Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07023
- Subject:
- XM_017315470.2
- Aligned Length:
- 1940
- Identities:
- 904
- Gaps:
- 862
Alignment
Query 1 ATGGCCAGCAGCGGCATG-GCT---GACAGCGCCAACCACCTGCCCTTCTTTTTCGGCAACATCACCCGGGAGG 70
||| ||||.|.| ||| ||||||||||||||||||.|||.||||||.|||||||||||||||||.|
Sbjct 1 ATG-------GCGGGAAGTGCTGTGGACAGCGCCAACCACCTGACCTACTTTTTTGGCAACATCACCCGGGAAG 67
Query 71 AGGCAGAAGATTACCTGGTCCAGGGGGGCATGAGTGATGGGCTTTATTTGCTGCGCCAGAGCCGCAACTACCTG 144
||||.|||||.||||||||||||||.|||||||..||||||||.||..||||.||||||||||||||.||||||
Sbjct 68 AGGCTGAAGACTACCTGGTCCAGGGAGGCATGACCGATGGGCTCTACCTGCTACGCCAGAGCCGCAATTACCTG 141
Query 145 GGTGGCTTCGCCCTGTCCGTGGCCCACGGGAGGAAGGCACACCACTACACCATCGAGCGGGAGCTGAATGGCAC 218
|||||.||.||..||||.|||||.|||...|||||||||||||||||||||||||||.||||.||.||||||||
Sbjct 142 GGTGGTTTTGCTTTGTCGGTGGCTCACAACAGGAAGGCACACCACTACACCATCGAGAGGGAACTTAATGGCAC 215
Query 219 CTACGCCATCGCCGGTGGCAGGACCCATGCCAGCCCCGCCGACCTCTGCCACTACCACTCCCAGGAGTCTGATG 292
||||||||||.||||.||||||.|||||||||||||.||.|||||||||||.||||||||||||||..||||||
Sbjct 216 CTACGCCATCTCCGGGGGCAGGGCCCATGCCAGCCCAGCAGACCTCTGCCATTACCACTCCCAGGAACCTGATG 289
Query 293 GCCTGGTCTGCCTCCTCAAGAAGCCCTTCAACCGGCCCCAAGGGGTGCAGCCCAAGACTGGGCCCTTTGAGGAT 366
||||..||||||||||.||||||||||||||||||||||..||.||.|||||||||||.||.|||||||||||.
Sbjct 290 GCCTTATCTGCCTCCTTAAGAAGCCCTTCAACCGGCCCCCGGGAGTACAGCCCAAGACCGGACCCTTTGAGGAC 363
Query 367 TTGAAGGAAAACCTCATCAGGGAATATGTGAAGCAGACATGGAACCTGCAGGGTCAGGCTCTGGAGCAGGCCAT 440
.|||||||.|||||||||||||||||||||||.|||||.||||||||.|||||.||||||||||||||.|||||
Sbjct 364 CTGAAGGAGAACCTCATCAGGGAATATGTGAAACAGACCTGGAACCTTCAGGGCCAGGCTCTGGAGCAAGCCAT 437
Query 441 CATCAGTCAGAAGCCTCAGCTGGAGAAGCTGATCGCTACCACAGCCCATGAAAAAATGCCTTGGTTCCATGGAA 514
||||||.||||||||.||||||||||||||||||||.|||||.||||||||.||.|||||.|||||||||||.|
Sbjct 438 CATCAGCCAGAAGCCCCAGCTGGAGAAGCTGATCGCCACCACGGCCCATGAGAAGATGCCCTGGTTCCATGGCA 511
Query 515 AAATCTCTCGGGAAGAATCTGAGCAAATTGTCCTGATAGGATCAAAGACAAATGGAAAGTTCCTGATCCGAGCC 588
|.|||||..|.||.|||||.|||||.|..|||||.|||||.||||||||.||||||||.|||||||||.|.|||
Sbjct 512 ACATCTCCAGAGATGAATCAGAGCAGACGGTCCTCATAGGGTCAAAGACCAATGGAAAATTCCTGATCAGGGCC 585
Query 589 AGAGACAACAACGGCTCCTACGCCCTGTGCCTGCTGCACGAAGGGAAGGTGCTGCACTATCGCATCGACAAAGA 662
||||||||||.|||||||||.||.|||||||||||||||||||||||.||..|||||||.|||||.||||..||
Sbjct 586 AGAGACAACAGCGGCTCCTATGCTCTGTGCCTGCTGCACGAAGGGAAAGTATTGCACTACCGCATTGACAGGGA 659
Query 663 CAAGACAGGGAAGCTCTCCATCCCCGAGGGAAAGAAGTTCGACACGCTCTGGCAGCTAGTCGAGCATTATTCTT 736
||||||.||||||||||||||.||.|||||.||||||||.|||||.||||||||||||||.||.|||||.||||
Sbjct 660 CAAGACCGGGAAGCTCTCCATTCCTGAGGGGAAGAAGTTTGACACCCTCTGGCAGCTAGTGGAACATTACTCTT 733
Query 737 ATAAAGCAGATGGTTTGTTAAGAGTTCTTACTGTCCCATGTCAAAAAATCGGCACACAGGGAAATGTTAATTTT 810
|.||..|||||||..|..|||||||.||.||.||.|||||.|||||.||.||..||||| |||
Sbjct 734 ACAAGCCAGATGGGCTACTAAGAGTCCTCACGGTACCATGCCAAAAGATTGGTGCACAG----ATG-------- 795
Query 811 GGAGGCCGTCCACAACTTCCAGGTTCCCATCCTGCGACTTGGTCAGCGGGTGGAATAATCTCAAGAATCAAATC 884
