Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_07088
• Subject: NM_001276698.2
• Aligned Length: 1188
• Identities: 529
• Gaps: 651

Alignment

Query    1  ATGGAGGAGCCGCAGTCAGATCCTAGCGTCGAGCCCCCTCTGAGTCAGGAAACATTTTCAGACCTATGGAAACT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ACTTCCTGAAAACAACGTTCTGTCCCCCTTGCCGTCCCAAGCAATGGATGATTTGATGCTGTCCCCGGACGATA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTGAACAATGGTTCACTGAAGACCCAGGTCCAGATGAAGCTCCCAGAATGCCAGAGGCTGCTCCCCGCGTGGCC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CCTGCACCAGCAGCTCCTACACCGGCGGCCCCTGCACCAGCCCCCTCCTGGCCCCTGTCATCTTCTGTCCCTTC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CCAGAAAACCTACCAGGGCAGCTACGGTTTCCGTCTGGGCTTCTTGCATTCTGGGACAGCCAAGTCTGTGACTT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GCACGTACTCCCCTGCCCTCAACAAGATGTTTTGCCAACTGGCCAAGACCTGCCCTGTGCAGCTGTGGGTTGAT  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  TCCACACCCCCGCCCGGCACCCGCGTCCGCGCCATGGCCATCTACAAGCAGTCACAGCACATGACGGAGGTTGT  518
                                             |||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ---------------------------------ATGGCCATCTACAAGCAGTCACAGCACATGACGGAGGTTGT  41

Query  519  GAGGCGCTGCCCCCACCATGAGCGCTGCTCAGATAGCGATGGTCTGGCCCCTCCTCAGCATCTTATCCGAGTGG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   42  GAGGCGCTGCCCCCACCATGAGCGCTGCTCAGATAGCGATGGTCTGGCCCCTCCTCAGCATCTTATCCGAGTGG  115

Query  593  AAGGAAATTTGCGTGTGGAGTATTTGGATGACAGAAACACTTTTCGACATAGTGTGGTGGTGCCCTATGAGCCG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  116  AAGGAAATTTGCGTGTGGAGTATTTGGATGACAGAAACACTTTTCGACATAGTGTGGTGGTGCCCTATGAGCCG  189

Query  667  CCTGAGGTTGGCTCTGACTGTACCACCATCCACTACAACTACATGTGTAACAGTTCCTGCATGGGCGGCATGAA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  190  CCTGAGGTTGGCTCTGACTGTACCACCATCCACTACAACTACATGTGTAACAGTTCCTGCATGGGCGGCATGAA  263

Query  741  CCGGAGGCCCATCCTCACCATCATCACACTGGAAGACTCCAGTGGTAATCTACTGGGACGGAACAGCTTTGAGG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  264  CCGGAGGCCCATCCTCACCATCATCACACTGGAAGACTCCAGTGGTAATCTACTGGGACGGAACAGCTTTGAGG  337

Query  815  TGCGTGTTTGTGCCTGTGCTGGGAGAGACCGGCGCACAGAGGAAGAGAATCTCCGCAAGAAAGGGGAGCCTCAC  888
            |||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  338  TGCGTGTTTGTGCCTGTCCTGGGAGAGACCGGCGCACAGAGGAAGAGAATCTCCGCAAGAAAGGGGAGCCTCAC  411

Query  889  CACGAGCTGCCCCCAGGGAGCACTAAGCGAGCACTGCCCAACAACACCAGCTCCTCTCCCCAGCCAAAGAAGAA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  412  CACGAGCTGCCCCCAGGGAGCACTAAGCGAGCACTGCCCAACAACACCAGCTCCTCTCCCCAGCCAAAGAAGAA  485

Query  963  ACCACTGGATGGAGAATATTTCACCCTTCAGATCCGTGGGCGTGAGC-GCTTCGAGA--------TGTTCCGAG  1027
            ||||||||||||||||||||||||||||||       ||.|..||.| ||||..|.|        |||      
Sbjct  486  ACCACTGGATGGAGAATATTTCACCCTTCA-------GGACCAGACCAGCTTTCAAAAAGAAAATTGT------  546

Query 1028  AGCTGAATGAGGCCTTGGAACTCAAGGATGCCCAGGCTGGGAAGGAGCCAGGGGGGAGCAGGGCTCACTCCAGC  1101
                                                                                      
Sbjct  547  --------------------------------------------------------------------------  546

Query 1102  CACCTGAAGTCCAAAAAGGGTCAGTCTACCTCCCGCCATAAAAAACTCATGTTCAAGACAGAAGGGCCTGACTC  1175
                                                                                      
Sbjct  547  --------------------------------------------------------------------------  546

Query 1176  AGAC  1179
                
Sbjct  547  ----  546