.|||||.|||||||||||.|||||.||||||||||||||||||||||||||.||||||||||||||.|||||.|
Sbjct 1701 AGGCTCTGTGTTCCGAGGGTCTGCAGTGTGTGTCTACTCCATGGCTGATATCCGCATGGTCTTCAATGGGCCTT 1774
Query 1160 TTGCCCACAAAGAGGGGCCCAACTACCAGTGGATGCCCTTCTCAGGGAAGATGCCCTACCCACGGCCGGGCACG 1233
||||.|||||.|||||.||||||||.||.|||||||||||||||||.|||||||||||.||.|||||.|||||.
Sbjct 1775 TTGCTCACAAGGAGGGCCCCAACTATCAATGGATGCCCTTCTCAGGAAAGATGCCCTATCCTCGGCCTGGCACA 1848
Query 1234 TGCCCTGGTGGAACCTTCACGCCATCTATGAAGTCCACCAAGGATTATCCTGATGAGGTGATCAACTTCATGCG 1307
|||||||||||||||||||||||.||.|||||||||||.|||||.||.||||||||.|||||||||||||||||
Sbjct 1849 TGCCCTGGTGGAACCTTCACGCCCTCGATGAAGTCCACTAAGGACTACCCTGATGAAGTGATCAACTTCATGCG 1922
Query 1308 CAGCCACCCACTCATGTACCAGGCCGTGTACCCTCTGCAGCGGCGGCCCCTGGTAGTCCGCACAGGTGCTCCCT 1381
||..||.||.|||||||||||||||||.|||||.||.||||||||.||||||||.|||||.|||||.|||||||
Sbjct 1923 CACTCATCCGCTCATGTACCAGGCCGTCTACCCGCTCCAGCGGCGACCCCTGGTGGTCCGTACAGGCGCTCCCT 1996
Query 1382 ACCGCCTTACCACTATTGCCGTGGACCAGGTGGATGCAGCCGACGGGCGCTATGAGGTGCTT------------ 1443
|||||||.||||||.|.||.||||||||||||||||||||.||.||.|||||||||...|.|
Sbjct 1997 ACCGCCTCACCACTGTCGCTGTGGACCAGGTGGATGCAGCTGATGGACGCTATGAGCATCCTCAGCCCCACTGA 2070
Query 1444 -TTCCTG---GGC-----ACAGACCGCGGGACAGTGCAGAAGGTCATTGTGCTGCCCAAGGATGACCAGGAGAT 1508
.||||| ||| .||||||||||||||||||||||||||||.||||||||||||||.|||||||||.|
Sbjct 2071 GGTCCTGCCCGGCCCGTTCCAGACCGCGGGACAGTGCAGAAGGTCATCGTGCTGCCCAAGGACGACCAGGAGGT 2144
Query 1509 GGAGGAGCTCATGCTGGAGGAGGTGGAGGTCTTCAAGGATCCAGCACCCGTCAAGACCATGACCATCTCTTCTA 1582
|||.|||||.|||||.|||||.|||||||||||||||||.||||||||.||.||||||||||||||||||||.|
Sbjct 2145 GGAAGAGCTGATGCTAGAGGAAGTGGAGGTCTTCAAGGAACCAGCACCTGTTAAGACCATGACCATCTCTTCCA 2218
Query 1583 AGAGGCAACAACTCTACGTGGCGTCAGCCGTGGGTGTCACACACCTGAGCCTGCACCGCTGCCAGGCGTATGGG 1656
|||||
Sbjct 2219 AGAGG--------------------------------------------------------------------- 2223
Query 1657 GCTGCCTGTGCTGACTGCTGCCTTGCCCGGGACCCTTACTGTGCCTGGGATGGCCAGGCCTGCTCCCGCTATAC 1730
Sbjct 2224 -------------------------------------------------------------------------- 2223
Query 1731 AGCATCCTCCAAGAGGCGGAGCCGCCGGCAGGACGTCCGGCACGGAAACCCCATCAGGCAGTGCCGTGGGTTCA 1804
Sbjct 2224 -------------------------------------------------------------------------- 2223
Query 1805 ACTCCAATGCCAACAAGAATGCCGTGGAGTCTGTGCAGTATGGCGTGGCCGGCAGCGCAGCCTTCCTTGAGTGC 1878
Sbjct 2224 -------------------------------------------------------------------------- 2223
Query 1879 CAGCCCCGCTCGCCCCAAGCCACTGTTAAGTGGCTGTTCCAGCGAGATCCTGGTGACCGGCGCCGAGAGATTCG 1952
Sbjct 2224 -------------------------------------------------------------------------- 2223
Query 1953 TGCAGAGGACCGCTTCCTGCGCACAGAGCAGGGCTTGTTGCTCCGTGCACTGCAGCTCAGCGATCGTGGCCTCT 2026
Sbjct 2224 -------------------------------------------------------------------------- 2223
Query 2027 ACTCCTGCACAGCCACTGAGAACAACTTTAAGCACGTCGTCACACGAGTGCAGCTGCATGTACTGGGCCGGGAC 2100
Sbjct 2224 -------------------------------------------------------------------------- 2223
Query 2101 GCCGTCCATGCTGCCCTCTTCCCACCACTGTCCATGAGCGCCCCGCCACCCCCAGGCGCAGGCCCCCCAACGCC 2174
Sbjct 2224 -------------------------------------------------------------------------- 2223
Query 2175 TCCTTACCAGGAGTTAGCCCAGCTGCTGGCCCAGCCAGAAGTGGGCCTCATCCACCAGTACTGCCAGGGTTACT 2248
Sbjct 2224 -------------------------------------------------------------------------- 2223
Query 2249 GGCGCCATGTGCCCCCCAGCCCCAGGGAGGCTCCAGGGGCACCCCGGTCTCCTGAGCCCCAGGACCAGAAAAAG 2322
Sbjct 2224 -------------------------------------------------------------------------- 2223
Query 2323 CCCCGGAACCGCCGGCACCACCCTCCGGACACA 2355
Sbjct 2224 --------------------------------- 2223