||||..|||..|...|||..|.|||||||.|.||||||||||.|||||||||||||||||||.||||||||
Sbjct 796 ---GGCCACCCAGGAAGCCCAAATGCCCATCCCGTGACTTGGTCACCGGGTGGAATAATCTCAAGGATCAAATC 866
Query 885 ATACTCCTTCCCAAAGCCTGGCCACAGAAAGTCCTCCCCTGCCCAAGGGAACCGGCAAGAGAGTACTGTGTCAT 958
.|||||||||||||||||||||||||.|||| ||.||.|
Sbjct 867 CTACTCCTTCCCAAAGCCTGGCCACAAAAAG------------CATGGAA------------------------ 904
Query 959 TCAATCCGTATGAGCCAGAACTTGCACCCTGGGCTGCAGACA---AAGGCCCCCAGAGAGAAGCCC--TACCCA 1027
||||..|| |||.|||.||..|| || ||| ||||.||| |..|||
Sbjct 905 ---------ATGAAGCA-----------CTGAGCTACATCCACTTAA-------AGA-AGAATCCCAGTTTCCA 950
Query 1028 TGGACACAGAGGTGTACGAGAGCCCCTACGCGGACCCTGAGGAGATCAGGCCCAAGGAGGTTTACCTG-GACCG 1100
.|| |||||| ||| |.|..|.|| .|||..||| .|.||
Sbjct 951 AGG-----GAGGTG----------CCT----------------GTTTTGTCC-------TTTTGTCTGTCATCG 986
Query 1101 AAAGCTGCTGACGCTGGAAGACAAAGAACTGG---GCT-CTGGTAATTTTGGAACTGTGAAAAAGGGCTACTAC 1170
|||||.|| || ||| |||...||.|.|| |||||| ||.||.|
Sbjct 987 ------------------AGACATAG----GGGTAGCTCCTGTCTATCTGGG---TGTGAA------CTCCTTC 1029
Query 1171 CAAATGAAAAAAGTTGTGAAAACCGTGGCTGTGAAAATACTGAAAAACGAGG---------CCAATGACCCC-- 1233
|| |..||||.| ||.||.| |.|| |||.|||.|||
Sbjct 1030 CA----------------------GGAGCTGGG---ATGCTCA-----GGGGTCCCTCCCCCCACTGATCCCTA 1073
Query 1234 ---GCTCTTAAAGAT-------GAGTTATTAGCAGAAGCAAATGTCATGCAGCAGCTGGACAACCCGTACATCG 1297
.||.|| ||| .|.||.||| ||.|..||.||.
Sbjct 1074 CGTCCTTTT---GATATACTGCCATTTTTTA----AAACTGATTTCC--------------------------- 1113
Query 1298 TGCGCATGATCGGGATATGCGAGGCCGAGTCCTGGATGCTAGTTATGGAGATGGCAGAACTTGGTCCCCTCAAT 1371
Sbjct 1114 -------------------------------------------------------------------------- 1113
Query 1372 AAGTATTTGCAGCAGAACAGACATGTCAAGGATAAGAACATCATAGAACTGGTTCATCAGGTTTCCATGGGCAT 1445
Sbjct 1114 -------------------------------------------------------------------------- 1113
Query 1446 GAAGTACTTGGAGGAGAGCAATTTTGTGCACAGAGATCTGGCTGCAAGAAATGTGTTGCTAGTTACCCAACATT 1519
Sbjct 1114 -------------------------------------------------------------------------- 1113
Query 1520 ATGCCAAGATCAGTGATTTCGGACTCTCCAAAGCACTGCGTGCTGATGAAAACTACTACAAGGCCCAGACCCAT 1593
Sbjct 1114 -------------------------------------------------------------------------- 1113
Query 1594 GGAAAGTGGCCTGTCAAGTGGTACGCTCCGGAATGCATCAACTACTACAAGTTCTCCAGCAAAAGCGATGTCTG 1667
Sbjct 1114 -------------------------------------------------------------------------- 1113
Query 1668 GAGCTTTGGAGTGTTGATGTGGGAAGCATTCTCCTATGGGCAGAAGCCATATCGAGGGATGAAAGGAAGTGAAG 1741
Sbjct 1114 -------------------------------------------------------------------------- 1113
Query 1742 TCACCGCTATGTTAGAGAAAGGAGAGCGGATGGGGTGCCCTGCAGGGTGTCCAAGAGAGATGTACGATCTCATG 1815
Sbjct 1114 -------------------------------------------------------------------------- 1113
Query 1816 AATCTGTGCTGGACATACGATGTGGAAAACAGGCCCGGATTCGCAGCAGTGGAACTGCGGCTGCGCAATTACTA 1889
Sbjct 1114 -------------------------------------------------------------------------- 1113
Query 1890 CTATGACGTGGTGAAC 1905
Sbjct 1114 ---------------- 1113
